FFCP PHASE1:Mm9::chr19:4711427..4711438,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20743 | |EntrezGene=20743 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q68FG2 | |UniProt=Q68FG2 | ||
|association_with_transcript=204bp_to_NM_021287,uc008gan.1_5end | |association_with_transcript=204bp_to_NM_021287,uc008gan.1_5end | ||
|cluster_id=chr19:4711427..4711438,+ | |||
|description=CAGE_peak_13_at_Spnb3_5end | |description=CAGE_peak_13_at_Spnb3_5end | ||
|id=chr19:4711427..4711438,+ | |id=chr19:4711427..4711438,+ | ||
|ontology_enrichment_celltype=CL:0000117!8.09e-24!23;CL:0000337!8.09e-24!23;CL:0000540!2.69e-14!33;CL:0000047!2.69e-14!33;CL:0000031!2.69e-14!33;CL:0000404!2.69e-14!33;CL:0002319!2.03e-11!43;CL:0000393!5.34e-11!39;CL:0000211!5.34e-11!39;CL:0000221!5.46e-11!44;CL:0000133!5.46e-11!44;CL:0000055!8.54e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.72e-27,23;CL:0000337,3.72e-27,23;CL:0000540,2.88e-18,33;CL:0000047,2.88e-18,33;CL:0000031,2.88e-18,33;CL:0000404,2.88e-18,33;CL:0000393,4.07e-15,39;CL:0000211,4.07e-15,39;CL:0002319,1.67e-13,43;CL:0000221,3.80e-13,44;CL:0000133,3.80e-13,44;CL:0002614,4.25e-13,3;CL:0000120,5.62e-13,3;CL:0002321,1.97e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.93e-29!52;UBERON:0005068!2.93e-29!52;UBERON:0006241!2.93e-29!52;UBERON:0007135!2.93e-29!52;UBERON:0000073!4.97e-29!75;UBERON:0001016!4.97e-29!75;UBERON:0000955!2.14e-27!50;UBERON:0006238!2.14e-27!50;UBERON:0001017!2.46e-27!73;UBERON:0005743!2.46e-27!73;UBERON:0002616!1.55e-26!49;UBERON:0002020!9.25e-26!34;UBERON:0000033!2.02e-25!63;UBERON:0004121!3.74e-25!102;UBERON:0000924!3.74e-25!102;UBERON:0006601!3.74e-25!102;UBERON:0002346!1.06e-23!71;UBERON:0003075!1.06e-23!71;UBERON:0007284!1.06e-23!71;UBERON:0002791!1.03e-20!29;UBERON:0003528!1.03e-20!29;UBERON:0001893!1.03e-20!29;UBERON:0003056!1.21e-20!49;UBERON:0003080!5.81e-20!40;UBERON:0002780!4.98e-19!39;UBERON:0001890!4.98e-19!39;UBERON:0006240!4.98e-19!39;UBERON:0007811!4.82e-15!86;UBERON:0000956!3.07e-14!21;UBERON:0001869!3.07e-14!21;UBERON:0000203!3.07e-14!21;UBERON:0000153!1.12e-12!94;UBERON:0002619!1.66e-10!17;UBERON:0003076!7.66e-10!12;UBERON:0003057!7.66e-10!12;UBERON:0002021!1.98e-09!10;UBERON:0000411!1.98e-09!10;UBERON:0001950!1.98e-09!10;UBERON:0002298!1.01e-08!6;UBERON:0000025!6.97e-08!114;UBERON:0002420!1.08e-07!8;UBERON:0007245!1.08e-07!8;UBERON:0010009!1.08e-07!8;UBERON:0010011!1.08e-07!8;UBERON:0000454!1.08e-07!8;UBERON:0002240!3.22e-07!6;UBERON:0005174!3.22e-07!6;UBERON:0001137!3.22e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.92e-24,54;UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0002616,2.89e-20,46;UBERON:0001049,4.90e-20,52;UBERON:0005068,4.90e-20,52;UBERON:0006241,4.90e-20,52;UBERON:0007135,4.90e-20,52;UBERON:0000955,8.92e-20,47;UBERON:0006238,8.92e-20,47;UBERON:0003528,5.34e-18,29;UBERON:0002791,5.34e-18,29;UBERON:0001893,5.34e-18,29;UBERON:0002020,9.05e-18,34;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0002346,9.83e-16,64;UBERON:0003075,9.83e-16,64;UBERON:0007284,9.83e-16,64;UBERON:0010371,1.97e-13,73;UBERON:0002038,4.25e-13,3;UBERON:0009663,4.25e-13,3;UBERON:0009661,4.25e-13,3;UBERON:0000125,4.25e-13,3;UBERON:0002308,4.25e-13,3;UBERON:0002780,7.26e-13,39;