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FFCP PHASE1:Mm9::chr14:35633026..35633042,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14803
|EntrezGene=14803
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q61627
|UniProt=Q61627
|association_with_transcript=15bp_to_ENSMUST00000043349_5end
|association_with_transcript=15bp_to_ENSMUST00000043349_5end
|cluster_id=chr14:35633026..35633042,+
|description=CAGE_peak_2_at_Grid1_5end
|description=CAGE_peak_2_at_Grid1_5end
|id=chr14:35633026..35633042,+
|id=chr14:35633026..35633042,+
|ontology_enrichment_celltype=CL:0000117!2.52e-15!23;CL:0000337!2.52e-15!23;CL:0000540!3.62e-15!33;CL:0000047!3.62e-15!33;CL:0000031!3.62e-15!33;CL:0000404!3.62e-15!33;CL:0000221!3.19e-13!44;CL:0000133!3.19e-13!44;CL:0002319!3.71e-13!43;CL:0000393!1.97e-10!39;CL:0000211!1.97e-10!39;CL:0000055!5.56e-09!50
|ontology_enrichment_celltype=CL:0000117!2.52e-15!23;CL:0000337!2.52e-15!23;CL:0000540!3.62e-15!33;CL:0000047!3.62e-15!33;CL:0000031!3.62e-15!33;CL:0000404!3.62e-15!33;CL:0000221!3.19e-13!44;CL:0000133!3.19e-13!44;CL:0002319!3.71e-13!43;CL:0000393!1.97e-10!39;CL:0000211!1.97e-10!39;CL:0000055!5.56e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,9.32e-20,23;CL:0000337,9.32e-20,23;CL:0000540,7.75e-15,33;CL:0000047,7.75e-15,33;CL:0000031,7.75e-15,33;CL:0000404,7.75e-15,33;CL:0000393,3.71e-11,39;CL:0000211,3.71e-11,39;CL:0002319,6.84e-11,43;CL:0000221,1.95e-10,44;CL:0000133,1.95e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.98e-32!73;UBERON:0005743!5.98e-32!73;UBERON:0000073!1.80e-31!75;UBERON:0001016!1.80e-31!75;UBERON:0004121!5.97e-27!102;UBERON:0000924!5.97e-27!102;UBERON:0006601!5.97e-27!102;UBERON:0002346!9.15e-27!71;UBERON:0003075!9.15e-27!71;UBERON:0007284!9.15e-27!71;UBERON:0000033!5.41e-26!63;UBERON:0001049!9.77e-26!52;UBERON:0005068!9.77e-26!52;UBERON:0006241!9.77e-26!52;UBERON:0007135!9.77e-26!52;UBERON:0000955!1.57e-23!50;UBERON:0006238!1.57e-23!50;UBERON:0003056!4.67e-23!49;UBERON:0002616!6.45e-23!49;UBERON:0003080!1.39e-19!40;UBERON:0002020!3.36e-19!34;UBERON:0002780!6.07e-19!39;UBERON:0001890!6.07e-19!39;UBERON:0006240!6.07e-19!39;UBERON:0002791!3.11e-15!29;UBERON:0003528!3.11e-15!29;UBERON:0001893!3.11e-15!29;UBERON:0007811!2.13e-14!86;UBERON:0000153!5.66e-14!94;UBERON:0000956!5.26e-10!21;UBERON:0001869!5.26e-10!21;UBERON:0000203!5.26e-10!21;UBERON:0002619!9.52e-09!17;UBERON:0002021!2.17e-07!10;UBERON:0000411!2.17e-07!10;UBERON:0001950!2.17e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.29e-34,64;UBERON:0003075,1.29e-34,64;UBERON:0007284,1.29e-34,64;UBERON:0001017,7.19e-34,73;UBERON:0000073,2.02e-33,54;UBERON:0001016,2.10e-32,75;UBERON:0001049,1.58e-31,52;UBERON:0005068,1.58e-31,52;UBERON:0006241,1.58e-31,52;UBERON:0007135,1.58e-31,52;UBERON:0004121,2.83e-30,95;UBERON:0000924,2.83e-30,95;UBERON:0006601,2.83e-30,95;UBERON:0010371,2.26e-29,73;UBERON:0003056,1.15e-27,49;UBERON:0000955,1.03e-25,47;UBERON:0006238,1.03e-25,47;UBERON:0002020,4.14e-25,34;UBERON:0002616,6.88e-25,46;UBERON:0003080,1.23e-23,40;UBERON:0002780,9.31e-23,39;UBERON:0001890,9.31e-23,39;UBERON:0006240,9.31e-23,39;UBERON:0003528,1.45e-19,29;UBERON:0002791,1.45e-19,29;UBERON:0001893,1.45e-19,29;UBERON:0010314,2.72e-19,92;UBERON:0000956,2.74e-12,21;UBERON:0001869,2.74e-12,21;UBERON:0000203,2.74e-12,21;UBERON:0002619,1.53e-11,17;UBERON:0002021,8.20e-10,10;UBERON:0000411,8.20e-10,10;UBERON:0001950,8.20e-10,10;UBERON:0002420,9.05e-09,8;UBERON:0007245,9.05e-09,8;UBERON:0010009,9.05e-09,8;UBERON:0010011,9.05e-09,8;UBERON:0000454,9.05e-09,8;UBERON:0003076,3.52e-08,12;UBERON:0003057,3.52e-08,12;UBERON:0002240,6.71e-08,6;UBERON:0005174,6.71e-08,6;UBERON:0001137,6.71e-08,6;UBERON:0001948,5.84e-07,5;UBERON:0002315,5.84e-07,5
