FFCP PHASE1:Mm9::chr5:23919200..23919216,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=171209|HGNC=|MCL_coexpression_id=16|UniProt=Q6X1Y6|association_with_transcript=-52bp_to_ENSMUST00000049346,ENSMUST00000115065,NM_183000,uc008wrj.1,uc008wrk.1_5end|description=CAGE_peak_1_at_Accn3_5end|id=chr5:23919200..23919216,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000020!1.95e-08!12;UBERON:0001032!1.95e-08!12;UBERON:0004456!1.95e-08!12;UBERON:0000970!7.55e-08!9;UBERON:0000019!7.55e-08!9;UBERON:0000047!7.55e-08!9;UBERON:0004088!7.55e-08!9;UBERON:0002104!7.55e-08!9;UBERON:0001456!7.55e-08!9;UBERON:0003072!7.55e-08!9;UBERON:0003071!7.55e-08!9;UBERON:0004128!7.55e-08!9;UBERON:0005085!1.95e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000020,3.18e-14,12;UBERON:0001032,3.18e-14,12;UBERON:0004456,3.18e-14,12;UBERON:0000033,6.74e-13,13;UBERON:0005085,6.74e-13,13;UBERON:0000970,1.18e-12,9;UBERON:0000019,1.18e-12,9;UBERON:0000047,1.18e-12,9;UBERON:0010312,1.18e-12,9;UBERON:0004088,1.18e-12,9;UBERON:0002104,1.18e-12,9;UBERON:0001456,1.18e-12,9;UBERON:0003072,1.18e-12,9;UBERON:0004128,1.18e-12,9;UBERON:0003071,1.18e-12,9;UBERON:0001444,5.84e-10,11|phase1_expression=35.5530440572643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,7.16333599846892,2.06268836910977,0.606949382578793,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0,0,0,0.142371680799103,2.23679334990361,1.36307147999731,2.72057616384428,0,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0,24.0842247818124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0.884610551949874,0.485300549842228,1.98757366614354,4.363877278217,0,0,0,0,0.958520996047362,0.599902730993408,0.635351135365324,0.299581278809645,0,0,0,0,0.20778804455956,0,0.305518091550949,6.34475550111474,0,14.9413717679397,1.56144531555244,1.37941262660084,1.44049703844279,2.26057226753573,4.21826294738233,4.22775276940004,3.09215691047105,62.0888089773638,0.215567992932842,2.45837904218165,1.40760899331159,0.43839146485515,0.834141747676794,0,0,0.796137067273973,0,0,0,0,0.703578179943289,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,0,0.514523061896422,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.342745537829186,0,0.407302655690628,0.193952487167626,0.49095073923223,0.379419222745544,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0,0,1.24645922567079,1.14020871547503,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0,0.516856586336442,0,0,0,0,0,0,0.36012218806262,0.776152102696527,2.14337035031592,14.3645589250242,12.4858172321449,10.5311373185357,12.4830629136986,0,0,0,0.65954501176592,0.484393280087717,0.180938774784468,0,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0,0,0,0,1.86976272993241,0.979660166265606,2.21119958087078,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0.598066184175915,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,0,0.405450430580328,0,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.504832249740738,0.533447646584999,0.403304740547362,0.292373642219257,0.288635524920988,0.350630706544707,0,0,0,0.167884616364078,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,1.59609949360412,1.53660245178721,1.70174701947806,0.419226325255965,0.919217542250071,2.22246727801615,1.64828045791115,2.24643446714271,1.76888048234658,3.8021894983536,2.82939512079114,1.21733959710847,1.28050304809739,2.1825478203133,1.90517476513229,1.27472758539341,1.73618298417335,0.824171801606613,1.91358596174717,2.40008476669791,1.77475806159337,0.953744759789284,1.59881058295561,1.2234219453993,1.86152137361688,2.19513567447327,1.31534855718921,2.17286582153379,2.80571135828869,1.66089025373844,2.1670986122624,2.04615521584845,1.08455788830176,1.15743966588685,0.749431733813838,1.63752125911786,1.93383948643468,3.06061331310149,1.76473135295612,2.08681052058379|short_description=p1@Accn3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=171209 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=Q6X1Y6 | |||
|association_with_transcript=-52bp_to_ENSMUST00000049346,ENSMUST00000115065,NM_183000,uc008wrj.1,uc008wrk.1_5end | |||
|cluster_id=chr5:23919200..23919216,+ | |||
|description=CAGE_peak_1_at_Accn3_5end | |||
