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FFCP PHASE1:Mm9::chr8:87298020..87298041,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:87298020..87298041,-
|DHSsupport=NA
|short_description=p9@Nfix
|DPIdataset=NA
|description=CAGE_peak_9_at_Nfix_5end
|association_with_transcript=226bp_to_ENSMUST00000063596,ENSMUST00000109762,NM_001081981,uc009mnc.1,uc009mnd.1_5end
|EntrezGene=18032
|EntrezGene=18032
|HGNC=
|HGNC=
|MCL_coexpression_id=1345
|TSSclassifier=NA
|UniProt=F6VBN9,Q3TYK3,E9PUH7,Q5CZY4
|UniProt=F6VBN9,Q3TYK3,E9PUH7,Q5CZY4
|association_with_transcript=226bp_to_ENSMUST00000063596,ENSMUST00000109762,NM_001081981,uc009mnc.1,uc009mnd.1_5end
|cluster_id=chr8:87298020..87298041,-
|description=CAGE_peak_9_at_Nfix_5end
|id=chr8:87298020..87298041,-
|ontology_enrichment_celltype=CL:0000055!7.09e-16!50;CL:0002319!7.34e-16!43;CL:0000221!4.25e-15!44;CL:0000133!4.25e-15!44;CL:0000393!9.64e-13!39;CL:0000211!9.64e-13!39;CL:0000540!4.59e-12!33;CL:0000047!4.59e-12!33;CL:0000031!4.59e-12!33;CL:0000404!4.59e-12!33;CL:0000117!5.92e-12!23;CL:0000337!5.92e-12!23;CL:0002321!3.83e-07!70;CL:0000220!3.83e-07!70;CL:0002453!5.70e-07!8
|ontology_enrichment_celltype_v019_2=CL:0002319,6.02e-19,43;CL:0000221,2.41e-18,44;CL:0000133,2.41e-18,44;CL:0000117,9.83e-16,23;CL:0000337,9.83e-16,23;CL:0000540,3.51e-12,33;CL:0000047,3.51e-12,33;CL:0000031,3.51e-12,33;CL:0000404,3.51e-12,33;CL:0000393,1.27e-10,39;CL:0000211,1.27e-10,39;CL:0002453,1.35e-10,8;CL:0002321,1.51e-10,70;CL:0000333,3.54e-08,10;CL:0000095,3.54e-08,10;CL:0000243,3.54e-08,10;CL:0000123,3.54e-08,10;CL:0000125,3.54e-08,10;CL:0000030,3.54e-08,10;CL:0000339,3.54e-08,10;CL:0000128,1.11e-07,6;CL:0000126,1.11e-07,6;CL:0000127,1.11e-07,6;CL:0002609,1.92e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.80e-29!73;UBERON:0005743!4.80e-29!73;UBERON:0000073!2.03e-27!75;UBERON:0001016!2.03e-27!75;UBERON:0001049!2.47e-23!52;UBERON:0005068!2.47e-23!52;UBERON:0006241!2.47e-23!52;UBERON:0007135!2.47e-23!52;UBERON:0002020!4.26e-23!34;UBERON:0004121!6.46e-23!102;UBERON:0000924!6.46e-23!102;UBERON:0006601!6.46e-23!102;UBERON:0002346!1.61e-20!71;UBERON:0003075!1.61e-20!71;UBERON:0007284!1.61e-20!71;UBERON:0002791!7.84e-20!29;UBERON:0003528!7.84e-20!29;UBERON:0001893!7.84e-20!29;UBERON:0000955!9.01e-20!50;UBERON:0006238!9.01e-20!50;UBERON:0002616!1.89e-19!49;UBERON:0000033!7.54e-19!63;UBERON:0003056!3.76e-18!49;UBERON:0003080!1.90e-17!40;UBERON:0002780!3.52e-17!39;UBERON:0001890!3.52e-17!39;UBERON:0006240!3.52e-17!39;UBERON:0000956!5.56e-16!21;UBERON:0001869!5.56e-16!21;UBERON:0000203!5.56e-16!21;UBERON:0002619!5.16e-13!17;UBERON:0000153!1.40e-10!94;UBERON:0007811!2.04e-09!86;UBERON:0002021!2.39e-08!10;UBERON:0000411!2.39e-08!10;UBERON:0001950!2.39e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.58e-40,34;UBERON:0001017,7.62e-34,73;UBERON:0003528,1.49e-33,29;UBERON:0002791,1.49e-33,29;UBERON:0001893,1.49e-33,29;UBERON:0001049,4.97e-33,52;UBERON:0005068,4.97e-33,52;UBERON:0006241,4.97e-33,52;UBERON:0007135,4.97e-33,52;UBERON:0001016,1.28e-32,75;UBERON:0000073,3.07e-31,54;UBERON:0000956,4.04e-29,21;UBERON:0001869,4.04e-29,21;UBERON:0000203,4.04e-29,21;UBERON:0002346,7.30e-28,64;UBERON:0003075,7.30e-28,64;UBERON:0007284,7.30e-28,64;UBERON:0002780,3.15e-27,39;UBERON:0001890,3.15e-27,39;UBERON:0006240,3.15e-27,39;UBERON:0003080,2.46e-26,40;UBERON:0002616,1.05e-25,46;UBERON:0004121,1.08e-25,95;UBERON:0000924,1.08e-25,95;UBERON:0006601,1.08e-25,95;UBERON:0000955,5.73e-25,47;UBERON:0006238,5.73e-25,47;UBERON:0010371,4.23e-23,73;UBERON:0002619,5.98e-23,17;UBERON:0003056,6.09e-23,49;UBERON:0010314,3.71e-17,92;UBERON:0002021,1.01e-15,10;UBERON:0000411,1.01e-15,10;UBERON:0001950,1.01e-15,10;UBERON:0000025,2.65e-10,114;UBERON:0004111,5.41e-09,122;UBERON:0001954,1.03e-08,7;UBERON:0003022,1.03e-08,7;UBERON:0002421,1.03e-08,7;UBERON:0000349,1.03e-08,7;UBERON:0002600,1.03e-08,7;UBERON:0002240,1.04e-08,6;UBERON:0005174,1.04e-08,6;UBERON:0001137,1.04e-08,6;UBERON:0001948,1.12e-07,5;UBERON:0002315,1.12e-07,5;UBERON:0003076,4.56e-07,12;UBERON:0003057,4.56e-07,12
