Personal tools

FFCP PHASE1:Mm9::chr5:29704859..29704875,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr5:29704859..29704875,- |short_description=p2@Lmbr1 |description=CAGE_peak_2_at_Lmbr1_5end |association_with_transcript=54bp_to_ENSMUST00000055195,NM_020295,u...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:29704859..29704875,-
|DHSsupport=NA
|short_description=p2@Lmbr1
|DPIdataset=NA
|description=CAGE_peak_2_at_Lmbr1_5end
|association_with_transcript=54bp_to_ENSMUST00000055195,NM_020295,uc008wug.1,uc008wuh.1,uc008wui.1,uc012dtv.1_5end
|EntrezGene=56873
|EntrezGene=56873
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9JIT0
|UniProt=Q9JIT0
|association_with_transcript=54bp_to_ENSMUST00000055195,NM_020295,uc008wug.1,uc008wuh.1,uc008wui.1,uc012dtv.1_5end
|cluster_id=chr5:29704859..29704875,-
|description=CAGE_peak_2_at_Lmbr1_5end
|id=chr5:29704859..29704875,-
|ontology_enrichment_celltype=CL:0002076!3.79e-07!15
|ontology_enrichment_celltype_v019_2=CL:0002076,1.50e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.91e-07,31
|phase1_expression=1.92178616525753,3.48975407639361,4.09499315450582,3.62957053568196,8.01433167914156,2.68606835059024,3.73780224952841,0.258246646883153,0.281577444303333,0.468129052643987,0.171217968225505,0.239316476986009,0.342401459862411,0.262261207256992,0.999329285446988,0.404950534779652,0,0.157731082679119,0,0,0.935476191661768,0,0,1.91990907352088,1.60586496747019,0.57423196411502,3.01533397311352,1.72376986148711,1.33016393619462,1.00812051903972,2.43903561720835,1.27006134691926,2.46025915033828,15.8481681015439,2.59966457776147,1.99481574430191,4.08338712524738,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.485510353031154,4.02869817521847,4.35920804243913,4.58866880404204,0,0.436050312760893,1.09843091367236,1.36100929351998,0.699932108126813,0,0.335565212115473,0.725362142011344,0,4.63066984864705,4.58453503902011,3.09403255366465,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0.518448061542388,0.675029691658453,1.68259969081106,3.14216082844184,0.883474163806454,0.489963196859816,0.287536413054709,0,1.10115880999389,1.78762273319263,2.15049146558741,0.659431438650969,1.28082701043374,2.08365348222704,1.67509799400829,1.68828783009504,1.68078072554491,2.94628585473668,2.27794689278565,2.98239113320481,0,0.755715601067855,2.31891590961342,0,0.679971333707751,1.61910957491345,1.94932925234301,0.896053774194671,1.96622188184453,0.511290967734173,1.03914401841148,1.41335829804136,0.985903938436763,2.56652954828636,2.54805239706646,7.11066703153331,1.5154372870785,1.77351905832569,3.0331466700887,0.91347103775248,1.29468941823586,3.26572705942614,0.520455980298408,0.608930956624282,1.61430848079241,1.05505848386836,2.3517741427141,0.753999547978053,10.8765785803125,1.59059292611903,0.884610551949874,1.94120219936891,2.20841518460394,2.90925151881133,9.31958806090611,2.04946557908083,1.46612694769419,1.53274233125155,0,0,0.254140454146129,1.3481157546434,0.457500602818626,1.38219787324151,1.39059456153821,2.04572365864264,2.28566849015516,1.94689515681309,2.24046600470696,1.36847667671102,1.76905930903572,14.5204880561667,0.260240885925407,0,0.720248519221397,0.150704817835715,1.42876648217788,1.2811372028485,1.59292931751539,2.06962696591213,1.29340795759705,0.567318240503458,0.175951124163949,0.43839146485515,1.39023624612799,1.39300866608867,3.49829631893504,1.19420560091096,0,0,0,1.86413195281952,0.469052119962192,0.900310307305074,0.946978942340841,0.983821158737019,2.1597395804233,0.930135779001631,1.07309360559848,1.98501082024188,1.31647879930784,3.77585167381919,3.72916