FFCP PHASE1:Mm9::chr19:46119839..46119850,-: Difference between revisions
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{{FFCP|EntrezGene=16825|HGNC=|MCL_coexpression_id=2265|UniProt=D3Z1C5|association_with_transcript=-135bp_to_ENSMUST00000152946_5end|description=CAGE_peak_13_at_Ldb1_5end|id=chr19:46119839..46119850,-|ontology_enrichment_celltype=CL:0000117!2.49e-08!23;CL:0000337!2.49e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-11,23;CL:0000337,6.12e-11,23;CL:0002609,1.06e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.89e-16!34;UBERON:0001049!9.88e-16!52;UBERON:0005068!9.88e-16!52;UBERON:0006241!9.88e-16!52;UBERON:0007135!9.88e-16!52;UBERON:0001017!7.15e-15!73;UBERON:0005743!7.15e-15!73;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0002346!2.41e-14!71;UBERON:0003075!2.41e-14!71;UBERON:0007284!2.41e-14!71;UBERON:0000073!4.41e-14!75;UBERON:0001016!4.41e-14!75;UBERON:0000955!1.21e-13!50;UBERON:0006238!1.21e-13!50;UBERON:0000153!4.01e-13!94;UBERON:0002616!5.42e-13!49;UBERON:0003080!6.65e-13!40;UBERON:0002780!1.49e-12!39;UBERON:0001890!1.49e-12!39;UBERON:0006240!1.49e-12!39;UBERON:0004121!2.47e-12!102;UBERON:0000924!2.47e-12!102;UBERON:0006601!2.47e-12!102;UBERON:0000033!2.50e-12!63;UBERON:0003056!4.15e-12!49;UBERON:0007811!1.84e-11!86;UBERON:0000956!2.95e-11!21;UBERON:0001869!2.95e-11!21;UBERON:0000203!2.95e-11!21;UBERON:0002619!8.24e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0003528,8.24e-27,29;UBERON:0002791,8.24e-27,29;UBERON:0001893,8.24e-27,29;UBERON:0002020,7.27e-26,34;UBERON:0000955,2.98e-22,47;UBERON:0006238,2.98e-22,47;UBERON:0002780,5.41e-22,39;UBERON:0001890,5.41e-22,39;UBERON:0006240,5.41e-22,39;UBERON:0003080,2.95e-21,40;UBERON:0000956,7.74e-21,21;UBERON:0001869,7.74e-21,21;UBERON:0000203,7.74e-21,21;UBERON:0002616,7.84e-21,46;UBERON:0001049,1.79e-20,52;UBERON:0005068,1.79e-20,52;UBERON:0006241,1.79e-20,52;UBERON:0007135,1.79e-20,52;UBERON:0000073,2.10e-19,54;UBERON:0003056,2.57e-17,49;UBERON:0001017,2.90e-17,73;UBERON:0001016,1.48e-16,75;UBERON:0002346,3.21e-16,64;UBERON:0003075,3.21e-16,64;UBERON:0007284,3.21e-16,64;UBERON:0002619,4.14e-15,17;UBERON:0010371,2.70e-14,73;UBERON:0004121,6.03e-13,95;UBERON:0000924,6.03e-13,95;UBERON:0006601,6.03e-13,95;UBERON:0002021,1.74e-10,10;UBERON:0000411,1.74e-10,10;UBERON:0001950,1.74e-10,10;UBERON:0010314,1.48e-09,92;UBERON:0000369,7.26e-09,5;UBERON:0002435,7.26e-09,5;UBERON:0000204,7.26e-09,5;UBERON:0010082,7.26e-09,5;UBERON:0002420,4.21e-07,8;UBERON:0007245,4.21e-07,8;UBERON:0010009,4.21e-07,8;UBERON:0010011,4.21e-07,8;UBERON:0000454,4.21e-07,8|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,1.36974374580404,0.478632953972018,0.342401459862411,0.262261207256992,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,1.56478268869608,0.218025156380447,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0.167782606057736,0.725362142011344,1.34437519656986,0.257259436035947,0.286533439938757,1.03134418455488,1.82084814773638,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,0,1.76272340924412,2.02508907497536,1.47227472945967,0.856952953211411,0.662605622854841,1.5923803897944,2.49198224647415,2.75765635983006,0,0.638436690425939,0.307213066512487,1.71452174049252,1.37231465403614,1.56274011167028,0.558365998002762,1.12552522006336,0.45839474333043,1.17851434189467,0.854230084794618,1.3047961207771,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0.539703191637817,0,0.448026887097336,0,0,0,0.70667914902068,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,0.494389935468748,0.722996784599558,0,0.485300549842228,0.441683036920787,0,0,0.292780797011547,1.25668024088073,0,0,0,0,0.898743836428936,1.83000241127451,5.6544458450789,1.73824320192276,0.511430914660661,1.45451631191692,1.62241263067758,0.712875546952214,0.248813941220186,0,0,0.260240885925407,0.229902104433473,0.540186389416048,0.150704817835715,0.680364991513