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FFCP PHASE1:Mm9::chr8:86424519..86424544,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=330814
|EntrezGene=330814
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=D6RI60
|UniProt=D6RI60
|association_with_transcript=47bp_to_ENSMUST00000124355_5end
|association_with_transcript=47bp_to_ENSMUST00000124355_5end
|cluster_id=chr8:86424519..86424544,+
|description=CAGE_peak_5_at_Lphn1_5end
|description=CAGE_peak_5_at_Lphn1_5end
|id=chr8:86424519..86424544,+
|id=chr8:86424519..86424544,+
|ontology_enrichment_celltype=CL:0000540!1.51e-14!33;CL:0000047!1.51e-14!33;CL:0000031!1.51e-14!33;CL:0000404!1.51e-14!33;CL:0000117!1.58e-14!23;CL:0000337!1.58e-14!23;CL:0000221!6.37e-13!44;CL:0000133!6.37e-13!44;CL:0002319!7.07e-13!43;CL:0000393!7.64e-10!39;CL:0000211!7.64e-10!39;CL:0000055!1.19e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.98e-23,23;CL:0000337,5.98e-23,23;CL:0000540,1.30e-17,33;CL:0000047,1.30e-17,33;CL:0000031,1.30e-17,33;CL:0000404,1.30e-17,33;CL:0002319,2.22e-16,43;CL:0000221,7.77e-16,44;CL:0000133,7.77e-16,44;CL:0000393,6.95e-14,39;CL:0000211,6.95e-14,39;CL:0002321,2.41e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.11e-21!73;UBERON:0005743!1.11e-21!73;UBERON:0000073!2.20e-21!75;UBERON:0001016!2.20e-21!75;UBERON:0004121!7.53e-17!102;UBERON:0000924!7.53e-17!102;UBERON:0006601!7.53e-17!102;UBERON:0001049!7.58e-16!52;UBERON:0005068!7.58e-16!52;UBERON:0006241!7.58e-16!52;UBERON:0007135!7.58e-16!52;UBERON:0002020!1.51e-15!34;UBERON:0002346!3.35e-15!71;UBERON:0003075!3.35e-15!71;UBERON:0007284!3.35e-15!71;UBERON:0000955!4.90e-15!50;UBERON:0006238!4.90e-15!50;UBERON:0002616!1.49e-14!49;UBERON:0003080!3.46e-13!40;UBERON:0002780!4.80e-13!39;UBERON:0001890!4.80e-13!39;UBERON:0006240!4.80e-13!39;UBERON:0000033!5.38e-13!63;UBERON:0003056!2.65e-12!49;UBERON:0002791!4.48e-12!29;UBERON:0003528!4.48e-12!29;UBERON:0001893!4.48e-12!29;UBERON:0000153!1.38e-08!94;UBERON:0000956!3.19e-08!21;UBERON:0001869!3.19e-08!21;UBERON:0000203!3.19e-08!21;UBERON:0007811!3.56e-08!86;UBERON:0000991!3.49e-07!18;UBERON:0005564!3.49e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-26,73;UBERON:0001016,2.75e-25,75;UBERON:0000073,9.51e-24,54;UBERON:0002020,2.25e-22,34;UBERON:0001049,1.04e-19,52;UBERON:0005068,1.04e-19,52;UBERON:0006241,1.04e-19,52;UBERON:0007135,1.04e-19,52;UBERON:0004121,1.84e-18,95;UBERON:0000924,1.84e-18,95;UBERON:0006601,1.84e-18,95;UBERON:0002780,1.17e-16,39;UBERON:0001890,1.17e-16,39;UBERON:0006240,1.17e-16,39;UBERON:0003080,4.61e-16,40;UBERON:0003528,8.28e-16,29;UBERON:0002791,8.28e-16,29;UBERON:0001893,8.28e-16,29;UBERON:0002346,2.19e-15,64;UBERON:0003075,2.19e-15,64;UBERON:0007284,2.19e-15,64;UBERON:0000955,2.31e-15,47;UBERON:0006238,2.31e-15,47;UBERON:0002616,1.53e-14,46;UBERON:0003056,6.88e-13,49;UBERON:0010371,2.21e-12,73;UBERON:0000956,5.71e-11,21;UBERON:0001869,5.71e-11,21;UBERON:0000203,5.71e-11,21;UBERON:0000991,2.50e-10,18;UBERON:0005564,2.50e-10,18;UBERON:0000473,6.84e-10,14;UBERON:0004176,2.11e-09,17;UBERON:0009196,2.11e-09,17;UBERON:0009117,2.11e-09,17;UBERON:0003135,4.64e-09,15;UBERON:0001948,8.41e-09,5;UBERON:0002315,8.41e-09,5;UBERON:0010314,9.40e-09,92;UBERON:0003101,2.46e-08,16;UBERON:0000079,2.46e-08,16;UBERON:0002240,3.31e-07,6;UBERON:0005174,3.31e-07,6;UBERON:0001137,3.31e-07,6;UBERON:0002619,3.57e-07,17;UBERON:0003133,5.79e-07,24
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,1.82084814773638,2.64495489636016,3.80298842103708,0.338844532069132,0,0,0,0,2.09720077362883,1.53687322128622,3.94020526772215,2.16009501330705,1.05162480675691,4.57041575046086,3.3130281142742,0.857435594504678,0.958454710182364,4.5960939330501,3.30347642998166,2.42605942361857,1.84327839907492,2.1101806036831,0.731901148819277,4.16730696445408,1.3959149950069,1.12552522006336,1.22238598221448,3.83017161115768,3.41692033917847,2.42319279572891,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0,0.693941307064543,0.608930956624282,0.461230994512117,0.301445281105245,1.17588707135705,0.251333182659351,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,7.16229807043327,1.39059456153821,2.04572365864264,0,1.62241263