FFCP PHASE1:Mm9::chr7:133558413..133558436,-: Difference between revisions
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{{FFCP|EntrezGene=12478|HGNC=|MCL_coexpression_id=18|UniProt=P25918,Q3TQG5,Q3U1A5|association_with_transcript=-29bp_to_ENSMUST00000032968,ENSMUST00000167034,NM_009844,uc009jrc.1,uc012ftr.1_5end|description=CAGE_peak_2_at_Cd19_5end|id=chr7:133558413..133558436,-|ontology_enrichment_celltype=CL:0000553!2.16e-08!6;CL:0000556!2.16e-08!6|ontology_enrichment_celltype_v019_2=CL:0000553,7.11e-16,6;CL:0000556,7.11e-16,6;CL:0000050,2.53e-10,9;CL:0002027,3.10e-08,3;CL:0002006,3.10e-08,3;CL:0002024,3.10e-08,3;CL:0000839,6.64e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.95e-09!70;UBERON:0002193!4.73e-09!48;UBERON:0002106!6.82e-08!6;UBERON:0004457!6.82e-08!6;UBERON:0000042!6.82e-08!6;UBERON:0004854!6.82e-08!6;UBERON:0009034!6.82e-08!6;UBERON:0002095!6.82e-08!6;UBERON:0004782!6.82e-08!6;UBERON:0003281!6.82e-08!6;UBERON:0009664!6.82e-08!6;UBERON:0002296!6.82e-08!6;UBERON:0005602!6.82e-08!6;UBERON:0001179!6.82e-08!6;UBERON:0006293!6.82e-08!6;UBERON:0000077!2.95e-07!97;UBERON:0002529!3.82e-07!6;UBERON:0001041!3.94e-07!92;UBERON:0004119!5.42e-07!130;UBERON:0000925!5.42e-07!130;UBERON:0006595!5.42e-07!130;UBERON:0002390!6.19e-07!45;UBERON:0003061!6.19e-07!45;UBERON:0003104!7.53e-07!131;UBERON:0009142!7.53e-07!131;UBERON:0001007!8.10e-07!128;UBERON:0001555!8.10e-07!128;UBERON:0007026!8.10e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.13e-11,6;UBERON:0004457,5.13e-11,6;UBERON:0000042,5.13e-11,6;UBERON:0004854,5.13e-11,6;UBERON:0009034,5.13e-11,6;UBERON:0002095,5.13e-11,6;UBERON:0004782,5.13e-11,6;UBERON:0003281,5.13e-11,6;UBERON:0009664,5.13e-11,6;UBERON:0002296,5.13e-11,6;UBERON:0005602,5.13e-11,6;UBERON:0001179,5.13e-11,6;UBERON:0006293,5.13e-11,6;UBERON:0002193,2.11e-10,48;UBERON:0002405,2.11e-10,48;UBERON:0003887,5.56e-09,10;UBERON:0002465,1.04e-08,3;UBERON:0001474,4.21e-08,22;UBERON:0004765,4.21e-08,22;UBERON:0001434,4.21e-08,22;UBERON:0002390,5.11e-07,45;UBERON:0003061,5.11e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,10.6595123781012,8.90891176515234,1.39912375625629,56.1522654337663,47.4415940275856,62.8096684661085,0.340173160604279,0,0,8.31960598525715,8.25873411841812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.1532162411731,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0,11.9111426477699,0.445326417194474,0,0,0,0,0.117588707135705,0,0,1.01219549843938,1.76922110389975,0.485300549842228,3.97514733228708,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0.41557608911912,0,0,3.4833951770826,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0,0,0,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,1.79763881730844,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0.156998727841375,0,0,0,0,0,0.405720242777006,0.482354319504834,1.01850340712568,1.72617682470486,1.13494658742525,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0,4.24932337383191,0,0,0,0,0,0,0,1.57635144106191,0.664394068946325,1.75400245523236,3.76885623846197,3.9717545829156,1.59113964439663,0,0,0,0.551873492609465,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.948110273807448,0,2.06271086496374,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,1.1659233465194,0,15.8909919142003,0.619160603889667,1.66675074632741,6.96963290917357,18.0436380591753,15.0993594316305,0,0,0.552799895217695,0,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0,0,0,0,0.240390899039938,0.295379054349154,0.504832249740738,0,0.504130925684203,0.779663045918019,1.05833025804362,0.584384510907845,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0.695603506861264|short_description=p2@Cd19}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12478 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=P25918,Q3TQG5,Q3U1A5 | |||
|association_with_transcript=-29bp_to_ENSMUST00000032968,ENSMUST00000167034,NM_009844,uc009jrc.1,uc012ftr.1_5end | |||
|cluster_id=chr7:133558413..133558436,- | |||
|description=CAGE_peak_2_at_Cd19_5end | |||
|id=chr7:133558413..133558436,- | |||