|id=chr5:23919200..23919216,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000020!1.95e-08!12;UBERON:0001032!1.95e-08!12;UBERON:0004456!1.95e-08!12;UBERON:0000970!7.55e-08!9;UBERON:0000019!7.55e-08!9;UBERON:0000047!7.55e-08!9;UBERON:0004088!7.55e-08!9;UBERON:0002104!7.55e-08!9;UBERON:0001456!7.55e-08!9;UBERON:0003072!7.55e-08!9;UBERON:0003071!7.55e-08!9;UBERON:0004128!7.55e-08!9;UBERON:0005085!1.95e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000020,3.18e-14,12;UBERON:0001032,3.18e-14,12;UBERON:0004456,3.18e-14,12;UBERON:0000033,6.74e-13,13;UBERON:0005085,6.74e-13,13;UBERON:0000970,1.18e-12,9;UBERON:0000019,1.18e-12,9;UBERON:0000047,1.18e-12,9;UBERON:0010312,1.18e-12,9;UBERON:0004088,1.18e-12,9;UBERON:0002104,1.18e-12,9;UBERON:0001456,1.18e-12,9;UBERON:0003072,1.18e-12,9;UBERON:0004128,1.18e-12,9;UBERON:0003071,1.18e-12,9;UBERON:0001444,5.84e-10,11 | |||
|phase1_expression=35.5530440572643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,7.16333599846892,2.06268836910977,0.606949382578793,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0,0,0,0.142371680799103,2.23679334990361,1.36307147999731,2.72057616384428,0,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0,24.0842247818124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0.884610551949874,0.485300549842228,1.98757366614354,4.363877278217,0,0,0,0,0.958520996047362,0.599902730993408,0.635351135365324,0.299581278809645,0,0,0,0,0.20778804455956,0,0.305518091550949,6.34475550111474,0,14.9413717679397,1.56144531555244,1.37941262660084,1.44049703844279,2.26057226753573,4.21826294738233,4.22775276940004,3.09215691047105,62.0888089773638,0.215567992932842,2.45837904218165,1.40760899331159,0.43839146485515,0.834141747676794,0,0,0.796137067273973,0,0,0,0,0.703578179943289,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,0,0.514523061896422,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.342745537829186,0,0.407302655690628,0.193952487167626,0.49095073923223,0.379419222745544,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0,0,1.24645922567079,1.14020871547503,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0,0.516856586336442,0,0,0,0,0,0,0.36012218806262,0.776152102696527,2.14337035031592,14.3645589250242,12.4858172321449,10.5311373185357,12.4830629136986,0,0,0,0.65954501176592,0.484393280087717,0.180938774784468,0,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0,0,0,0,1.86976272993241,0.979660166265606,2.21119958087078,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0.598066184175915,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,0,0.405450430580328,0,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.504832249740738,0.533447646584999,0.403304740547362,0.292373642219257,0.288635524920988,0.350630706544707,0,0,0,0.167884616364078,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,1.59609949360412,1.53660245178721,1.70174701947806,0.419226325255965,0.919217542250071,2.22246727801615,1.64828045791115,2.24643446714271,1.76888048234658,3.8021894983536,2.82939512079114,1.21733959710847,1.28050304809739,2.1825478203133,1.90517476513229,1.27472758539341,1.73618298417335,0.824171801606613,1.91358596174717,2.40008476669791,1.77475806159337,0.953744759789284,1.59881058295561,1.2234219453993,1.86152137361688,2.19513567447327,1.31534855718921,2.17286582153379,2.80571135828869,1.66089025373844,2.1670986122624,2.04615521584845,1.08455788830176,1.15743966588685,0.749431733813838,1.63752125911786,1.93383948643468,3.06061331310149,1.76473135295612,2.08681052058379 | |||
|short_description=p1@Accn3 | |||
}} |
Latest revision as of 20:33, 25 September 2015
Short description: | p1@Accn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Accn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | -52bp_to_ENSMUST00000049346, ENSMUST00000115065, NM_183000, uc008wrj.1, uc008wrk.1_5end |
EntrezGene: | Accn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sense organ | 3.18e-14 | 12 |
sensory system | 3.18e-14 | 12 |
entire sense organ system | 3.18e-14 | 12 |
head | 6.74e-13 | 13 |
ectodermal placode | 6.74e-13 | 13 |
eye | 1.18e-12 | 9 |
camera-type eye | 1.18e-12 | 9 |
simple eye | 1.18e-12 | 9 |
immature eye | 1.18e-12 | 9 |
ocular region | 1.18e-12 | 9 |
visual system | 1.18e-12 | 9 |
face | 1.18e-12 | 9 |
optic cup | 1.18e-12 | 9 |
optic vesicle | 1.18e-12 | 9 |
eye primordium | 1.18e-12 | 9 |
subdivision of head | 5.84e-10 | 11 |