FFCP PHASE1:Mm9::chr19:45666310..45666368,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=30838 | |EntrezGene=30838 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3132 | |||
|TSSclassifier=NA | |||
|UniProt=E0CXZ3,E0CXV9 | |UniProt=E0CXZ3,E0CXV9 | ||
|association_with_transcript=0bp_to_ENSMUST00000160003,ENSMUST00000162879_5end | |||
|cluster_id=chr19:45666310..45666368,- | |||
|description=CAGE_peak_3_at_Fbxw4_5end | |||
|id=chr19:45666310..45666368,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.05e-15,7;CL:0000034,5.65e-12,97;CL:0002320,9.58e-12,46;CL:0000134,9.58e-12,46;CL:0000219,1.70e-10,54;CL:0000049,3.17e-10,19;CL:0000355,6.94e-10,9;CL:0000723,6.94e-10,91;CL:0000048,6.94e-10,91;CL:0002194,2.27e-09,4;CL:0000766,2.27e-09,4;CL:0000234,2.27e-09,4;CL:0000576,2.27e-09,4;CL:0000235,2.27e-09,4;CL:0000864,2.27e-09,4;CL:0002009,2.27e-09,4;CL:0000040,2.27e-09,4;CL:0000559,2.27e-09,4;CL:0002092,5.65e-08,3;CL:0002540,5.65e-08,3;CL:0000988,7.15e-08,32;CL:0002032,7.15e-08,32;CL:0000037,7.15e-08,32;CL:0000837,7.15e-08,32;CL:0000680,7.56e-08,6;CL:0000187,7.56e-08,6;CL:0000056,7.56e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.87e-11!32;UBERON:0002371!1.62e-08!16;UBERON:0001474!3.09e-08!22;UBERON:0004765!3.09e-08!22;UBERON:0001434!3.09e-08!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.23e-18,32;UBERON:0002371,9.46e-13,16;UBERON:0002384,9.58e-12,46;UBERON:0001474,2.06e-10,22;UBERON:0004765,2.06e-10,22;UBERON:0001434,2.06e-10,22;UBERON:0001134,6.94e-10,9;UBERON:0002036,6.94e-10,9;UBERON:0002385,6.94e-10,9;UBERON:0000486,6.94e-10,9;UBERON:0007503,6.94e-10,9;UBERON:0001015,6.94e-10,9;UBERON:0002329,6.94e-10,9;UBERON:0003082,6.94e-10,9;UBERON:0003059,6.94e-10,9;UBERON:0007282,6.94e-10,9;UBERON:0004290,6.94e-10,9;UBERON:0009618,6.94e-10,9;UBERON:0000383,8.59e-09,10;UBERON:0007524,6.72e-08,11;UBERON:0003077,6.72e-08,11;UBERON:0007285,6.72e-08,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0.699561878128147,0.315462165358238,0.685572168028694,0.42438965179803,0.340173160604279,42.397236162778,60.0759515019551,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.408338712524738,0.837063261473815,5.4693474116666,3.14114246384279,0,0,1.45653105909346,1.38486499773135,2.43304634926835,2.38610777810186,1.56478268869608,0,0.439372365468944,0.194429899074283,0.839918529752175,0,0,0,0,2.31533492432352,1.71920063963254,0,0.202316460859598,0.528990979272033,0,5.42151251310611,2.66788438833342,17.997994345628,30.6548572395762,27.7087244828979,9.88680364710736,5.76327457982332,0,0,0,0,0,0,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.61119299110724,0.294628585473668,0.142371680799103,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0.170430322578058,0.779358013808606,1.06001872353102,0,5.13305909657271,0,7.11066703153331,1.29894624606728,1.26679932737549,1.01104889002957,0,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,2.65383165584962,0.485300549842228,0.220841518460394,0.484875253135222,0,0.585561594023094,0.209446706813455,0,15.9354115592874,23.3962065087429,12.4528822531603,0.599162557619291,0.457500602818626,0,0.695297280769106,0,0.20778804455956,0.486723789203273,0.305518091550949,1.24406970610093,0.505445516867349,0,0,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0.199034266818493,17.5553296828309,16.7276139624565,10.5140494776369,0,0.234526059981096,0.180062061461015,0.473489471170421,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.405344047729279,0.292399974850665,0.878200461164203,0.671032093801859,0.420579897128254,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.140271639780637,0.379419222745544,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0,1.10851914099963,0.189491411770485,0.651859905768103,0,0.704070744865506,0.502518772325447,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0,0.491589944147214,0.863424909329478,0.433947175744535,16.5870412333199,13.053736411649,3.93411418415229,3.86311444826625,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0.809621403349789,1.16902343164525,0,0.321321316421807,0.567760340833074,0.178065603667255,0.162886959353576,1.31976098378028,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0.36012218806262,0,0,0.354680467284547,0.713475270408282,0.329098041204242,0,0,0,0.220528398054962,0.65954501176592,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,0.683483523191411,0.412773735926445,0.370389054739423,0.188368457004691,0.546776910884101,0.457556346413045,4.24946074984638,7.41742697315387,4.42239916174156,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0.209718688851422,0.483168241652012,0,0.316011120628178,0.608175645870493,0.718976700153791,0,0.179026695667481,0.198681354781265,0.360586348559907,0.295379054349154,0.403865799792591,0,0,0.38983152295901,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,1.87682475451182,1.46521299413812,0.428736758158132,0,0,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.37456602987953,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.499621155875892,0,0.429742108096597,0,0.441182838239031,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0.699561878128147,0.315462165358238,0.685572168028694,0.42438965179803,0.340173160604279,42.397236162778,60.0759515019