279,1.0249097622788,0.655912071918102,0.776110112217047,0.215567992932842,1.13463648100692,1.75951124163949,0.43839146485515,0.834141747676794,1.39300866608867,0.823128545631774,0.59710280045548,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.393528463494808,0.308534225774757,0,0.536546802799238,0.350296027101508,0.329119699826961,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,1.05144974282064,2.36680608472354,0,0,0.639864751605702,0.696710015581316,0.515469845288373,1.00841762311671,0.667134131534611,0,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.350679099451593,0.505892296994058,0.295220295959204,0.470996183524124,0,0,0,0,0,0,0,0,0,0,0,0,0.37214094766850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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16825 | |||
|HGNC= | |||
|MCL_coexpression_id=2265 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z1C5 | |||
|association_with_transcript=-135bp_to_ENSMUST00000152946_5end | |||
|cluster_id=chr19:46119839..46119850,- | |||
|description=CAGE_peak_13_at_Ldb1_5end | |||
|id=chr19:46119839..46119850,- | |||
|ontology_enrichment_celltype=CL:0000117!2.49e-08!23;CL:0000337!2.49e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-11,23;CL:0000337,6.12e-11,23;CL:0002609,1.06e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.89e-16!34;UBERON:0001049!9.88e-16!52;UBERON:0005068!9.88e-16!52;UBERON:0006241!9.88e-16!52;UBERON:0007135!9.88e-16!52;UBERON:0001017!7.15e-15!73;UBERON:0005743!7.15e-15!73;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0002346!2.41e-14!71;UBERON:0003075!2.41e-14!71;UBERON:0007284!2.41e-14!71;UBERON:0000073!4.41e-14!75;UBERON:0001016!4.41e-14!75;UBERON:0000955!1.21e-13!50;UBERON:0006238!1.21e-13!50;UBERON:0000153!4.01e-13!94;UBERON:0002616!5.42e-13!49;UBERON:0003080!6.65e-13!40;UBERON:0002780!1.49e-12!39;UBERON:0001890!1.49e-12!39;UBERON:0006240!1.49e-12!39;UBERON:0004121!2.47e-12!102;UBERON:0000924!2.47e-12!102;UBERON:0006601!2.47e-12!102;UBERON:0000033!2.50e-12!63;UBERON:0003056!4.15e-12!49;UBERON:0007811!1.84e-11!86;UBERON:0000956!2.95e-11!21;UBERON:0001869!2.95e-11!21;UBERON:0000203!2.95e-11!21;UBERON:0002619!8.24e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,8.24e-27,29;UBERON:0002791,8.24e-27,29;UBERON:0001893,8.24e-27,29;UBERON:0002020,7.27e-26,34;UBERON:0000955,2.98e-22,47;UBERON:0006238,2.98e-22,47;UBERON:0002780,5.41e-22,39;UBERON:0001890,5.41e-22,39;UBERON:0006240,5.41e-22,39;UBERON:0003080,2.95e-21,40;UBERON:0000956,7.74e-21,21;UBERON:0001869,7.74e-21,21;UBERON:0000203,7.74e-21,21;UBERON:0002616,7.84e-21,46;UBERON:0001049,1.79e-20,52;UBERON:0005068,1.79e-20,52;UBERON:0006241,1.79e-20,52;UBERON:0007135,1.79e-20,52;UBERON:0000073,2.10e-19,54;UBERON:0003056,2.57e-17,49;UBERON:0001017,2.90e-17,73;UBERON:0001016,1.48e-16,75;UBERON:0002346,3.21e-16,64;UBERON:0003075,3.21e-16,64;UBERON:0007284,3.21e-16,64;UBERON:0002619,4.14e-15,17;UBERON:0010371,2.70e-14,73;UBERON:0004121,6.03e-13,95;UBERON:0000924,6.03e-13,95;UBERON:0006601,6.03e-13,95;UBERON:0002021,1.74e-10,10;UBERON:0000411,1.74e-10,10;UBERON:0001950,1.74e-10,10;UBERON:0010314,1.48e-09,92;UBERON:0000369,7.26e-09,5;UBERON:0002435,7.26e-09,5;UBERON:0000204,7.26e-09,5;UBERON:0010082,7.26e-09,5;UBERON:0002420,4.21e-07,8;UBERON:0007245,4.21e-07,8;UBERON:0010009,4.21e-07,8;UBERON:0010011,4.21e-07,8;UBERON:0000454,4.21e-07,8 | |||
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|short_description=p13@Ldb1 | |||
}} |
Latest revision as of 20:52, 25 September 2015
Short description: | p13@Ldb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Ldb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2265 |
Association with transcript: | -135bp_to_ENSMUST00000152946_5end |
EntrezGene: | Ldb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.12e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.12e-11 | 23 |
neuron of cerebral cortex | 1.06e-10 | 6 |