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FFCP PHASE1:Mm9::chr7:134119793..134119811,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=52858
|EntrezGene=52858
|HGNC=
|HGNC=
|MCL_coexpression_id=240
|TSSclassifier=NA
|UniProt=Q8VDP6
|UniProt=Q8VDP6
|association_with_transcript=-51bp_to_ENSMUST00000032920,NM_026638,uc009jtv.1,uc012fty.1,uc012ftz.1_5end
|association_with_transcript=-51bp_to_ENSMUST00000032920,NM_026638,uc009jtv.1,uc012fty.1,uc012ftz.1_5end
|cluster_id=chr7:134119793..134119811,+
|description=CAGE_peak_6_at_Cdipt_5end
|description=CAGE_peak_6_at_Cdipt_5end
|id=chr7:134119793..134119811,+
|id=chr7:134119793..134119811,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002321,8.76e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.31e-15!75;UBERON:0001016!5.31e-15!75;UBERON:0001017!9.44e-15!73;UBERON:0005743!9.44e-15!73;UBERON:0001049!3.69e-13!52;UBERON:0005068!3.69e-13!52;UBERON:0006241!3.69e-13!52;UBERON:0007135!3.69e-13!52;UBERON:0002020!1.57e-12!34;UBERON:0000955!2.49e-12!50;UBERON:0006238!2.49e-12!50;UBERON:0002616!5.59e-12!49;UBERON:0002791!1.65e-10!29;UBERON:0003528!1.65e-10!29;UBERON:0001893!1.65e-10!29;UBERON:0003080!1.28e-09!40;UBERON:0002780!2.82e-09!39;UBERON:0001890!2.82e-09!39;UBERON:0006240!2.82e-09!39;UBERON:0000956!6.48e-09!21;UBERON:0001869!6.48e-09!21;UBERON:0000203!6.48e-09!21;UBERON:0002619!2.39e-08!17;UBERON:0002346!2.48e-08!71;UBERON:0003075!2.48e-08!71;UBERON:0007284!2.48e-08!71;UBERON:0002021!8.60e-08!10;UBERON:0000411!8.60e-08!10;UBERON:0001950!8.60e-08!10;UBERON:0004121!2.30e-07!102;UBERON:0000924!2.30e-07!102;UBERON:0006601!2.30e-07!102;UBERON:0000033!9.58e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.44e-14,73;UBERON:0001016,3.68e-14,75;UBERON:0000073,2.05e-13,54;UBERON:0002020,4.84e-13,34;UBERON:0001049,2.19e-12,52;UBERON:0005068,2.19e-12,52;UBERON:0006241,2.19e-12,52;UBERON:0007135,2.19e-12,52;UBERON:0000160,1.08e-10,31;UBERON:0003528,1.80e-10,29;UBERON:0002791,1.80e-10,29;UBERON:0001893,1.80e-10,29;UBERON:0000955,4.87e-10,47;UBERON:0006238,4.87e-10,47;UBERON:0002021,7.39e-10,10;UBERON:0000411,7.39e-10,10;UBERON:0001950,7.39e-10,10;UBERON:0002616,1.25e-09,46;UBERON:0000956,2.12e-09,21;UBERON:0001869,2.12e-09,21;UBERON:0000203,2.12e-09,21;UBERON:0002346,2.57e-09,64;UBERON:0003075,2.57e-09,64;UBERON:0007284,2.57e-09,64;UBERON:0002619,3.24e-09,17;UBERON:0004121,1.10e-08,95;UBERON:0000924,1.10e-08,95;UBERON:0006601,1.10e-08,95;UBERON:0003080,2.37e-08,40;UBERON:0002780,5.98e-08,39;UBERON:0001890,5.98e-08,39;UBERON:0006240,5.98e-08,39;UBERON:0000344,2.26e-07,15
|phase1_expression=0.480446541314382,8.37540978334467,11.8299802241279,9.98131897312539,7.51343594919521,2.35030980676646,3.27057696833736,0.129123323441576,0.140788722151667,0,0.171217968225505,0.239316476986009,0.342401459862411,0.34968160967599,0,0.809901069559304,0,0,0.137114433605739,0.42438965179803,1.44573593256819,0.397163804803541,1.04479915655574,7.99962113967033,10.782236210157,4.01962374880514,8.61523992318149,6.03319451520489,22.9928337542212,13.8616571367962,9.5344119581781,1.90509202037889,3.07532393792285,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0,2.14024590558481,1.92616169317078,1.10128051297009,3.9119567217402,1.09012578190223,1.97717564461025,1.36100929351998,1.67983705950435,4.31257693094915,0,0,0,2.57259436035947,0.286533439938757,1.03134418455488,1.82084814773638,1.5869729378161,1.90149421051854,1.0165335962074,3.55717918444456,2.2497492932035,6.92206453796882,2.1314403448383,0.299600110518405,2.30