FFCP PHASE1:Mm9::chr16:92826180..92826191,-: Difference between revisions
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{{FFCP|EntrezGene=12394|HGNC=|MCL_coexpression_id=522|UniProt=E9Q3L8|association_with_transcript=64bp_to_ENSMUST00000113957_5end|description=CAGE_peak_5_at_Runx1_5end|id=chr16:92826180..92826191,-|ontology_enrichment_celltype=CL:0000988!8.44e-12!32;CL:0002032!8.44e-12!32;CL:0000037!8.44e-12!32;CL:0000566!8.44e-12!32;CL:0000837!8.44e-12!32;CL:0002320!8.80e-10!46;CL:0000134!8.80e-10!46;CL:0000738!1.58e-08!17;CL:0002087!1.58e-08!17;CL:0002031!4.40e-08!25;CL:0000219!3.26e-07!54;CL:0000838!5.86e-07!12;CL:0000049!6.11e-07!19|ontology_enrichment_celltype_v019_2=CL:0002320,3.86e-11,46;CL:0000134,3.86e-11,46;CL:0000988,1.31e-09,32;CL:0002032,1.31e-09,32;CL:0000037,1.31e-09,32;CL:0000837,1.31e-09,32;CL:0000219,5.70e-09,54;CL:0000034,1.55e-08,97;CL:0002092,2.28e-08,3;CL:0002540,2.28e-08,3;CL:0000049,4.97e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.05e-08,3;DOID:4045,1.05e-08,3|ontology_enrichment_uberon=UBERON:0002390!2.07e-19!45;UBERON:0003061!2.07e-19!45;UBERON:0002193!1.21e-18!48;UBERON:0002405!1.83e-13!70;UBERON:0003081!7.30e-12!88;UBERON:0004177!3.09e-11!29;UBERON:0002384!8.80e-10!46;UBERON:0001474!2.64e-09!22;UBERON:0004765!2.64e-09!22;UBERON:0001434!2.64e-09!22;UBERON:0002204!4.44e-09!32;UBERON:0002371!4.81e-09!16;UBERON:0002370!5.34e-09!23;UBERON:0000974!5.34e-09!23;UBERON:0004807!5.34e-09!23;UBERON:0005058!5.34e-09!23;UBERON:0003351!5.34e-09!23;UBERON:0009113!5.34e-09!23;UBERON:0003295!5.34e-09!23;UBERON:0009722!5.34e-09!23;UBERON:0005562!5.34e-09!23;UBERON:0007690!5.34e-09!23;UBERON:0006562!2.48e-08!24;UBERON:0003408!2.48e-08!24;UBERON:0001557!2.48e-08!24;UBERON:0001042!2.48e-08!24;UBERON:0008814!2.48e-08!24;UBERON:0009145!2.48e-08!24;UBERON:0005057!6.21e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.86e-11,46;UBERON:0002193,6.07e-10,48;UBERON:0002405,6.07e-10,48;UBERON:0002204,1.48e-09,32;UBERON:0002371,2.22e-09,16;UBERON:0002390,2.30e-09,45;UBERON:0003061,2.30e-09,45;UBERON:0001474,3.05e-08,22;UBERON:0004765,3.05e-08,22;UBERON:0001434,3.05e-08,22|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.903863264091034,1.12630977721333,0.70219357896598,0.171217968225505,0,0.684802919724823,0.437102012094987,0,0,0.699561878128147,0.788655413395594,0.685572168028694,1.69755860719212,0,2.18440092641948,2.61199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,3.1253413780952,1.0470474879476,6.47054636834116,2.73218193983378,2.42755176515577,0,0,0,0,0,0,0,0.139986421625363,0,1.51004345451963,0.725362142011344,0.672187598284928,0,0,0.515672092277442,0,0,0,0,0,1.7997994345628,2.96659908770092,1.4209602298922,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,1.02258193546835,0,0.35333957451034,0,2.56652954828636,0,0,0,0,0,0,1.55362730188303,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0.144599356919912,2.65383165584962,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,7.6681679683789,2.39961092397363,3.81210681219194,0,0,0,0,0,0,0.162241263067758,0,0.746441823660558,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,2.1066395619397,1.80143534980301,3.12579849335152,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.667380422864376,0.393117990226406,0.224862112384854,0.202860121388503,1.20588579876208,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.81931657357869,0,0.144649058581512,3.01582567878545,0.54390568381871,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,1.02522528478712,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0.457556346413045,3.90950388985867,6.71766971153558,3.31679937130617,0,0,0,0,0,0,0.269728692769641,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,1.21635129174099,1.02710957164827,0.909445760844565,1.07416017400489,1.19208812868759,0.600977247599844,0.295379054349154,0.605798699688886,0.381034033274999,0.302478555410522,0.194915761479505,0.192423683280659,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p5@Runx1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12394 | |||
|HGNC= | |||
|MCL_coexpression_id=522 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q3L8 | |||
|association_with_transcript=64bp_to_ENSMUST00000113957_5end | |||
|cluster_id=chr16:92826180..92826191,- | |||
|description=CAGE_peak_5_at_Runx1_5end | |||
|id=chr16:92826180..92826191,- | |||
