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FFCP PHASE1:Mm9::chr8:85689555..85689576,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:85689555..85689576,+
|DHSsupport=NA
|short_description=p7@Tbc1d9
|DPIdataset=NA
|description=CAGE_peak_7_at_Tbc1d9_5end
|association_with_transcript=-182bp_to_ENSMUST00000093393_5end
|EntrezGene=71310
|EntrezGene=71310
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3UYK3
|UniProt=Q3UYK3
|association_with_transcript=-182bp_to_ENSMUST00000093393_5end
|cluster_id=chr8:85689555..85689576,+
|description=CAGE_peak_7_at_Tbc1d9_5end
|id=chr8:85689555..85689576,+
|ontology_enrichment_celltype=CL:0000117!5.12e-10!23;CL:0000337!5.12e-10!23;CL:0000221!4.04e-09!44;CL:0000133!4.04e-09!44;CL:0000540!5.97e-09!33;CL:0000047!5.97e-09!33;CL:0000031!5.97e-09!33;CL:0000404!5.97e-09!33;CL:0002319!6.67e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,6.84e-15,23;CL:0000337,6.84e-15,23;CL:0000540,1.86e-10,33;CL:0000047,1.86e-10,33;CL:0000031,1.86e-10,33;CL:0000404,1.86e-10,33;CL:0002319,4.43e-09,43;CL:0000221,9.09e-09,44;CL:0000133,9.09e-09,44;CL:0000393,3.34e-08,39;CL:0000211,3.34e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.05e-23!75;UBERON:0001016!3.05e-23!75;UBERON:0001017!1.93e-22!73;UBERON:0005743!1.93e-22!73;UBERON:0004121!1.71e-21!102;UBERON:0000924!1.71e-21!102;UBERON:0006601!1.71e-21!102;UBERON:0002346!1.19e-20!71;UBERON:0003075!1.19e-20!71;UBERON:0007284!1.19e-20!71;UBERON:0000033!1.52e-20!63;UBERON:0001049!6.86e-19!52;UBERON:0005068!6.86e-19!52;UBERON:0006241!6.86e-19!52;UBERON:0007135!6.86e-19!52;UBERON:0000955!2.28e-18!50;UBERON:0006238!2.28e-18!50;UBERON:0002616!9.37e-18!49;UBERON:0003056!3.15e-17!49;UBERON:0002020!3.50e-15!34;UBERON:0003080!4.16e-14!40;UBERON:0002780!1.64e-13!39;UBERON:0001890!1.64e-13!39;UBERON:0006240!1.64e-13!39;UBERON:0002791!8.46e-13!29;UBERON:0003528!8.46e-13!29;UBERON:0001893!8.46e-13!29;UBERON:0007811!8.88e-11!86;UBERON:0000956!5.65e-09!21;UBERON:0001869!5.65e-09!21;UBERON:0000203!5.65e-09!21;UBERON:0000153!7.77e-09!94;UBERON:0002021!8.19e-08!10;UBERON:0000411!8.19e-08!10;UBERON:0001950!8.19e-08!10;UBERON:0002619!1.00e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.16e-32,75;UBERON:0001017,2.82e-31,73;UBERON:0000073,3.84e-30,54;UBERON:0004121,1.59e-28,95;UBERON:0000924,1.59e-28,95;UBERON:0006601,1.59e-28,95;UBERON:0001049,3.76e-27,52;UBERON:0005068,3.76e-27,52;UBERON:0006241,3.76e-27,52;UBERON:0007135,3.76e-27,52;UBERON:0002346,1.20e-26,64;UBERON:0003075,1.20e-26,64;UBERON:0007284,1.20e-26,64;UBERON:0010371,3.71e-22,73;UBERON:0000955,1.08e-21,47;UBERON:0006238,1.08e-21,47;UBERON:0002020,1.77e-21,34;UBERON:0002616,1.84e-20,46;UBERON:0003056,1.58e-17,49;UBERON:0002021,3.49e-17,10;UBERON:0000411,3.49e-17,10;UBERON:0001950,3.49e-17,10;UBERON:0003080,3.44e-16,40;UBERON:0003528,3.70e-16,29;UBERON:0002791,3.70e-16,29;UBERON:0001893,3.70e-16,29;UBERON:0010314,1.36e-15,92;UBERON:0002780,5.04e-15,39;UBERON:0001890,5.04e-15,39;UBERON:0006240,5.04e-15,39;UBERON:0002619,4.27e-13,17;UBERON:0003076,2.09e-12,12;UBERON:0003057,2.09e-12,12;UBERON:0000956,5.72e-12,21;UBERON:0001869,5.72e-12,21;UBERON:0000203,5.72e-12,21;UBERON:0000025,4.16e-09,114;UBERON:0004111,1.20e-08,122;UBERON:0002240,1.66e-08,6;UBERON:0005174,1.66e-08,6;UBERON:0001137,1.66e-08,6;UBERON:0002950,7.17e-08,4;UBERON:0001891,7.17e-08,4;UBERON:0009616,7.17e-08,4;UBERON:0010286,7.17e-08,4;UBERON:0011216,1.79e-07,194;UBERON:0001948,5.43e-07,5;UBERON:0002315,5.43e-07,5
|phase1_expression=0.80074423552397,0,0,0.60492842261366,0.500895729946347,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0.630924330716475,0.274228867211478,0,0.935476191661768,0,0,0,0.22940928106717,0.57423196411502,0.86152399231815,0.646413698057667,0,0.504060259519861,0,0,0,0,0.866554859253824,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0,0.218025156380447,0.878744730937887,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.1691570175309,0.338844532069132,0,0.899899717281399,0,0.7104801149461,0.599200221036809,0,0.933206510776299,0.675029691658453,0.420649922702764,1.42825492201902,1.54607978666129,0.857435594504678,0.383381884072945,0,5.50579404996943,5.2351808614927,4.6081959976873,2.50583946687368,3.20206752608434,0.52091337055676,5.30447698102624,5.6276261003168,4.43114918552749,1.17851434189467,1.13897344639282,1.67759501242771,0.530083353332288,1.5870027622425,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