530983192933,1.03689612308478,1.62007125998029,0.841299845405528,3.99911378165325,3.09215957332259,0.734944795289724,1.34183659425531,0.919218786610021,3.30347642998166,2.80912143787413,3.22573719838111,0.791317726381163,0.823388792421687,1.04182674111352,2.51264699101243,2.8138130501584,2.29197371665215,2.35702868378934,3.84403538157578,3.35519002485541,0.908714319998209,1.28471652181535,0.289864488701678,0,0.679971333707751,0,0,0,1.68533304158102,0.852151612890289,0.779358013808606,1.06001872353102,0,1.28326477414318,0,0,2.16491041011214,1.26679932737549,2.52762222507392,2.16949371466214,0,0,0.346970653532272,0.913396434936424,1.15307748628029,0.753613202763113,0.587943535678524,0.753999547978053,8.40462890296871,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,3.35114730901528,6.64188343542338,1.07833612055328,1.19980546198682,0.508280908292259,2.69623150928681,5.94750783664214,3.76963056338593,9.73416193076748,10.4843337505436,2.90903262383384,3.89379031362618,1.12023300235348,0.373220911830279,1.26361379216837,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.204109497453984,0.640568601424249,0.562210347358373,1.03481348295606,0.646703978798527,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.823128545631774,0.199034266818493,0,1.54408744268829,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,6.30869845692382,2.16099685996497,10.9038198384653,1.32225283331772,0.639864751605702,0.696710015581316,0.644337306610467,1.00841762311671,2.2237804384487,5.32631753115166,9.49058123089023,5.92916237006439,4.02136334080431,3.58121649674071,4.28920991662064,7.19055526923377,5.18731319699266,13.7407478545513,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.189709611372772,0.738050739898011,0,0.493588655687202,0,1.00107063429656,0.393117990226406,0.899448449539415,0.811440485554012,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.538192240565737,0,0.923765950833023,0.37898282354097,0.325929952884052,0,0.234690248288502,1.00503754465089,0.476087281772027,0.780534591431195,0.157635144106191,1.10732344824387,0.318909537314974,0.655453258862952,0.518054945597687,0.867894351489069,3.01582567878545,1.08781136763742,0,0,2.0871576698413,1.75817529888305,1.80328439914343,0.504941854408746,0,1.56175497718655,2.15423397732799,0.477937595905104,0.445597348164788,0.566153061577665,1.21443210502468,1.16902343164525,0.395287777946524,2.57057053137446,0.851640511249612,0.35613120733451,0.81443479676788,0.494910368917606,0,0,0.604647113929502,0.565815239267694,1.47650946440386,0,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,1.70219802876894,0.540183282093931,0.646793418913773,0.643011105094777,0.177340233642274,0.713475270408282,0.822745103010605,0.304464949114599,3.75474732901937,4.87213762986786,0.882113592219848,0.16488625294148,0.322928853391811,0.241251699712623,0.238744688006273,0.492422699235184,9.32738677215522,2.22510362412612,0,0.206386867963223,0.740778109478847,0.941842285023455,0.820165366326151,0.228778173206523,0.339956859987711,0.419854356970974,0.552799895217695,0.954670618015114,0.949007980743406,0,0.324016022465404,0.418176592028937,0,0.269728692769641,0.661227645802687,0.523511883968059,1.29614973291793,0,0,1.19613236835183,1.32366792365678,0.583353565032143,0.387479470433193,0.844780627453891,0.938857909166032,1.0416350787516,1.04859344425711,1.20792060413003,1.15212002503146,0,0.608175645870493,0.205421914329655,0.389762468933385,0.895133478337407,0.198681354781265,0,0.590758108698309,0.201932899896295,0.533447646584999,