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FFCP PHASE1:Mm9::chr14:28435572..28435598,+: Difference between revisions

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(Created page with "{{FFCP |id=chr14:28435572..28435598,+ |short_description=p3@Erc2 |description=CAGE_peak_3_at_Erc2_5end |association_with_transcript=-15bp_to_ENSMUST00000090302,ENSMUST0000...")
 
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{{FFCP
{{FFCP
|id=chr14:28435572..28435598,+
|DHSsupport=NA
|short_description=p3@Erc2
|DPIdataset=NA
|description=CAGE_peak_3_at_Erc2_5end
|association_with_transcript=-15bp_to_ENSMUST00000090302,ENSMUST00000100776,ENSMUST00000112283_5end
|EntrezGene=238988
|EntrezGene=238988
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q6PH08,F8WHE9,Q3UHT7
|UniProt=Q6PH08,F8WHE9,Q3UHT7
|association_with_transcript=-15bp_to_ENSMUST00000090302,ENSMUST00000100776,ENSMUST00000112283_5end
|cluster_id=chr14:28435572..28435598,+
|description=CAGE_peak_3_at_Erc2_5end
|id=chr14:28435572..28435598,+
|ontology_enrichment_celltype=CL:0000540!1.46e-14!33;CL:0000047!1.46e-14!33;CL:0000031!1.46e-14!33;CL:0000404!1.46e-14!33;CL:0000117!3.15e-14!23;CL:0000337!3.15e-14!23;CL:0002319!3.50e-13!43;CL:0000221!4.84e-13!44;CL:0000133!4.84e-13!44;CL:0000393!3.62e-11!39;CL:0000211!3.62e-11!39;CL:0000055!5.09e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.93e-27,23;CL:0000337,7.93e-27,23;CL:0000540,2.87e-18,33;CL:0000047,2.87e-18,33;CL:0000031,2.87e-18,33;CL:0000404,2.87e-18,33;CL:0000393,1.97e-14,39;CL:0000211,1.97e-14,39;CL:0002319,9.34e-14,43;CL:0000221,2.73e-13,44;CL:0000133,2.73e-13,44;CL:0002609,1.77e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.08e-28!73;UBERON:0005743!1.08e-28!73;UBERON:0000073!1.73e-28!75;UBERON:0001016!1.73e-28!75;UBERON:0002346!8.45e-27!71;UBERON:0003075!8.45e-27!71;UBERON:0007284!8.45e-27!71;UBERON:0004121!1.05e-24!102;UBERON:0000924!1.05e-24!102;UBERON:0006601!1.05e-24!102;UBERON:0001049!2.08e-24!52;UBERON:0005068!2.08e-24!52;UBERON:0006241!2.08e-24!52;UBERON:0007135!2.08e-24!52;UBERON:0000033!4.15e-23!63;UBERON:0003056!6.26e-22!49;UBERON:0000955!3.07e-21!50;UBERON:0006238!3.07e-21!50;UBERON:0002020!6.98e-21!34;UBERON:0002616!1.60e-20!49;UBERON:0003080!4.09e-19!40;UBERON:0002780!1.53e-18!39;UBERON:0001890!1.53e-18!39;UBERON:0006240!1.53e-18!39;UBERON:0002791!3.27e-17!29;UBERON:0003528!3.27e-17!29;UBERON:0001893!3.27e-17!29;UBERON:0000956!1.38e-12!21;UBERON:0001869!1.38e-12!21;UBERON:0000203!1.38e-12!21;UBERON:0007811!3.50e-10!86;UBERON:0002619!5.24e-10!17;UBERON:0000153!9.84e-10!94;UBERON:0002021!5.58e-07!10;UBERON:0000411!5.58e-07!10;UBERON:0001950!5.58e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.31e-31,34;UBERON:0001017,5.13e-30,73;UBERON:0000073,7.58e-30,54;UBERON:0001049,3.15e-29,52;UBERON:0005068,3.15e-29,52;UBERON:0006241,3.15e-29,52;UBERON:0007135,3.15e-29,52;UBERON:0001016,6.96e-29,75;UBERON:0002346,1.97e-27,64;UBERON:0003075,1.97e-27,64;UBERON:0007284,1.97e-27,64;UBERON:0004121,7.09e-25,95;UBERON:0000924,7.09e-25,95;UBERON:0006601,7.09e-25,95;UBERON:0003528,1.57e-24,29;UBERON:0002791,1.57e-24,29;UBERON:0001893,1.57e-24,29;UBERON:0000955,5.33e-23,47;UBERON:0006238,5.33e-23,47;UBERON:0003080,1.16e-22,40;UBERON:0010371,1.20e-22,73;UBERON:0003056,1.31e-22,49;UBERON:0002616,8.76e-22,46;UBERON:0002780,1.26e-21,39;UBERON:0001890,1.26e-21,39;UBERON:0006240,1.26e-21,39;UBERON:0000956,2.03e-18,21;UBERON:0001869,2.03e-18,21;UBERON:0000203,2.03e-18,21;UBERON:0010314,1.13e-15,92;UBERON:0002619,1.89e-13,17;UBERON:0002240,2.09e-09,6;UBERON:0005174,2.09e-09,6;UBERON:0001137,2.09e-09,6;UBERON:0000025,2.34e-09,114;UBERON:0002021,4.79e-09,10;UBERON:0000411,4.79e-09,10;UBERON:0001950,4.79e-09,10;UBERON:0001948,1.91e-08,5;UBERON:0002315,1.91e-08,5;UBERON:0004111,4.21e-08,122;UBERON:0002420,3.26e-07,8;UBERON:0007245,3.26e-07,8;UBERON:0010009,3.26e-07,8;UBERON:0010011,3.26e-07,8;UBERON:0000454,3.26e-07,8;UBERON:0003076,5.34e-07,12;UBERON:0003057,5.34e-07,12