UBERON:0001890,7.26e-13,39;UBERON:0006240,7.26e-13,39;UBERON:0002420,1.39e-12,8;UBERON:0007245,1.39e-12,8;UBERON:0010009,1.39e-12,8;UBERON:0010011,1.39e-12,8;UBERON:0000454,1.39e-12,8;UBERON:0003080,1.71e-12,40;UBERON:0004733,4.73e-12,6;UBERON:0004732,4.73e-12,6;UBERON:0002028,4.73e-12,6;UBERON:0007277,4.73e-12,6;UBERON:0010314,4.85e-10,92;UBERON:0002950,6.01e-10,4;UBERON:0001891,6.01e-10,4;UBERON:0009616,6.01e-10,4;UBERON:0010286,6.01e-10,4;UBERON:0003056,7.98e-10,49;UBERON:0001896,1.03e-09,2;UBERON:0002298,1.03e-09,2;UBERON:0005290,1.03e-09,2;UBERON:0010096,1.03e-09,2;UBERON:0003076,7.37e-09,12;UBERON:0003057,7.37e-09,12;UBERON:0000956,1.31e-08,21;UBERON:0001869,1.31e-08,21;UBERON:0000203,1.31e-08,21;UBERON:0002619,5.03e-08,17;UBERON:0000025,1.62e-07,114;UBERON:0011216,6.78e-07,194;UBERON:0004111,7.99e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,1.21505344498522,0.841299845405528,0.856952953211411,1.10434270475807,0.489963196859816,1.0543001812006,0,1.10115880999389,1.0214987046815,0.921639199537461,1.31886287730194,1.00636407962651,0.52091337055676,3.07101298901519,1.12552522006336,1.22238598221448,0.589257170947335,0.427115042397309,0.745597783301202,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.19786231632332,16.7557365450764,0,0,0,0,0.748953197024114,0,0.251308704225729,0.521472960576829,0.767146371990992,0,0.973447578406546,0,0,0,0,0,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.164549020602121,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0.920650473014354,1.14579102687879,1.71853182343688,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,1.21505344498522,0.841299845405528,0.856952953211411,1.10434270475807,0.489963196859816,1.0543001812006,0,1.10115880999389,1.0214987046815,0.921639199537461,1.31886287730194,1.00636407962651,0.52091337055676,3.07101298901519,1.12552522006336,1.22238598221448,0.589257170947335,0.427115042397309,0.745597783301202,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.19786231632332,16.7557365450764,0,0,0,0,0.748953197024114,0,0.251308704225729,0.521472960576829,0.767146371990992,0,0.973447578406546,0,0,0,0,0,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.164549020602121,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0.920650473014354,1.14579102687879,1.71853182343688,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0 | ||
|short_description=p13@Spnb3 | |short_description=p13@Spnb3 | ||
}} | }} |
Latest revision as of 21:44, 25 September 2015
Short description: | p13@Spnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Spnb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 204bp_to_NM_021287, uc008gan.1_5end |
EntrezGene: | Spnb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.72e-27 | 23 |
neuroblast (sensu Vertebrata) | 3.72e-27 | 23 |
neuron | 2.88e-18 | 33 |
neuronal stem cell | 2.88e-18 | 33 |
neuroblast | 2.88e-18 | 33 |
electrically signaling cell | 2.88e-18 | 33 |
electrically responsive cell | 4.07e-15 | 39 |
electrically active cell | 4.07e-15 | 39 |
neural cell | 1.67e-13 | 43 |
ectodermal cell | 3.80e-13 | 44 |
neurectodermal cell | 3.80e-13 | 44 |
neuron of the substantia nigra | 4.25e-13 | 3 |
granule cell | 5.62e-13 | 3 |
embryonic cell | 1.97e-07 | 70 |