,1.51657333504435,0.11418387971906,0.776813650941515,0.593768556259299,0.173485326766136,0,0.461230994512117,0.301445281105245,0.940709657085638,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,9.9545470983926,7.95897485891129,0,0.479260498023681,0,0.254140454146129,3.74476598512057,0.915001205637253,0.753926112677186,5.04090528557602,7.92717917724025,3.74018480207208,2.59586020908412,0.203678727700633,0.248813941220186,1.0108910337347,0.210441855886474,0.520481771850815,0.919608417733892,0.900310649026746,1.65775299619287,1.56483948048054,1.7935920839879,1.3118241438362,0.776110112217047,0.215567992932842,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,3.57492912559016,2.16099685996497,0,0.264450566663544,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0.387904974335251,0.210407459670956,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0.318909537314974,0,0,0.433947175744535,3.01582567878545,3.80733978673097,0,0.275936746304732,5.45872005958493,5.74337264301796,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,1.69845918473299,0,0.292255857911312,0.395287777946524,3.53453448063988,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0.906970670894253,0.377210159511796,0.295301892880773,0,0.516856586336442,0,0.712994756769443,0,0,0,1.02131881726136,0.540183282093931,0,0.214337035031592,0.532020700926821,0.535106452806212,0.164549020602121,0.608929898229199,0,0,0.441056796109924,0.49465875882444,0,0.120625849856312,0,0,0.582961673259701,4.45020724825223,0.512612642393558,0.206386867963223,0.370389054739423,0,0.136694227721025,0.228778173206523,1.01987057996313,0.559805809294632,0.552799895217695,0,0.158167996790568,0.406638934253697,0.216010681643603,0.209088296014469,0.436725127492355,0.404593039154462,0.495920734352016,0,0.129614973291793,0,0,0.149516546043979,0,0.388902376688095,0,0.337912250981556,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0.632022241256357,0,0.410843828659309,0,0.179026695667481,0,0.120195449519969,0,0,0.15241361331,0,0.194915761479505,0.288635524920988,0.584384510907845,0,0,0,0,1.54551675225752,0,0.183151624267265,0.428736758158132,0.501572104035363,3.95326289831947,4.60325236507177,3.43737308063638,3.78077001156113,8.22099023724771,3.0215755895588,6.75022500231806,3.15224842256954,6.79713613476307,7.24864436452548,0.31136204275253,0.798049746802062,1.02440163452481,0.729320151204882,0.209613162627982,1.10306105070008,0.888986911206461,0,0.320919209591815,0.505394423527595,0,0.377252682772152,0.187283014939765,0.320125762024346,0.459483751644906,0.476293691283074,0.463537303779422,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.338458431566706,0,0.526139422875686,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.77468420592983,0.192906610981141,0.249810577937946,0,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843
|phase1_expression=0.80074423552397,0,0,0.60492842261366,0.500895729946347,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0.630924330716475,0.274228867211478,0,0.935476191661768,0,0,0,0.22940928106717,0.57423196411502,0.86152399231815,0.646413698057667,0,0.504060259519861,0,0,0,0,0.866554859253824,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0,0.218025156380447,0.878744730937887,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.1691570175309,0.338844532069132,0,0.899899717281399,0,0.7104801149461,0.599200221036809,0,0.933206510776299,0.675029691658453,0.420649922702764,1.42825492201902,1.54607978666129,0.857435594504678,0.383381884072945,0,5.50579404996943,5.2351808614927,4.6081959976873,2.50583946687368,3.20206752608434,0.52091337055676,5.30447698102624,5.6276261003168,4.43114918552749,1.17851434189467,1.13897344639282,1.67759501242771,0.530083353332288,1.5870027622425,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,1.51657333504435,0.11418387971906,0.776813650941515,0.593768556259299,0.173485326766136,0,0.461230994512117,0.301445281105245,0.940709657085638,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,9.9545470983926,7.95897485891129,0,0.479260498023681,0,0.254140454146129,3.74476598512057,0.915001205637253,0.753926112677186,5.04090528557602,7.92717917724025,3.74018480207208,2.59586020908412,0.203678727700633,0.248813941220186,1.0108910337347,0.210441855886474,0.520481771850815,0.919608417733892,0.900310649026746,1.65775299619287,1.56483948048054,1.7935920839879,1.3118241438362,0.776110112217