FFCP PHASE1:Mm9::chr14:31304674..31304692,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12289 | |EntrezGene=12289 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=45 | |||
|TSSclassifier=NA | |||
|UniProt=Q99246,Q6PDD2 | |UniProt=Q99246,Q6PDD2 | ||
|association_with_transcript=-332bp_to_ENSMUST00000112250,NM_028981,uc007sux.1,uc007suy.1_5end | |association_with_transcript=-332bp_to_ENSMUST00000112250,NM_028981,uc007sux.1,uc007suy.1_5end | ||
|cluster_id=chr14:31304674..31304692,- | |||
|description=CAGE_peak_6_at_Cacna1d_5end | |description=CAGE_peak_6_at_Cacna1d_5end | ||
|id=chr14:31304674..31304692,- | |id=chr14:31304674..31304692,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.54e-20!18;UBERON:0000948!1.54e-20!18;UBERON:0005498!1.54e-20!18;UBERON:0004140!1.54e-20!18;UBERON:0009881!1.54e-20!18;UBERON:0004141!1.54e-20!18;UBERON:0003084!1.54e-20!18;UBERON:0007005!1.54e-20!18;UBERON:0004139!1.54e-20!18;UBERON:0004291!1.54e-20!18;UBERON:0004535!4.51e-15!23;UBERON:0001009!4.51e-15!23;UBERON:0004872!7.38e-12!33;UBERON:0003103!4.74e-09!43;UBERON:0002048!5.15e-09!14;UBERON:0000117!5.15e-09!14;UBERON:0000171!5.15e-09!14;UBERON:0000170!5.15e-09!14;UBERON:0005597!5.15e-09!14;UBERON:0000118!5.15e-09!14;UBERON:0000991!1.75e-08!18;UBERON:0005564!1.75e-08!18;UBERON:0001048!1.63e-07!147;UBERON:0004176!2.63e-07!17;UBERON:0009196!2.63e-07!17;UBERON:0009117!2.63e-07!17;UBERON:0005153!4.77e-07!17;UBERON:0005178!4.77e-07!17;UBERON:0005181!4.77e-07!17;UBERON:0002224!4.77e-07!17;UBERON:0000915!4.77e-07!17;UBERON:0008947!4.77e-07!17;UBERON:0003258!4.77e-07!17;UBERON:0003133!6.65e-07!24;UBERON:0003914!6.95e-07!47;UBERON:0000464!9.18e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.20e-55,18;UBERON:0000948,2.20e-55,18;UBERON:0005498,2.20e-55,18;UBERON:0004140,2.20e-55,18;UBERON:0009881,2.20e-55,18;UBERON:0004141,2.20e-55,18;UBERON:0003084,2.20e-55,18;UBERON:0007005,2.20e-55,18;UBERON:0004139,2.20e-55,18;UBERON:0004291,2.20e-55,18;UBERON:0004535,5.53e-43,23;UBERON:0001009,5.53e-43,23;UBERON:0004872,1.97e-29,33;UBERON:0003103,3.62e-22,43;UBERON:0003914,4.01e-20,47;UBERON:0000926,1.48e-10,120;UBERON:0004120,1.48e-10,120;UBERON:0006603,1.48e-10,120;UBERON:0003081,5.68e-10,87;UBERON:0010314,2.55e-09,92;UBERON:0001048,3.21e-09,134;UBERON:0000992,1.29e-07,3;UBERON:0000025,4.06e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38841120182192,0,0,0,6.42089894860056,3.28336483973535,3.96136535214233,5.91861838963026,4.72234156193769,2.77680803197281,3.25547522650571,4.56064782379353,1.98501082024188,5.59503489705834,1.97000956894914,1.13496333364198,1.16959989940266,1.09775057645525,0.939444931322602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.977789858652155,0.848725428875941,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,1.78065603667255,1.30309567482861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448549638131936,0,0,0.129159823477731,0.337912250981556,0,0.39061315453185,0.314578033277133,0,0.288030006257865,0,0,0,0,0.358053391334963,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.644613162144895,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38841120182192,0,0,0,6.42089894860056,3.28336483973535,3.96136535214233,5.91861838963026,4.72234156193769,2.77680803197281,3.25547522650571,4.56064782379353,1.98501082024188,5.59503489705834,1.97000956894914,1.13496333364198,1.16959989940266,1.09775057645525,0.939444931322602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.977789858652155,0.848725428875941,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,1.78065603667255,1.30309567482861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448549638131936,0,0,0.129159823477731,0.337912250981556,0,0.39061315453185,0.314578033277133,0,0.288030006257865,0,0,0,0,0.358053391334963,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.644613162144895,0,0,0 | ||
|short_description=p6@Cacna1d | |short_description=p6@Cacna1d | ||
}} | }} |
Latest revision as of 20:48, 25 September 2015
Short description: | p6@Cacna1d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cacna1d_5end |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | -332bp_to_ENSMUST00000112250, NM_028981, uc007sux.1, uc007suy.1_5end |
EntrezGene: | Cacna1d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.20e-55 | 18 |
heart | 2.20e-55 | 18 |
primitive heart tube | 2.20e-55 | 18 |
primary heart field | 2.20e-55 | 18 |
anterior lateral plate mesoderm | 2.20e-55 | 18 |
heart tube | 2.20e-55 | 18 |
heart primordium | 2.20e-55 | 18 |
cardiac mesoderm | 2.20e-55 | 18 |
cardiogenic plate | 2.20e-55 | 18 |
heart rudiment | 2.20e-55 | 18 |
cardiovascular system | 5.53e-43 | 23 |
circulatory system | 5.53e-43 | 23 |
splanchnic layer of lateral plate mesoderm | 1.97e-29 | 33 |
compound organ | 3.62e-22 | 43 |
epithelial tube | 4.01e-20 | 47 |
mesoderm | 1.48e-10 | 120 |
mesoderm-derived structure | 1.48e-10 | 120 |
presumptive mesoderm | 1.48e-10 | 120 |
lateral plate mesoderm | 5.68e-10 | 87 |
structure with developmental contribution from neural crest | 2.55e-09 | 92 |
primordium | 3.21e-09 | 134 |
female gonad | 1.29e-07 | 3 |
tube | 4.06e-07 | 114 |