067758,1.01839363850316,0.248813941220186,0,0,0.130120442962704,0,0.180062129805349,0.452114453507145,0.748401490664606,0.896796041993948,1.12442069471675,0.258703370739016,0.215567992932842,0.945530400839096,1.23165786914764,0.876782929710299,0,0,0.61734640922383,1.39323986772945,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.473489471170421,0.590292695242212,0.308534225774757,0,0,0,0.493679549740441,0,0.0810688095458557,0,0,0,1.89260953707715,3.91037527041281,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0,0.758671603812327,0.799739588268102,0,0.203651327845314,0,0.350679099451593,0.189709611372772,0,0,0,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.651859905768103,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0.315270288212382,0,0.478364305972461,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0.390438744296638,0.861693590931196,0.477937595905104,0.668396022247182,0.283076530788832,0.809621403349789,2.63030272120181,1.58115111178609,1.28528526568723,0.283880170416537,0.534196811001766,2.11753047159649,0.164970122972535,0,0.485561272309963,0.906970670894253,0,0.295301892880773,0.614870295887855,0,0,0,0.316036757935816,0,0,0,1.08036656418786,1.16422815404479,1.07168517515796,0.886701168211368,0.356737635204141,0.658196082408484,1.2178597964584,0,0,0,0,0,0.361877549568935,0,0.164140899745061,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.790839983952838,0.609958401380546,0.540026704109006,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,1.12738587736838,2.24274819065968,1.32366792365678,1.75006069509643,0.904118764344118,1.85851738039856,2.8165737274981,2.99470085141085,1.67774951081137,1.20792060413003,1.72818003754719,0.632022241256357,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0,0.403304740547362,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0.665957860122194,0.538283139656854,0.167884616364078,0,0.187682475451182,0.36630324853453,0,0,2.82375921308533,1.84130094602871,1.71868654031819,5.15559547031063,0.685082519770642,0.755393897389701,1.35004500046361,1.35096360967266,0,1.55328093525546,0.207574695168353,1.19707462020309,1.19513524027894,0.243106717068294,1.25767897576789,0.919217542250071,0.44449345560323,0.618105171716683,0.962757628775446,0.252697211763798,0,0.377252682772152,0.936415074698824,0.832326981263301,1.14870937911227,2.38146845641537,0.579421629724277,0.578727661391115,0,1.32479028120958,0,0.70990322463735,0.476872379894642,0.145346416632329,0.658765662907314,0.25384382367503,0,0.789209134313529,0.679020569229309,0.561142271657738,1.06771516311757,0.591026894253381,0,0.929621047115796,0.964533054905707,0.999242311751784,0.701794825336225,0,0.191288332068843,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,1.82084814773638,2.64495489636016,3.80298842103708,0.338844532069132,0,0,0,0,2.09720077362883,1.53687322128622,3.94020526772215,2.16009501330705,1.05162480675691,4.57041575046086,3.3130281142742,0.857435594504678,0.958454710182364,4.5960939330501,3.30347642998166,2.42605942361857,1.84327839907492,2.1101806036831,0.731901148819277,4.16730696445408,1.3959149950069,1.12552522006336,1.22238598221448,3.83017161115768,3.41692033917847,2.42319279572891,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0,0.693941307064543,0.608930956624282,0.461230994512117,0.301445281105245,1.17588707135705,0.251333182659351,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,7.16229807043327,1.39059456153821,2.04572365864264,0,1.62241263067758,1.01839363850316,0.248813941220186,0,0,0.130120442962704,0,0.180062129805349,0.452114453507145,0.748401490664606,0.896796041993948,1.12442069471675,0.258703370739016,0.215567992932842,0.945530400839096,1.23165786914764,0.876782929710299,0,0,0.61734640922383,1.39323986772945,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.473489471170421,0.590292695242212,0.308534225774757,0,0,0,0.493679549740441,0,0.0810688095458557,0,0,0,1.89260953707715,3.91037527041281,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0,0.758671603812327,0.799739588268102,0,0.203651327845314,0,0.350679099451593,0.189709611372772,0,0,0,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.651859905768