|phase1_expression=4.32401887182944,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,6.06949382578793,5.28990979272033,10.775133859605,0,0,0,0,0,1.79760066311043,0.384218305321555,1.55534418462716,0.810035629990144,2.10324961351382,12.2829923293636,9.718215801871,5.14461356702807,4.31304619582064,5.51531271966013,3.30347642998166,6.63974158042976,6.29786786350598,9.36392642884376,6.86157327018072,5.73004707612436,5.862842979029,4.50210088025344,6.1119299110724,16.2045722010517,13.3829379951157,12.1159639786445,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,3.22058876712702,3.97948742945565,0,0,0,0,5.09288173976397,5.03250663100489,5.6544458450789,6.25767552692195,6.13717097592793,4.36354893575076,6.16516799657479,0.611036183101898,0,0,0.420883711772948,1.56144531555244,1.60931473103431,1.80062129805349,3.31550599238573,5.30684693380357,2.8185018462667,3.5606655332697,3.10444044886819,0,0.378212160335639,0.175951124163949,0.219195732427575,1.39023624612799,0.696504333044333,0.411564272815887,0.59710280045548,0,0,0,0.828503090142008,0,0.720248245844059,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,4.6263788684108,4.6307075570678,0,0,1.49301775374664,2.32236671860439,0.38660238396628,0.403367049246685,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.456994050438915,0,0.814605311381257,0.969762435838129,1.05203729835478,1.58091342810643,0.295220295959204,0.784993639206874,0.616985819609003,0,0.500535317148282,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,4.33486592967038,4.33683240391152,0,0,0.94652465824877,0.390438744296638,1.72338718186239,0.238968797952552,0.668396022247182,0.566153061577665,0,2.92255857911312,0.790575555893047,4.4984984299053,0.283880170416537,0.712262414669021,0.977321756121456,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,2.38307724027652,0.540183282093931,0.905510786479282,2.7863814554107,2.30542303734956,3.21063871683727,2.46823530903181,1.522324745573,0,0.42366414172764,0,0,0.322928853391811,0,0,0.164140899745061,0,6.11903496634682,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.86404272657441,0,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,5.64751842617067,7.36520378411483,5.72895513439397,5.15559547031063,4.7955776383945,4.5323633843382,7.42524750254986,4.05289082901798,4.53142408984205,3.62432218226274,0.103787347584177,3.19219898720825,1.70733605754134,2.91728060481953,1.25767897576789,1.2869045591501,2.889207461421,1.85431551515005,2.24643446714271,1.01078884705519,2.28131369901216,1.69763707247469,1.87283014939765,2.11283002936069,1.78049953762401,1.42888107384922,2.43357084484197,3.6652751888104,2.06042950401653,2.06078488188156,1.71434626192708,2.12970967391205,0.953744759789284,2.18019624948493,1.97629698872194,2.03075058940024,1.64635175585495,2.10455769150274,1.22223702461276,2.24456908663095,2.25406534435931,1.97008964751127,3.27384834535751,1.39443157067369,1.54325288784913,4.49659040288303,2.33931608445408,1.07435527024149,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=4.32401887182944,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,6.06949382578793,5.28990979272033,10.775133859605,0,0,0,0,0,1.79760066311043,0.384218305321555,1.55534418462716,0.810035629990144,2.10324961351382,12.2829923293636,9.718215801871,5.14461356702807,4.31304619582064,5.51531271966013,3.30347642998166,6.63974158042976,6.29786786350598,9.36392642884376,6.86157327018072,5.73004707612436,5.862842979029,4.50210088025344,6.1119299110724,16.2045722010517,13.3829379951157,12.1159639786445,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,3.22058876712702,3.97948742945565,0,0,0,0,5.09288173976397,5.03250663100489,5.6544458450789,6.25767552692195,6.13717097592793,4.36354893575076,6.16516799657479,0.611036183101898,0,0,0.420883711772948,1.56144531555244,1.60931473103431,1.80062129805349,3.31550599238573,5.30684693380357,2.8185018462667,3.5606655332697,3.10444044886819,0,0.378212160335639,0.175951124163949,0.219195732427575,1.39023624612799,0.696504333044333,0.411564272815887,0.59710280045548,0,0,0,0.828503090142008,0,0.720248245844059,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,4.6263788684108,4.6307075570678,0,0,1.49301775374664,2.32236671860439,0.38660238396628,0.403367049246685,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.456994050438915,0,0.814605311381257,0.969762435838129,1.05203729835478,1.58091342810643,