0.604957110821043,0.292373642219257,0.192423683280659,0.233753804363138,0,4.88369097422942,3.76798197759798,7.05115388729129,0.772758376128762,1.12609485270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|phase1_expression=0.480446541314382,8.37540978334467,11.8299802241279,9.98131897312539,7.51343594919521,2.35030980676646,3.27057696833736,0.129123323441576,0.140788722151667,0,0.171217968225505,0.239316476986009,0.342401459862411,0.34968160967599,0,0.809901069559304,0,0,0.137114433605739,0.42438965179803,1.44573593256819,0.397163804803541,1.04479915655574,7.99962113967033,10.782236210157,4.01962374880514,8.61523992318149,6.03319451520489,22.9928337542212,13.8616571367962,9.5344119581781,1.90509202037889,3.07532393792285,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0,2.14024590558481,1.92616169317078,1.10128051297009,3.9119567217402,1.09012578190223,1.97717564461025,1.36100929351998,1.67983705950435,4.31257693094915,0,0,0,2.57259436035947,0.286533439938757,1.03134418455488,1.82084814773638,1.5869729378161,1.90149421051854,1.0165335962074,3.55717918444456,2.2497492932035,6.92206453796882,2.1314403448383,0.299600110518405,2.30530983192933,1.03689612308478,1.62007125998029,0.841299845405528,3.99911378165325,3.09215957332259,0.734944795289724,1.34183659425531,0.919218786610021,3.30347642998166,2.80912143787413,3.22573719838111,0.791317726381163,0.823388792421687,1.04182674111352,2.51264699101243,2.8138130501584,2.29197371665215,2.35702868378934,3.84403538157578,3.35519002485541,0.908714319998209,1.28471652181535,0.289864488701678,0,0.679971333707751,0,0,0,1.68533304158102,0.852151612890289,0.779358013808606,1.06001872353102,0,1.28326477414318,0,0,2.16491041011214,1.26679932737549,2.52762222507392,2.16949371466214,0,0,0.346970653532272,0.913396434936424,1.15307748628029,0.753613202763113,0.587943535678524,0.753999547978053,8.40462890296871,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,3.35114730901528,6.64188343542338,1.07833612055328,1.19980546198682,0.508280908292259,2.69623150928681,5.94750783664214,3.76963056338593,9.73416193076748,10.4843337505436,2.90903262383384,3.89379031362618,1.12023300235348,0.373220911830279,1.26361379216837,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.204109497453984,0.640568601424249,0.562210347358373,1.03481348295606,0.646703978798527,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.823128545631774,0.199034266818493,0,1.54408744268829,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,6.30869845692382,2.16099685996497,10.9038198384653,1.32225283331772,0.639864751605702,0.696710015581316,0.644337306610467,1.00841762311671,2.2237804384487,5.32631753115166,9.49058123089023,5.92916237006439,4.02136334080431,3.58121649674071,4.28920991662064,7.19055526923377,5.18731319699266,13.7407478545513,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.189709611372772,0.738050739898011,0,0.493588655687202,0,1.00107063429656,0.393117990226406,0.899448449539415,0.811440485554012,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.538192240565737,0,0.923765950833023,0.37898282354097,0.325929952884052,0,0.234690248288502,1.00503754465089,0.476087281772027,0.780534591431195,0.157635144106191,1.10732344824387,0.318909537314974,0.655453258862952,0.518054945597687,0.867894351489069,3.01582567878545,1.08781136763742,0,0,2.0871576698413,1.75817529888305,1.80328439914343,0.504941854408746,0,1.56175497718655,2.15423397732799,0.477937595905104,0.445597348164788,0.566153061577665,1.21443210502468,1.16902343164525