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,5.26022798234954,3.70293685490423,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,4.56234294157302,4.3201900266141,1.68259969081106,2.57085885963423,2.42955395046775,2.9397791811589,3.92966431174769,3.67687514644008,0,3.31987079021488,1.99688493233117,3.95658863190582,6.03818447775904,7.29278718779464,0.279182999001381,1.68828783009504,2.75036845998258,4.71405736757868,5.83723891276322,5.59198337475902,0.075726193333184,0.226714680320357,0,0,1.3599426674155,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.64769703345305,0.915001205637253,7.91622418311046,2.43354048269187,4.85859368927628,2.28566849015516,2.43361894601636,0.101839363850316,0,0,1.05220927943237,0.130120442962704,0.919608417733892,0.360124259610698,0.753524089178575,1.02054748726992,0.768682321709099,1.3118241438362,1.29351685369508,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0.414251545071004,0,0,0,0.393528463494808,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,3.78521907415429,5.65975368086064,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.569003702859245,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.505892296994058,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,2.87536413054709,0,0.312037673114561,0.252578877947112,0.717589654087649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.52375192569864,0.163934945376675,0,0.631016438832513,0.780877488593277,0.430846795465598,0,0.222798674082394,1.13230612315533,0.809621403349789,0.292255857911312,0.790575555893047,3.53453448063988,0,0,0,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,1.70219802876894,0.540183282093931,0.258717367565509,0.428674070063185,0.709360934569094,0.178368817602071,0.493647061806363,0,0,0.21183207086382,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,3.3885110557024,2.30162618253588,8.02053718815155,6.01486138202907,2.74033007908257,0.755393897389701,0.675022500231806,2.2516060161211,1.35942722695261,3.10656187051092,0.31136204275253,0.399024873401031,0.682934423016537,0.486213434136588,0.838452650511929,0.367687016900028,0.44449345560323,0.824140228955577,0.962757628775446,0,1.01391719956096,1.13175804831646,0.468207537349412,1.28050304809739,1.32101578597911,1.90517476513229,1.15884325944855,1.35036454324594,1.23625770240992,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,1.0174249164263,0.658765662907314,0.846146078916765,0.73171189149109,0.789209134313529,0.543216455383447,2.24456908663095,1.06771516311757,1.0835493061312,1.63692417267876,0.929621047115796,0.578719832943424,0.999242311751784,0.935726433781634,0.859484216193193,0.191288332068843,0.220591419119515,0
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,5.26022798234954,3.70293685490423,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,4.56234294157302,4.3201900266141,1.68259969081106,2.57085885963423,2.42955395046775,2.9397791811589,3.92966431174769,3.67687514644008,0,3.31987079021488,1.99688493233117,3.95658863190582,6.03818447775904,7.29278718779464,0.279182999001381,1.68828783009504,2.75036845998258,4.71405736757868,5.83723891276322,5.59198337475902,0.075726193333184,0.226714680320357,0,0,1.3599426674155,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.64769703345305,0.915001205637253,7.91622418311046,2.43354048269187,4.85859368927628,2.28566849015516,2.43361894601636,0.101839363850316,0,0,1.05220927943237,0.130120442962704,0.919608417733892,0.360124259610698,0.753524089178575,1.02