551,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.408338712524738,0.837063261473815,5.4693474116666,3.14114246384279,0,0,1.45653105909346,1.38486499773135,2.43304634926835,2.38610777810186,1.56478268869608,0,0.439372365468944,0.194429899074283,0.839918529752175,0,0,0,0,2.31533492432352,1.71920063963254,0,0.202316460859598,0.528990979272033,0,5.42151251310611,2.66788438833342,17.997994345628,30.6548572395762,27.7087244828979,9.88680364710736,5.76327457982332,0,0,0,0,0,0,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.61119299110724,0.294628585473668,0.142371680799103,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0.170430322578058,0.779358013808606,1.06001872353102,0,5.13305909657271,0,7.11066703153331,1.29894624606728,1.26679932737549,1.01104889002957,0,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,2.65383165584962,0.485300549842228,0.220841518460394,0.484875253135222,0,0.585561594023094,0.209446706813455,0,15.9354115592874,23.3962065087429,12.4528822531603,0.599162557619291,0.457500602818626,0,0.695297280769106,0,0.20778804455956,0.486723789203273,0.305518091550949,1.24406970610093,0.505445516867349,0,0,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0.199034266818493,17.5553296828309,16.7276139624565,10.5140494776369,0,0.234526059981096,0.180062061461015,0.473489471170421,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.405344047729279,0.292399974850665,0.878200461164203,0.671032093801859,0.420579897128254,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.140271639780637,0.379419222745544,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0,1.10851914099963,0.189491411770485,0.651859905768103,0,0.704070744865506,0.502518772325447,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0,0.491589944147214,0.863424909329478,0.433947175744535,16.5870412333199,13.053736411649,3.93411418415229,3.86311444826625,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0.809621403349789,1.16902343164525,0,0.321321316421807,0.567760340833074,0.178065603667255,0.162886959353576,1.31976098378028,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0.36012218806262,0,0,0.354680467284547,0.713475270408282,0.329098041204242,0,0,0,0.220528398054962,0.65954501176592,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,0.683483523191411,0.412773735926445,0.370389054739423,0.188368457004691,0.546776910884101,0.457556346413045,4.24946074984638,7.41742697315387,4.42239916174156,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0.209718688851422,0.483168241652012,0,0.316011120628178,0.608175645870493,0.718976700153791,0,0.179026695667481,0.198681354781265,0.360586348559907,0.295379054349154,0.403865799792591,0,0,0.38983152295901,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,1.87682475451182,1.46521299413812,0.428736758158132,0,0,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.37456602987953,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.499621155875892,0,0.429742108096597,0,0.441182838239031,0.463735671240843 | ||
|short_description=p3@Fbxw4 | |||
}} | }} |
Latest revision as of 20:38, 25 September 2015
Short description: | p3@Fbxw4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fbxw4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3132 |
Association with transcript: | 0bp_to_ENSMUST00000160003, ENSMUST00000162879_5end |
EntrezGene: | Fbxw4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.05e-15 | 7 |
stem cell | 5.65e-12 | 97 |
connective tissue cell | 9.58e-12 | 46 |
mesenchymal cell | 9.58e-12 | 46 |
motile cell | 1.70e-10 | 54 |
common myeloid progenitor | 3.17e-10 | 19 |
multi-potent skeletal muscle stem cell | 6.94e-10 | 9 |
somatic stem cell | 6.94e-10 | 91 |
multi fate stem cell | 6.94e-10 | 91 |
monopoietic cell | 2.27e-09 | 4 |
myeloid leukocyte | 2.27e-09 | 4 |
phagocyte | 2.27e-09 | 4 |
monocyte | 2.27e-09 | 4 |
macrophage | 2.27e-09 | 4 |
tissue-resident macrophage | 2.27e-09 | 4 |
macrophage dendritic cell progenitor | 2.27e-09 | 4 |
monoblast | 2.27e-09 | 4 |
promonocyte | 2.27e-09 | 4 |
bone marrow cell | 5.65e-08 | 3 |
mesenchymal stem cell of the bone marrow | 5.65e-08 | 3 |
hematopoietic cell | 7.15e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.15e-08 | 32 |
hematopoietic stem cell | 7.15e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.15e-08 | 32 |
muscle precursor cell | 7.56e-08 | 6 |
muscle cell | 7.56e-08 | 6 |
myoblast | 7.56e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.23e-18 | 32 |
bone marrow | 9.46e-13 | 16 |
connective tissue | 9.58e-12 | 46 |
bone element | 2.06e-10 | 22 |
skeletal element | 2.06e-10 | 22 |
skeletal system | 2.06e-10 | 22 |
skeletal muscle tissue | 6.94e-10 | 9 |
striated muscle tissue | 6.94e-10 | 9 |
muscle tissue | 6.94e-10 | 9 |
multilaminar epithelium | 6.94e-10 | 9 |
epithelial vesicle | 6.94e-10 | 9 |
musculature | 6.94e-10 | 9 |
somite | 6.94e-10 | 9 |
myotome | 6.94e-10 | 9 |
presomitic mesoderm | 6.94e-10 | 9 |
presumptive segmental plate | 6.94e-10 | 9 |
dermomyotome | 6.94e-10 | 9 |
trunk paraxial mesoderm | 6.94e-10 | 9 |
musculature of body | 8.59e-09 | 10 |
dense mesenchyme tissue | 6.72e-08 | 11 |
paraxial mesoderm | 6.72e-08 | 11 |
presumptive paraxial mesoderm | 6.72e-08 | 11 |