523910936,3.07019973593198,2.85415149878366,2.81833479396781,1.05144974282064,1.64647379806855,2.64335026387038,1.05780226665418,0.853153002140936,0.928946687441754,1.9330119198314,2.42020229548011,2.2237804384487,1.71203063501303,1.42358718463353,2.14108641141214,1.50801125280162,2.58643413653496,2.33956904542944,2.69645822596266,2.59365659849633,3.18626037206988,0.189667900953082,0.913988100877831,1.1270773567308,2.44381593414377,1.16371492300575,1.05203729835478,1.26473074248515,1.91893192373483,0.941992367048249,2.46794327843601,1.48226313543574,0.333690211432188,0.589676985339609,0.674586337154561,0.405720242777006,0.482354319504834,0.25462585178142,1.15078454980324,0.648540907100142,1.37280706594041,2.87536413054709,0.744281895337007,0.624075346229121,0.505157755894224,1.07638448113147,1.92977408545347,2.40179147216586,0.757965647081939,0.325929952884052,0.339490171550376,2.11221223459652,2.51259386162724,1.90434912708811,6.43941037930736,1.26108115284953,2.21464689648775,2.39182152986231,1.47476983244164,1.38147985492716,2.4590339958857,3.01582567878545,0,6.88469982226651,5.79467167239938,2.24770825982909,2.22702204525186,1.47541450839008,5.80683132570058,1.26203287766503,0.780877488593277,1.07711698866399,0.238968797952552,0.222798674082394,1.13230612315533,0.809621403349789,0.584511715822624,0,0.963963949265421,0.709700426041343,1.06839362200353,1.62886959353576,1.97964147567043,1.32745138339963,0.485561272309963,0.906970670894253,0.943025398779491,0.295301892880773,0.922305443831782,3.87642439752332,2.90826983582004,1.42598951353889,1.58018378967908,1.05418608574999,1.03135543248187,2.38307724027652,0.720244376125241,0.517434735131018,0.643011105094777,0.886701168211368,1.24858172321449,0.658196082408484,0.913394847343798,0.938686832254841,4.02480934641258,1.32317038832977,3.62749756471256,5.32832608096488,3.92034012033013,2.86493625607528,2.29797259643086,1.1659233465194,0.927126510052548,1.02522528478712,1.857481811669,1.66675074632741,0.941842285023455,0.683471138605126,0.457556346413045,0.169978429993855,0,0.276399947608848,0.954670618015114,0.790839983952838,1.42323626988794,1.29606408986162,1.88179466413022,2.83871332870031,2.96701562046606,3.2234847732881,0.523511883968059,2.46268449254406,2.4853572523477,1.12738587736838,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.675824501963113,0.938857909166032,1.0416350787516,1.99232754408851,2.41584120826006,1.44015003128933,0,0.810900861160657,0.718976700153791,0.649604114888975,1.07416017400489,0.198681354781265,0.721172697119813,0.443068581523732,0.403865799792591,0.762068066549998,1.00826185136841,0.487289403698762,0.577271049841977,0.233753804363138,1.13365191807606,0.443971906748129,0.358855426437903,0.839423081820392,7.72758376128762,1.31377732815827,1.09890974560359,1.07184189539533,0.501572104035363,1.12950368523413,2.76195141904306,4.58316410751517,2.92150409984269,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,1.55328093525546,0.31136204275253,0,0.341467211508268,1.70174701947806,1.25767897576789,0.919217542250071,2.44471400581777,2.47242068686673,0.962757628775446,0.758091635291392,1.77435509923168,2.07488975524684,1.77918864192777,2.4969809437899,2.87177344778066,1.42888107384922,1.39061191133827,1.35036454324594,3.29668720642645,2.64958056241915,2.40008476669791,2.12970967391205,1.43061713968393,1.30811774969096,2.07040636913727,1.4384483341585,2.0122077016005,1.57841826862706,1.90125759384206,2.24456908663095,2.37270036248348,2.1670986122624,1.63692417267876,2.32405261778949,1.15743966588685,0.999242311751784,1.63752125911786,3.43793686477277,2.67803664896381,1.98532277207564,2.08681052058379
