FFCP PHASE1:Mm9::chr5:23898308..23898312,-: Difference between revisions
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{{FFCP|EntrezGene=213948|HGNC=|MCL_coexpression_id=892|UniProt=F8VQL8,Q6EBV9|association_with_transcript=-347bp_to_ENSMUST00000059401,NM_001002897,uc008wrf.1_5end|description=CAGE_peak_5_at_Atg9b_5end|id=chr5:23898308..23898312,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,6.38e-15,3;CL:0002202,6.38e-15,3;CL:0000069,6.38e-15,3;CL:0002632,6.38e-15,3;CL:0002368,6.38e-15,3;CL:0000307,6.38e-15,3;CL:0000377,6.38e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000474!4.05e-09!9;UBERON:0000014!4.94e-09!5;UBERON:0001003!4.94e-09!5;UBERON:0002097!4.94e-09!5;UBERON:0002199!4.94e-09!5;UBERON:0007029!4.94e-09!5;UBERON:0007376!4.94e-09!5;UBERON:0002416!4.94e-09!5;UBERON:0007383!4.94e-09!5;UBERON:0003134!6.21e-08!8;UBERON:0003975!1.85e-07!5;UBERON:0003100!3.76e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.05e-25,5;UBERON:0001003,8.05e-25,5;UBERON:0002097,8.05e-25,5;UBERON:0002199,8.05e-25,5;UBERON:0007029,8.05e-25,5;UBERON:0007376,8.05e-25,5;UBERON:0002416,8.05e-25,5;UBERON:0007383,8.05e-25,5;UBERON:0003102,1.36e-16,22;UBERON:0003126,6.38e-15,3;UBERON:0001005,6.38e-15,3;UBERON:0007196,6.38e-15,3;UBERON:0001558,6.38e-15,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89683873820185,5.06719730950197,3.0331466700887,0,0,0,0,0,0,0,0,0,11.3709685157812,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,3.1342694986995,2.05782136407943,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0.605050573870028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,8.244312647074,6.29711264114032,4.82503399425247,9.43041517624778,10.3408766839389,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.216010681643603,1.25452977608681,1.52853794622324,0.539457385539283,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,3.62768613784338,0.221985953374065,0.0897138566094757,0,0,0.563047426353546,1.46521299413812,3.21552568618599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.37456602987953,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0.548783918618318,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.964533054905707,0,1.16965804222704,2.14871054048298,0.765153328275374,0,0|short_description=p5@Atg9b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=213948 | |||
|HGNC= | |||
|MCL_coexpression_id=892 | |||
|TSSclassifier=NA | |||
|UniProt=F8VQL8,Q6EBV9 | |||
|association_with_transcript=-347bp_to_ENSMUST00000059401,NM_001002897,uc008wrf.1_5end | |||
|cluster_id=chr5:23898308..23898312,- | |||
|description=CAGE_peak_5_at_Atg9b_5end | |||
|id=chr5:23898308..23898312,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.38e-15,3;CL:0002202,6.38e-15,3;CL:0000069,6.38e-15,3;CL:0002632,6.38e-15,3;CL:0002368,6.38e-15,3;CL:0000307,6.38e-15,3;CL:0000377,6.38e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!4.05e-09!9;UBERON:0000014!4.94e-09!5;UBERON:0001003!4.94e-09!5;UBERON:0002097!4.94e-09!5;UBERON:0002199!4.94e-09!5;UBERON:0007029!4.94e-09!5;UBERON:0007376!4.94e-09!5;UBERON:0002416!4.94e-09!5;UBERON:0007383!4.94e-09!5;UBERON:0003134!6.21e-08!8;UBERON:0003975!1.85e-07!5;UBERON:0003100!3.76e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.05e-25,5;UBERON:0001003,8.05e-25,5;UBERON:0002097,8.05e-25,5;UBERON:0002199,8.05e-25,5;UBERON:0007029,8.05e-25,5;UBERON:0007376,8.05e-25,5;UBERON:0002416,8.05e-25,5;UBERON:0007383,8.05e-25,5;UBERON:0003102,1.36e-16,22;UBERON:0003126,6.38e-15,3;UBERON:0001005,6.38e-15,3;UBERON:0007196,6.38e-15,3;UBERON:0001558,6.38e-15,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89683873820185,5.06719730950197,3.0331466700887,0,0,0,0,0,0,0,0,0,11.3709685157812,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,3.1342694986995,2.05782136407943,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0.605050573870028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,8.244312647074,6.29711264114032,4.82503399425247,9.43041517624778,10.3408766839389,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.216010681643603,1.25452977608681,1.52853794622324,0.539457385539283,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,3.62768613784338,0.221985953374065,0.0897138566094757,0,0,0.563047426353546,1.46521299413812,3.21552568618599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.37456602987953,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0.548783918618318,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.964533054905707,0,1.16965804222704,2.14871054048298,0.765153328275374,0,0 | |||
|short_description=p5@Atg9b | |||
}} |
Latest revision as of 20:32, 25 September 2015
Short description: | p5@Atg9b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Atg9b_5end |
Coexpression cluster: | MCL_coexpression_mm9:892 |
Association with transcript: | -347bp_to_ENSMUST00000059401, NM_001002897, uc008wrf.1_5end |
EntrezGene: | Atg9b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.38e-15 | 3 |
epithelial cell of tracheobronchial tree | 6.38e-15 | 3 |
branched duct epithelial cell | 6.38e-15 | 3 |
epithelial cell of lower respiratory tract | 6.38e-15 | 3 |
respiratory epithelial cell | 6.38e-15 | 3 |
tracheal epithelial cell | 6.38e-15 | 3 |
tracheoblast | 6.38e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 8.05e-25 | 5 |
skin epidermis | 8.05e-25 | 5 |
skin of body | 8.05e-25 | 5 |
integument | 8.05e-25 | 5 |
surface | 8.05e-25 | 5 |
outer epithelium | 8.05e-25 | 5 |
integumental system | 8.05e-25 | 5 |
enveloping layer of ectoderm | 8.05e-25 | 5 |
surface structure | 1.36e-16 | 22 |
trachea | 6.38e-15 | 3 |
respiratory airway | 6.38e-15 | 3 |
tracheobronchial tree | 6.38e-15 | 3 |
lower respiratory tract | 6.38e-15 | 3 |