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.202753862439029,0.917733760808408,0.782391344348039,4.14247797122848,4.17403747195497,5.05517737593137,4.05960622713551,10.062679505548,0,0,0,0,0.573066879877513,1.03134418455488,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,2.39680088414724,4.99483796918021,9.33206510776299,14.0406175864958,10.7265730289205,1.42825492201902,1.76694832761291,1.95985278743926,0.958454710182364,1.83843757322004,0,1.0214987046815,0.768032666281217,1.45074916503213,1.73826522844578,2.08365348222704,0.279182999001381,1.68828783009504,1.68078072554491,1.76777151284201,1.99320353118744,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.289198713839823,0.884610551949874,0.161766849947409,0,0,0,1.75668478206928,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,1.7591609295801,1.39059456153821,2.30143911597297,2.0778804455956,0.324482526135515,0.305518091550949,0.248813941220186,0,0.210441855886474,0.130120442962704,0.459804208866946,0.360124259610698,0,0.340182495756639,1.0249097622788,1.12442069471675,0.776110112217047,0,0.378212160335639,0.175951124163949,1.31517439456545,1.39023624612799,1.0447564995665,2.26360350048738,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,3.15434922846191,13.6863134464448,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,1.3114795630134,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,1.58115111178609,0.642642632843614,0,0.712262414669021,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.307435147943927,0.258428293168221,0,0,0,0,0,2.38307724027652,0,0,0,0,0.713475270408282,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0.322928853391811,0.241251699712623,0.119372344003136,0.328281799490123,0,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0.506868376472335,0.58678619322877,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,5.64751842617067,4.60325236507177,2.86447756719698,4.46818274093588,4.11049511862385,1.5107877947794,2.02506750069542,4.05289082901798,1.81256963593682,3.10656187051092,0,0.399024873401031,1.02440163452481,1.45864030240976,0.838452650511929,0.735374033800057,0.666740183404846,0.206035057238894,0.64183841918363,0.758091635291392,1.52087579934144,0.565879024158229,0.936415074698824,0.704276676453562,0.918967503289812,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.441596760403192,1.71434626192708,0.70990322463735,0.476872379894642,0.581385666529314,0.658765662907314,0.676916863133412,0.914639864363863,1.31534855718921,0.679020569229309,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.619747364743864,1.15743966588685,1.49886346762768,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.202753862439029,0.917733760808408,0.782391344348039,4.14247797122848,4.17403747195497,5.05517737593137,4.05960622713551,10.062679505548,0,0,0,0,0.573066879877513,1.03134418455488,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,2.39680088414724,4.99483796918021,9.33206510776299,14.0406175864958,10.7265730289205,1.42825492201902,1.76694832761291,1.95985278743926,0.958454710182364,1.83843757322004,0,1.0214987046815,0.768032666281217,1.45074916503213,1.73826522844578,2.08365348222704,0.279182999001381,1.68828783009504,1.68078072554491,1.76777151284201,1.99320353118744,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.289198713839823,0.884610551949874,0.161766849947409,0,0,0,1.75668478206928,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,1.7591609295801,1.39059456153821,2.30143911597297,2.0778804455956,0.324482526