|phase1_expression=1.92178616525753,3.48975407639361,4.09499315450582,3.62957053568196,8.01433167914156,2.68606835059024,3.73780224952841,0.258246646883153,0.281577444303333,0.468129052643987,0.171217968225505,0.239316476986009,0.342401459862411,0.262261207256992,0.999329285446988,0.404950534779652,0,0.157731082679119,0,0,0.935476191661768,0,0,1.91990907352088,1.60586496747019,0.57423196411502,3.01533397311352,1.72376986148711,1.33016393619462,1.00812051903972,2.43903561720835,1.27006134691926,2.46025915033828,15.8481681015439,2.59966457776147,1.99481574430191,4.08338712524738,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.485510353031154,4.02869817521847,4.35920804243913,4.58866880404204,0,0.436050312760893,1.09843091367236,1.36100929351998,0.699932108126813,0,0.335565212115473,0.725362142011344,0,4.63066984864705,4.58453503902011,3.09403255366465,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0.518448061542388,0.675029691658453,1.68259969081106,3.14216082844184,0.883474163806454,0.489963196859816,0.287536413054709,0,1.10115880999389,1.78762273319263,2.15049146558741,0.659431438650969,1.28082701043374,2.08365348222704,1.67509799400829,1.68828783009504,1.68078072554491,2.94628585473668,2.27794689278565,2.98239113320481,0,0.755715601067855,2.31891590961342,0,0.679971333707751,1.61910957491345,1.94932925234301,0.896053774194671,1.96622188184453,0.511290967734173,1.03914401841148,1.41335829804136,0.985903938436763,2.56652954828636,2.54805239706646,7.11066703153331,1.5154372870785,1.77351905832569,3.0331466700887,0.91347103775248,1.29468941823586,3.26572705942614,0.520455980298408,0.608930956624282,1.61430848079241,1.05505848386836,2.3517741427141,0.753999547978053,10.8765785803125,1.59059292611903,0.884610551949874,1.94120219936891,2.20841518460394,2.90925151881133,9.31958806090611,2.04946557908083,1.46612694769419,1.53274233125155,0,0,0.254140454146129,1.3481157546434,0.457500602818626,1.38219787324151,1.39059456153821,2.04572365864264,2.28566849015516,1.94689515681309,2.24046600470696,1.36847667671102,1.76905930903572,14.5204880561667,0.260240885925407,0,0.720248519221397,0.150704817835715,1.42876648217788,1.2811372028485,1.59292931751539,2.06962696591213,1.29340795759705,0.567318240503458,0.175951124163949,0.43839146485515,1.39023624612799,1.39300866608867,3.49829631893504,1.19420560091096,0,0,0,1.86413195281952,0.469052119962192,0.900310307305074,0.946978942340841,0.983821158737019,2.1597395804233,0.930135779001631,1.07309360559848,1.98501082024188,1.31647879930784,3.77585167381919,3.72916523910936,3.07019973593198,2.85415149878366,2.81833479396781,1.05144974282064,1.64647379806855,2.64335026387038,1.05780226665418,0.853153002140936,0.928946687441754,1.9330119198314,2.42020229548011,2.2237804384487,1.71203063501303,1.42358718463353,2.14108641141214,1.50801125280162,2.58643413653496,2.33956904542944,2.69645822596266,2.59365659849633,3.18626037206988,0.189667900953082,0.913988100877831,1.1270773567308,2.44381593414377,1.16371492300575,1.05203729835478,1.26473074248515,1.91893192373483,0.941992367048249,2.46794327843601,1.48226313543574,0.333690211432188,0.589676985339609,0.674586337154561,0.405720242777006,0.482354319504834,0.25462585178142,1.15078454980324,0.648540907100142,1.37280706594041,2.87536413054709,0.744281895337007,0.624075346229121,0.505157755894224,1.07638448113147,1.92977408545347,2.40179147216586,0.757965647081939,0.325929952884052,0.339490171550376,2.11221223459652,2.51259386162724,1.90434912708811,6.43941037930736,1.26108115284953,2.21464689648775,2.39182152986231,1.47476