103,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0.315270288212382,0,0.478364305972461,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0.390438744296638,0.861693590931196,0.477937595905104,0.668396022247182,0.283076530788832,0.809621403349789,2.63030272120181,1.58115111178609,1.28528526568723,0.283880170416537,0.534196811001766,2.11753047159649,0.164970122972535,0,0.485561272309963,0.906970670894253,0,0.295301892880773,0.614870295887855,0,0,0,0.316036757935816,0,0,0,1.08036656418786,1.16422815404479,1.07168517515796,0.886701168211368,0.356737635204141,0.658196082408484,1.2178597964584,0,0,0,0,0,0.361877549568935,0,0.164140899745061,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.790839983952838,0.609958401380546,0.540026704109006,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,1.12738587736838,2.24274819065968,1.32366792365678,1.75006069509643,0.904118764344118,1.85851738039856,2.8165737274981,2.99470085141085,1.67774951081137,1.20792060413003,1.72818003754719,0.632022241256357,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0,0.403304740547362,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0.665957860122194,0.538283139656854,0.167884616364078,0,0.187682475451182,0.36630324853453,0,0,2.82375921308533,1.84130094602871,1.71868654031819,5.15559547031063,0.685082519770642,0.755393897389701,1.35004500046361,1.35096360967266,0,1.55328093525546,0.207574695168353,1.19707462020309,1.19513524027894,0.243106717068294,1.25767897576789,0.919217542250071,0.44449345560323,0.618105171716683,0.962757628775446,0.252697211763798,0,0.377252682772152,0.936415074698824,0.832326981263301,1.14870937911227,2.38146845641537,0.579421629724277,0.578727661391115,0,1.32479028120958,0,0.70990322463735,0.476872379894642,0.145346416632329,0.658765662907314,0.25384382367503,0,0.789209134313529,0.679020569229309,0.561142271657738,1.06771516311757,0.591026894253381,0,0.929621047115796,0.964533054905707,0.999242311751784,0.701794825336225,0,0.191288332068843,0,0
|short_description=p5@Lphn1
|short_description=p5@Lphn1
}}
}}

Latest revision as of 20:54, 25 September 2015

Short description:p5@Lphn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lphn1_5end
Coexpression cluster:NA
Association with transcript: 47bp_to_ENSMUST00000124355_5end
EntrezGene:Lphn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Lphn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.98e-2323
neuroblast (sensu Vertebrata)5.98e-2323
neuron1.30e-1733
neuronal stem cell1.30e-1733
neuroblast1.30e-1733
electrically signaling cell1.30e-1733
neural cell2.22e-1643
ectodermal cell7.77e-1644
neurectodermal cell7.77e-1644
electrically responsive cell6.95e-1439
electrically active cell6.95e-1439
embryonic cell2.41e-0770

Uber anatomy
Ontology termp-valuen
central nervous system2.60e-2673
nervous system2.75e-2575
regional part of nervous system9.51e-2454
gray matter2.25e-2234
neural tube1.04e-1952
neural rod1.04e-1952
future spinal cord1.04e-1952
neural keel1.04e-1952
ectoderm-derived structure1.84e-1895
ectoderm1.84e-1895
presumptive ectoderm1.84e-1895
regional part of forebrain1.17e-1639
forebrain1.17e-1639
future forebrain1.17e-1639
anterior neural tube4.61e-1640
brain grey matter8.28e-1629
regional part of telencephalon8.28e-1629
telencephalon8.28e-1629
neurectoderm2.19e-1564
neural plate2.19e-1564
presumptive neural plate2.19e-1564
brain2.31e-1547
future brain2.31e-1547
regional part of brain1.53e-1446
pre-chordal neural plate6.88e-1349
ecto-epithelium2.21e-1273
cerebral cortex5.71e-1121
cerebral hemisphere5.71e-1121
pallium5.71e-1121
gonad2.50e-1018
gonad primordium2.50e-1018
testis6.84e-1014
external genitalia2.11e-0917
indifferent external genitalia2.11e-0917
indifferent gonad2.11e-0917
male reproductive organ4.64e-0915
regional part of spinal cord8.41e-095
gray matter of spinal cord8.41e-095
structure with developmental contribution from neural crest9.40e-0992
male organism2.46e-0816
male reproductive system2.46e-0816
spinal cord3.31e-076
dorsal region element3.31e-076
dorsum3.31e-076
regional part of cerebral cortex3.57e-0717
reproductive organ5.79e-0724
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