135515,0.305518091550949,0.248813941220186,0,0.210441855886474,0.130120442962704,0.459804208866946,0.360124259610698,0,0.340182495756639,1.0249097622788,1.12442069471675,0.776110112217047,0,0.378212160335639,0.175951124163949,1.31517439456545,1.39023624612799,1.0447564995665,2.26360350048738,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,3.15434922846191,13.6863134464448,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,1.3114795630134,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,1.58115111178609,0.642642632843614,0,0.712262414669021,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.307435147943927,0.258428293168221,0,0,0,0,0,2.38307724027652,0,0,0,0,0.713475270408282,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0.322928853391811,0.241251699712623,0.119372344003136,0.328281799490123,0,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0.506868376472335,0.58678619322877,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,5.64751842617067,4.60325236507177,2.86447756719698,4.46818274093588,4.11049511862385,1.5107877947794,2.02506750069542,4.05289082901798,1.81256963593682,3.10656187051092,0,0.399024873401031,1.02440163452481,1.45864030240976,0.838452650511929,0.735374033800057,0.666740183404846,0.206035057238894,0.64183841918363,0.758091635291392,1.52087579934144,0.565879024158229,0.936415074698824,0.704276676453562,0.918967503289812,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.441596760403192,1.71434626192708,0.70990322463735,0.476872379894642,0.581385666529314,0.658765662907314,0.676916863133412,0.914639864363863,1.31534855718921,0.679020569229309,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.619747364743864,1.15743966588685,1.49886346762768,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0
|short_description=p9@Nfix
}}
}}

Latest revision as of 21:50, 25 September 2015

Short description:p9@Nfix
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Nfix_5end
Coexpression cluster:MCL_coexpression_mm9:1345
Association with transcript: 226bp_to_ENSMUST00000063596, ENSMUST00000109762, NM_001081981, uc009mnc.1, uc009mnd.1_5end
EntrezGene:Nfix
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p9@Nfix

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.04
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G113.69
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter2.58e-4034
central nervous system7.62e-3473
brain grey matter1.49e-3329
regional part of telencephalon1.49e-3329
telencephalon1.49e-3329
neural tube4.97e-3352
neural rod4.97e-3352
future spinal cord4.97e-3352
neural keel4.97e-3352
nervous system1.28e-3275
regional part of nervous system3.07e-3154
cerebral cortex4.04e-2921
cerebral hemisphere4.04e-2921
pallium4.04e-2921
neurectoderm7.30e-2864
neural plate7.30e-2864
presumptive neural plate7.30e-2864
regional part of forebrain3.15e-2739
forebrain3.15e-2739
future forebrain3.15e-2739
anterior neural tube2.46e-2640
regional part of brain1.05e-2546
ectoderm-derived structure1.08e-2595
ectoderm1.08e-2595
presumptive ectoderm1.08e-2595
brain5.73e-2547
future brain5.73e-2547
ecto-epithelium4.23e-2373
regional part of cerebral cortex5.98e-2317
pre-chordal neural plate6.09e-2349
structure with developmental contribution from neural crest3.71e-1792
occipital lobe1.01e-1510
visual cortex1.01e-1510
neocortex1.01e-1510
tube2.65e-10114
anatomical conduit5.41e-09122
Ammon's horn1.03e-087
lobe parts of cerebral cortex1.03e-087
hippocampal formation1.03e-087
limbic system1.03e-087
limbic lobe1.03e-087
spinal cord1.04e-086
dorsal region element1.04e-086
dorsum1.04e-086
regional part of spinal cord1.12e-075
gray matter of spinal cord1.12e-075
posterior neural tube4.56e-0712
chordal neural plate4.56e-0712
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