,0.395287777946524,2.57057053137446,0.851640511249612,0.35613120733451,0.81443479676788,0.494910368917606,0,0,0.604647113929502,0.565815239267694,1.47650946440386,0,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,1.70219802876894,0.540183282093931,0.646793418913773,0.643011105094777,0.177340233642274,0.713475270408282,0.822745103010605,0.304464949114599,3.75474732901937,4.87213762986786,0.882113592219848,0.16488625294148,0.322928853391811,0.241251699712623,0.238744688006273,0.492422699235184,9.32738677215522,2.22510362412612,0,0.206386867963223,0.740778109478847,0.941842285023455,0.820165366326151,0.228778173206523,0.339956859987711,0.419854356970974,0.552799895217695,0.954670618015114,0.949007980743406,0,0.324016022465404,0.418176592028937,0,0.269728692769641,0.661227645802687,0.523511883968059,1.29614973291793,0,0,1.19613236835183,1.32366792365678,0.583353565032143,0.387479470433193,0.844780627453891,0.938857909166032,1.0416350787516,1.04859344425711,1.20792060413003,1.15212002503146,0,0.608175645870493,0.205421914329655,0.389762468933385,0.895133478337407,0.198681354781265,0,0.590758108698309,0.201932899896295,0.533447646584999,0.604957110821043,0.292373642219257,0.192423683280659,0.233753804363138,0,4.88369097422942,3.76798197759798,7.05115388729129,0.772758376128762,1.12609485270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|short_description=p6@Cdipt
|short_description=p6@Cdipt
}}
}}

Latest revision as of 21:57, 25 September 2015

Short description:p6@Cdipt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Cdipt_5end
Coexpression cluster:MCL_coexpression_mm9:240
Association with transcript: -51bp_to_ENSMUST00000032920, NM_026638, uc009jtv.1, uc012fty.1, uc012ftz.1_5end
EntrezGene:Cdipt
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Cdipt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.98
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.78
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B922.99
Ileum epithelium, pool2.CNhs13232.10253-104C113.86
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A88.40
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I310.90
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F75.33
intestine, neonate N00.CNhs11126.644-26D19.49
intestine, neonate N01.CNhs11192.1322-23E95.93
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G113.74
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I19.33
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.05
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell8.76e-0770

Uber anatomy
Ontology termp-valuen
central nervous system2.44e-1473
nervous system3.68e-1475
regional part of nervous system2.05e-1354
gray matter4.84e-1334
neural tube2.19e-1252
neural rod2.19e-1252
future spinal cord2.19e-1252
neural keel2.19e-1252
intestine1.08e-1031
brain grey matter1.80e-1029
regional part of telencephalon1.80e-1029
telencephalon1.80e-1029
brain4.87e-1047
future brain4.87e-1047
occipital lobe7.39e-1010
visual cortex7.39e-1010
neocortex7.39e-1010
regional part of brain1.25e-0946
cerebral cortex2.12e-0921
cerebral hemisphere2.12e-0921
pallium2.12e-0921
neurectoderm2.57e-0964
neural plate2.57e-0964
presumptive neural plate2.57e-0964
regional part of cerebral cortex3.24e-0917
ectoderm-derived structure1.10e-0895
ectoderm1.10e-0895
presumptive ectoderm1.10e-0895
anterior neural tube2.37e-0840
regional part of forebrain5.98e-0839
forebrain5.98e-0839
future forebrain5.98e-0839
mucosa2.26e-0715
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