|ontology_enrichment_celltype=CL:0000988!8.44e-12!32;CL:0002032!8.44e-12!32;CL:0000037!8.44e-12!32;CL:0000566!8.44e-12!32;CL:0000837!8.44e-12!32;CL:0002320!8.80e-10!46;CL:0000134!8.80e-10!46;CL:0000738!1.58e-08!17;CL:0002087!1.58e-08!17;CL:0002031!4.40e-08!25;CL:0000219!3.26e-07!54;CL:0000838!5.86e-07!12;CL:0000049!6.11e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,3.86e-11,46;CL:0000134,3.86e-11,46;CL:0000988,1.31e-09,32;CL:0002032,1.31e-09,32;CL:0000037,1.31e-09,32;CL:0000837,1.31e-09,32;CL:0000219,5.70e-09,54;CL:0000034,1.55e-08,97;CL:0002092,2.28e-08,3;CL:0002540,2.28e-08,3;CL:0000049,4.97e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.05e-08,3;DOID:4045,1.05e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.07e-19!45;UBERON:0003061!2.07e-19!45;UBERON:0002193!1.21e-18!48;UBERON:0002405!1.83e-13!70;UBERON:0003081!7.30e-12!88;UBERON:0004177!3.09e-11!29;UBERON:0002384!8.80e-10!46;UBERON:0001474!2.64e-09!22;UBERON:0004765!2.64e-09!22;UBERON:0001434!2.64e-09!22;UBERON:0002204!4.44e-09!32;UBERON:0002371!4.81e-09!16;UBERON:0002370!5.34e-09!23;UBERON:0000974!5.34e-09!23;UBERON:0004807!5.34e-09!23;UBERON:0005058!5.34e-09!23;UBERON:0003351!5.34e-09!23;UBERON:0009113!5.34e-09!23;UBERON:0003295!5.34e-09!23;UBERON:0009722!5.34e-09!23;UBERON:0005562!5.34e-09!23;UBERON:0007690!5.34e-09!23;UBERON:0006562!2.48e-08!24;UBERON:0003408!2.48e-08!24;UBERON:0001557!2.48e-08!24;UBERON:0001042!2.48e-08!24;UBERON:0008814!2.48e-08!24;UBERON:0009145!2.48e-08!24;UBERON:0005057!6.21e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.86e-11,46;UBERON:0002193,6.07e-10,48;UBERON:0002405,6.07e-10,48;UBERON:0002204,1.48e-09,32;UBERON:0002371,2.22e-09,16;UBERON:0002390,2.30e-09,45;UBERON:0003061,2.30e-09,45;UBERON:0001474,3.05e-08,22;UBERON:0004765,3.05e-08,22;UBERON:0001434,3.05e-08,22 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.903863264091034,1.12630977721333,0.70219357896598,0.171217968225505,0,0.684802919724823,0.437102012094987,0,0,0.699561878128147,0.788655413395594,0.685572168028694,1.69755860719212,0,2.18440092641948,2.61199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,3.1253413780952,1.0470474879476,6.47054636834116,2.73218193983378,2.42755176515577,0,0,0,0,0,0,0,0.139986421625363,0,1.51004345451963,0.725362142011344,0.672187598284928,0,0,0.515672092277442,0,0,0,0,0,1.7997994345628,2.96659908770092,1.4209602298922,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,1.02258193546835,0,0.35333957451034,0,2.56652954828636,0,0,0,0,0,0,1.55362730188303,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0.144599356919912,2.65383165584962,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,7.6681679683789,2.39961092397363,3.81210681219194,0,0,0,0,0,0,0.162241263067758,0,0.746441823660558,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,2.1066395619397,1.80143534980301,3.12579849335152,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.667380422864376,0.393117990226406,0.224862112384854,0.202860121388503,1.20588579876208,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.81931657357869,0,0.144649058581512,3.01582567878545,0.54390568381871,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,1.02522528478712,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0.457556346413045,3.90950388985867,6.71766971153558,3.31679937130617,0,0,0,0,0,0,0.269728692769641,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,1.21635129174099,1.02710957164827,0.909445760844565,1.07416017400489,1.19208812868759,0.600977247599844,0.295379054349154,0.605798699688886,0.381034033274999,0.302478555410522,0.194915761479505,0.192423683280659,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p5@Runx1 | |||
}} |
Latest revision as of 21:09, 25 September 2015
Short description: | p5@Runx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Runx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:522 |
Association with transcript: | 64bp_to_ENSMUST00000113957_5end |
EntrezGene: | Runx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 3.86e-11 | 46 |
mesenchymal cell | 3.86e-11 | 46 |
hematopoietic cell | 1.31e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.31e-09 | 32 |
hematopoietic stem cell | 1.31e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.31e-09 | 32 |
motile cell | 5.70e-09 | 54 |
stem cell | 1.55e-08 | 97 |
bone marrow cell | 2.28e-08 | 3 |
mesenchymal stem cell of the bone marrow | 2.28e-08 | 3 |
common myeloid progenitor | 4.97e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.86e-11 | 46 |
hemolymphoid system | 6.07e-10 | 48 |
immune system | 6.07e-10 | 48 |
musculoskeletal system | 1.48e-09 | 32 |
bone marrow | 2.22e-09 | 16 |
hematopoietic system | 2.30e-09 | 45 |
blood island | 2.30e-09 | 45 |
bone element | 3.05e-08 | 22 |
skeletal element | 3.05e-08 | 22 |
skeletal system | 3.05e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.05e-08 | 3 |
muscle cancer | 1.05e-08 | 3 |