|ontology_enrichment_celltype=CL:0000553!2.16e-08!6;CL:0000556!2.16e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,7.11e-16,6;CL:0000556,7.11e-16,6;CL:0000050,2.53e-10,9;CL:0002027,3.10e-08,3;CL:0002006,3.10e-08,3;CL:0002024,3.10e-08,3;CL:0000839,6.64e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.95e-09!70;UBERON:0002193!4.73e-09!48;UBERON:0002106!6.82e-08!6;UBERON:0004457!6.82e-08!6;UBERON:0000042!6.82e-08!6;UBERON:0004854!6.82e-08!6;UBERON:0009034!6.82e-08!6;UBERON:0002095!6.82e-08!6;UBERON:0004782!6.82e-08!6;UBERON:0003281!6.82e-08!6;UBERON:0009664!6.82e-08!6;UBERON:0002296!6.82e-08!6;UBERON:0005602!6.82e-08!6;UBERON:0001179!6.82e-08!6;UBERON:0006293!6.82e-08!6;UBERON:0000077!2.95e-07!97;UBERON:0002529!3.82e-07!6;UBERON:0001041!3.94e-07!92;UBERON:0004119!5.42e-07!130;UBERON:0000925!5.42e-07!130;UBERON:0006595!5.42e-07!130;UBERON:0002390!6.19e-07!45;UBERON:0003061!6.19e-07!45;UBERON:0003104!7.53e-07!131;UBERON:0009142!7.53e-07!131;UBERON:0001007!8.10e-07!128;UBERON:0001555!8.10e-07!128;UBERON:0007026!8.10e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.13e-11,6;UBERON:0004457,5.13e-11,6;UBERON:0000042,5.13e-11,6;UBERON:0004854,5.13e-11,6;UBERON:0009034,5.13e-11,6;UBERON:0002095,5.13e-11,6;UBERON:0004782,5.13e-11,6;UBERON:0003281,5.13e-11,6;UBERON:0009664,5.13e-11,6;UBERON:0002296,5.13e-11,6;UBERON:0005602,5.13e-11,6;UBERON:0001179,5.13e-11,6;UBERON:0006293,5.13e-11,6;UBERON:0002193,2.11e-10,48;UBERON:0002405,2.11e-10,48;UBERON:0003887,5.56e-09,10;UBERON:0002465,1.04e-08,3;UBERON:0001474,4.21e-08,22;UBERON:0004765,4.21e-08,22;UBERON:0001434,4.21e-08,22;UBERON:0002390,5.11e-07,45;UBERON:0003061,5.11e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,10.6595123781012,8.90891176515234,1.39912375625629,56.1522654337663,47.4415940275856,62.8096684661085,0.340173160604279,0,0,8.31960598525715,8.25873411841812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.1532162411731,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0,11.9111426477699,0.445326417194474,0,0,0,0,0.117588707135705,0,0,1.01219549843938,1.76922110389975,0.485300549842228,3.97514733228708,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0.41557608911912,0,0,3.4833951770826,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0,0,0,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,1.79763881730844,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0.156998727841375,0,0,0,0,0,0.405720242777006,0.482354319504834,1.01850340712568,1.72617682470486,1.13494658742525,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0,4.24932337383191,0,0,0,0,0,0,0,1.57635144106191,0.664394068946325,1.75400245523236,3.76885623846197,3.9717545829156,1.59113964439663,0,0,0,0.551873492609465,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.948110273807448,0,2.06271086496374,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,1.1659233465194,0,15.8909919142003,0.619160603889667,1.66675074632741,6.96963290917357,18.0436380591753,15.0993594316305,0,0,0.552799895217695,0,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0,0,0,0,0.240390899039938,0.295379054349154,0.504832249740738,0,0.504130925684203,0.779663045918019,1.05833025804362,0.584384510907845,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0.695603506861264 | |||
|short_description=p2@Cd19 | |||
}} |
Latest revision as of 20:51, 25 September 2015
Short description: | p2@Cd19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cd19_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -29bp_to_ENSMUST00000032968, ENSMUST00000167034, NM_009844, uc009jrc.1, uc012ftr.1_5end |
EntrezGene: | Cd19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 7.11e-16 | 6 |
megakaryocyte | 7.11e-16 | 6 |
megakaryocyte-erythroid progenitor cell | 2.53e-10 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 3.10e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.10e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.10e-08 | 3 |
myeloid lineage restricted progenitor cell | 6.64e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
spleen | 5.13e-11 | 6 |
cavity lining | 5.13e-11 | 6 |
serous membrane | 5.13e-11 | 6 |
gastrointestinal system mesentery | 5.13e-11 | 6 |
stomach region | 5.13e-11 | 6 |
mesentery | 5.13e-11 | 6 |
gastrointestinal system serosa | 5.13e-11 | 6 |
mesentery of stomach | 5.13e-11 | 6 |
gut mesentery | 5.13e-11 | 6 |
dorsal mesentery | 5.13e-11 | 6 |
dorsal mesogastrium | 5.13e-11 | 6 |
peritoneal cavity | 5.13e-11 | 6 |
spleen primordium | 5.13e-11 | 6 |
hemolymphoid system | 2.11e-10 | 48 |
immune system | 2.11e-10 | 48 |
intraembryonic coelom | 5.56e-09 | 10 |
lymphoid system | 1.04e-08 | 3 |
bone element | 4.21e-08 | 22 |
skeletal element | 4.21e-08 | 22 |
skeletal system | 4.21e-08 | 22 |
hematopoietic system | 5.11e-07 | 45 |
blood island | 5.11e-07 | 45 |