0.295220295959204,0.784993639206874,0.616985819609003,0,0.500535317148282,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,4.33486592967038,4.33683240391152,0,0,0.94652465824877,0.390438744296638,1.72338718186239,0.238968797952552,0.668396022247182,0.566153061577665,0,2.92255857911312,0.790575555893047,4.4984984299053,0.283880170416537,0.712262414669021,0.977321756121456,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,2.38307724027652,0.540183282093931,0.905510786479282,2.7863814554107,2.30542303734956,3.21063871683727,2.46823530903181,1.522324745573,0,0.42366414172764,0,0,0.322928853391811,0,0,0.164140899745061,0,6.11903496634682,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.86404272657441,0,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,5.64751842617067,7.36520378411483,5.72895513439397,5.15559547031063,4.7955776383945,4.5323633843382,7.42524750254986,4.05289082901798,4.53142408984205,3.62432218226274,0.103787347584177,3.19219898720825,1.70733605754134,2.91728060481953,1.25767897576789,1.2869045591501,2.889207461421,1.85431551515005,2.24643446714271,1.01078884705519,2.28131369901216,1.69763707247469,1.87283014939765,2.11283002936069,1.78049953762401,1.42888107384922,2.43357084484197,3.6652751888104,2.06042950401653,2.06078488188156,1.71434626192708,2.12970967391205,0.953744759789284,2.18019624948493,1.97629698872194,2.03075058940024,1.64635175585495,2.10455769150274,1.22223702461276,2.24456908663095,2.25406534435931,1.97008964751127,3.27384834535751,1.39443157067369,1.54325288784913,4.49659040288303,2.33931608445408,1.07435527024149,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p2@Grid1
|short_description=p2@Grid1
}}
}}

Latest revision as of 22:32, 25 September 2015

Short description:p2@Grid1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Grid1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 15bp_to_ENSMUST00000043349_5end
EntrezGene:Grid1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Grid1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.07
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F15.65
cortex, adult.CNhs10473.12-14D56.26
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C65.31
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.58
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.32e-2023
neuroblast (sensu Vertebrata)9.32e-2023
neuron7.75e-1533
neuronal stem cell7.75e-1533
neuroblast7.75e-1533
electrically signaling cell7.75e-1533
electrically responsive cell3.71e-1139
electrically active cell3.71e-1139
neural cell6.84e-1143
ectodermal cell1.95e-1044
neurectodermal cell1.95e-1044

Uber anatomy
Ontology termp-valuen
neurectoderm1.29e-3464
neural plate1.29e-3464
presumptive neural plate1.29e-3464
central nervous system7.19e-3473
regional part of nervous system2.02e-3354
nervous system2.10e-3275
neural tube1.58e-3152
neural rod1.58e-3152
future spinal cord1.58e-3152
neural keel1.58e-3152
ectoderm-derived structure2.83e-3095
ectoderm2.83e-3095
presumptive ectoderm2.83e-3095
ecto-epithelium2.26e-2973
pre-chordal neural plate1.15e-2749
brain1.03e-2547
future brain1.03e-2547
gray matter4.14e-2534
regional part of brain6.88e-2546
anterior neural tube1.23e-2340
regional part of forebrain9.31e-2339
forebrain9.31e-2339
future forebrain9.31e-2339
brain grey matter1.45e-1929
regional part of telencephalon1.45e-1929
telencephalon1.45e-1929
structure with developmental contribution from neural crest2.72e-1992
cerebral cortex2.74e-1221
cerebral hemisphere2.74e-1221
pallium2.74e-1221
regional part of cerebral cortex1.53e-1117
occipital lobe8.20e-1010
visual cortex8.20e-1010
neocortex8.20e-1010
basal ganglion9.05e-098
nuclear complex of neuraxis9.05e-098
aggregate regional part of brain9.05e-098
collection of basal ganglia9.05e-098
cerebral subcortex9.05e-098
posterior neural tube3.52e-0812
chordal neural plate3.52e-0812
spinal cord6.71e-086
dorsal region element6.71e-086
dorsum6.71e-086
regional part of spinal cord5.84e-075
gray matter of spinal cord5.84e-075
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