047,0.215567992932842,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,3.57492912559016,2.16099685996497,0,0.264450566663544,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0.387904974335251,0.210407459670956,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0.318909537314974,0,0,0.433947175744535,3.01582567878545,3.80733978673097,0,0.275936746304732,5.45872005958493,5.74337264301796,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,1.69845918473299,0,0.292255857911312,0.395287777946524,3.53453448063988,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0.906970670894253,0.377210159511796,0.295301892880773,0,0.516856586336442,0,0.712994756769443,0,0,0,1.02131881726136,0.540183282093931,0,0.214337035031592,0.532020700926821,0.535106452806212,0.164549020602121,0.608929898229199,0,0,0.441056796109924,0.49465875882444,0,0.120625849856312,0,0,0.582961673259701,4.45020724825223,0.512612642393558,0.206386867963223,0.370389054739423,0,0.136694227721025,0.228778173206523,1.01987057996313,0.559805809294632,0.552799895217695,0,0.158167996790568,0.406638934253697,0.216010681643603,0.209088296014469,0.436725127492355,0.404593039154462,0.495920734352016,0,0.129614973291793,0,0,0.149516546043979,0,0.388902376688095,0,0.337912250981556,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0.632022241256357,0,0.410843828659309,0,0.179026695667481,0,0.120195449519969,0,0,0.15241361331,0,0.194915761479505,0.288635524920988,0.584384510907845,0,0,0,0,1.54551675225752,0,0.183151624267265,0.428736758158132,0.501572104035363,3.95326289831947,4.60325236507177,3.43737308063638,3.78077001156113,8.22099023724771,3.0215755895588,6.75022500231806,3.15224842256954,6.79713613476307,7.24864436452548,0.31136204275253,0.798049746802062,1.02440163452481,0.729320151204882,0.209613162627982,1.10306105070008,0.888986911206461,0,0.320919209591815,0.505394423527595,0,0.377252682772152,0.187283014939765,0.320125762024346,0.459483751644906,0.476293691283074,0.463537303779422,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.338458431566706,0,0.526139422875686,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.77468420592983,0.192906610981141,0.249810577937946,0,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843
|short_description=p7@Tbc1d9
}}
}}

Latest revision as of 20:29, 25 September 2015

Short description:p7@Tbc1d9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Tbc1d9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -182bp_to_ENSMUST00000093393_5end
EntrezGene:Tbc1d9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Tbc1d9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.84e-1523
neuroblast (sensu Vertebrata)6.84e-1523
neuron1.86e-1033
neuronal stem cell1.86e-1033
neuroblast1.86e-1033
electrically signaling cell1.86e-1033
neural cell4.43e-0943
ectodermal cell9.09e-0944
neurectodermal cell9.09e-0944
electrically responsive cell3.34e-0839
electrically active cell3.34e-0839

Uber anatomy
Ontology termp-valuen
nervous system7.16e-3275
central nervous system2.82e-3173
regional part of nervous system3.84e-3054
ectoderm-derived structure1.59e-2895
ectoderm1.59e-2895
presumptive ectoderm1.59e-2895
neural tube3.76e-2752
neural rod3.76e-2752
future spinal cord3.76e-2752
neural keel3.76e-2752
neurectoderm1.20e-2664
neural plate1.20e-2664
presumptive neural plate1.20e-2664
ecto-epithelium3.71e-2273
brain1.08e-2147
future brain1.08e-2147
gray matter1.77e-2134
regional part of brain1.84e-2046
pre-chordal neural plate1.58e-1749
occipital lobe3.49e-1710
visual cortex3.49e-1710
neocortex3.49e-1710
anterior neural tube3.44e-1640
brain grey matter3.70e-1629
regional part of telencephalon3.70e-1629
telencephalon3.70e-1629
structure with developmental contribution from neural crest1.36e-1592
regional part of forebrain5.04e-1539
forebrain5.04e-1539
future forebrain5.04e-1539
regional part of cerebral cortex4.27e-1317
posterior neural tube2.09e-1212
chordal neural plate2.09e-1212
cerebral cortex5.72e-1221
cerebral hemisphere5.72e-1221
pallium5.72e-1221
tube4.16e-09114
anatomical conduit1.20e-08122
spinal cord1.66e-086
dorsal region element1.66e-086
dorsum1.66e-086
regional part of midbrain7.17e-084
midbrain7.17e-084
presumptive midbrain7.17e-084
midbrain neural tube7.17e-084
organ system subdivision1.79e-07194
regional part of spinal cord5.43e-075
gray matter of spinal cord5.43e-075
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