054748726992,0.768682321709099,1.3118241438362,1.29351685369508,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0.414251545071004,0,0,0,0.393528463494808,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,3.78521907415429,5.65975368086064,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.569003702859245,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.505892296994058,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,2.87536413054709,0,0.312037673114561,0.252578877947112,0.717589654087649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.52375192569864,0.163934945376675,0,0.631016438832513,0.780877488593277,0.430846795465598,0,0.222798674082394,1.13230612315533,0.809621403349789,0.292255857911312,0.790575555893047,3.53453448063988,0,0,0,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,1.70219802876894,0.540183282093931,0.258717367565509,0.428674070063185,0.709360934569094,0.178368817602071,0.493647061806363,0,0,0.21183207086382,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,3.3885110557024,2.30162618253588,8.02053718815155,6.01486138202907,2.74033007908257,0.755393897389701,0.675022500231806,2.2516060161211,1.35942722695261,3.10656187051092,0.31136204275253,0.399024873401031,0.682934423016537,0.486213434136588,0.838452650511929,0.367687016900028,0.44449345560323,0.824140228955577,0.962757628775446,0,1.01391719956096,1.13175804831646,0.468207537349412,1.28050304809739,1.32101578597911,1.90517476513229,1.15884325944855,1.35036454324594,1.23625770240992,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,1.0174249164263,0.658765662907314,0.846146078916765,0.73171189149109,0.789209134313529,0.543216455383447,2.24456908663095,1.06771516311757,1.0835493061312,1.63692417267876,0.929621047115796,0.578719832943424,0.999242311751784,0.935726433781634,0.859484216193193,0.191288332068843,0.220591419119515,0
|short_description=p3@Erc2
}}
}}

Latest revision as of 20:22, 25 September 2015

Short description:p3@Erc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Erc2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -15bp_to_ENSMUST00000090302, ENSMUST00000100776, ENSMUST00000112283_5end
EntrezGene:Erc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Erc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter1.31e-3134
central nervous system5.13e-3073
regional part of nervous system7.58e-3054
neural tube3.15e-2952
neural rod3.15e-2952
future spinal cord3.15e-2952
neural keel3.15e-2952
nervous system6.96e-2975
neurectoderm1.97e-2764
neural plate1.97e-2764
presumptive neural plate1.97e-2764
ectoderm-derived structure7.09e-2595
ectoderm7.09e-2595
presumptive ectoderm7.09e-2595
brain grey matter1.57e-2429
regional part of telencephalon1.57e-2429
telencephalon1.57e-2429
brain5.33e-2347
future brain5.33e-2347
anterior neural tube1.16e-2240
ecto-epithelium1.20e-2273
pre-chordal neural plate1.31e-2249
regional part of brain8.76e-2246
regional part of forebrain1.26e-2139
forebrain1.26e-2139
future forebrain1.26e-2139
cerebral cortex2.03e-1821
cerebral hemisphere2.03e-1821
pallium2.03e-1821
structure with developmental contribution from neural crest1.13e-1592
regional part of cerebral cortex1.89e-1317
spinal cord2.09e-096
dorsal region element2.09e-096
dorsum2.09e-096
tube2.34e-09114
occipital lobe4.79e-0910
visual cortex4.79e-0910
neocortex4.79e-0910
regional part of spinal cord1.91e-085
gray matter of spinal cord1.91e-085
anatomical conduit4.21e-08122
basal ganglion3.26e-078
nuclear complex of neuraxis3.26e-078
aggregate regional part of brain3.26e-078
collection of basal ganglia3.26e-078
cerebral subcortex3.26e-078
posterior neural tube5.34e-0712
chordal neural plate5.34e-0712
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