983244164,1.38147985492716,2.4590339958857,3.01582567878545,0,6.88469982226651,5.79467167239938,2.24770825982909,2.22702204525186,1.47541450839008,5.80683132570058,1.26203287766503,0.780877488593277,1.07711698866399,0.238968797952552,0.222798674082394,1.13230612315533,0.809621403349789,0.584511715822624,0,0.963963949265421,0.709700426041343,1.06839362200353,1.62886959353576,1.97964147567043,1.32745138339963,0.485561272309963,0.906970670894253,0.943025398779491,0.295301892880773,0.922305443831782,3.87642439752332,2.90826983582004,1.42598951353889,1.58018378967908,1.05418608574999,1.03135543248187,2.38307724027652,0.720244376125241,0.517434735131018,0.643011105094777,0.886701168211368,1.24858172321449,0.658196082408484,0.913394847343798,0.938686832254841,4.02480934641258,1.32317038832977,3.62749756471256,5.32832608096488,3.92034012033013,2.86493625607528,2.29797259643086,1.1659233465194,0.927126510052548,1.02522528478712,1.857481811669,1.66675074632741,0.941842285023455,0.683471138605126,0.457556346413045,0.169978429993855,0,0.276399947608848,0.954670618015114,0.790839983952838,1.42323626988794,1.29606408986162,1.88179466413022,2.83871332870031,2.96701562046606,3.2234847732881,0.523511883968059,2.46268449254406,2.4853572523477,1.12738587736838,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.675824501963113,0.938857909166032,1.0416350787516,1.99232754408851,2.41584120826006,1.44015003128933,0,0.810900861160657,0.718976700153791,0.649604114888975,1.07416017400489,0.198681354781265,0.721172697119813,0.443068581523732,0.403865799792591,0.762068066549998,1.00826185136841,0.487289403698762,0.577271049841977,0.233753804363138,1.13365191807606,0.443971906748129,0.358855426437903,0.839423081820392,7.72758376128762,1.31377732815827,1.09890974560359,1.07184189539533,0.501572104035363,1.12950368523413,2.76195141904306,4.58316410751517,2.92150409984269,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,1.55328093525546,0.31136204275253,0,0.341467211508268,1.70174701947806,1.25767897576789,0.919217542250071,2.44471400581777,2.47242068686673,0.962757628775446,0.758091635291392,1.77435509923168,2.07488975524684,1.77918864192777,2.4969809437899,2.87177344778066,1.42888107384922,1.39061191133827,1.35036454324594,3.29668720642645,2.64958056241915,2.40008476669791,2.12970967391205,1.43061713968393,1.30811774969096,2.07040636913727,1.4384483341585,2.0122077016005,1.57841826862706,1.90125759384206,2.24456908663095,2.37270036248348,2.1670986122624,1.63692417267876,2.32405261778949,1.15743966588685,0.999242311751784,1.63752125911786,3.43793686477277,2.67803664896381,1.98532277207564,2.08681052058379
|short_description=p2@Lmbr1
}}
}}

Latest revision as of 21:32, 25 September 2015

Short description:p2@Lmbr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lmbr1_5end
Coexpression cluster:NA
Association with transcript: 54bp_to_ENSMUST00000055195, NM_020295, uc008wug.1, uc008wuh.1, uc008wui.1, uc012dtv.1_5end
EntrezGene:Lmbr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lmbr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.36
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A810.88
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G414.52
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G13.73
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H33.92
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B82.97
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
endo-epithelial cell1.50e-0715

Uber anatomy
Ontology termp-valuen
intestine6.91e-0731
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:29704859..29704875,-&oldid=4215273"