FFCP PHASE1:Mm9::chr5:22939909..22939948,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=69188|HGNC=|MCL_coexpression_id=7|UniProt=Q3UG20|association_with_transcript=-298bp_to_NM_026984,uc008wpz.2,uc008wqa.2_5end|description=CAGE_peak_6_at_Mll5_5end|id=chr5:22939909..22939948,+|ontology_enrichment_celltype=CL:0000540!1.60e-10!33;CL:0000047!1.60e-10!33;CL:0000031!1.60e-10!33;CL:0000404!1.60e-10!33;CL:0000393!3.17e-10!39;CL:0000211!3.17e-10!39;CL:0000034!1.20e-07!97;CL:0000838!3.54e-07!12;CL:0000542!5.36e-07!13;CL:0000051!5.36e-07!13;CL:0000723!6.48e-07!91;CL:0000048!6.48e-07!91;CL:0000117!9.63e-07!23;CL:0000337!9.63e-07!23|ontology_enrichment_celltype_v019_2=CL:0000034,1.73e-09,97;CL:0000838,2.95e-09,12;CL:0000540,4.67e-09,33;CL:0000047,4.67e-09,33;CL:0000031,4.67e-09,33;CL:0000404,4.67e-09,33;CL:0000791,1.95e-08,9;CL:0000789,1.95e-08,9;CL:0002420,1.95e-08,9;CL:0002419,1.95e-08,9;CL:0000790,1.95e-08,9;CL:0000542,2.21e-08,13;CL:0000051,2.21e-08,13;CL:0000084,3.24e-08,11;CL:0000827,3.24e-08,11;CL:0000723,7.08e-08,91;CL:0000048,7.08e-08,91;CL:0000624,2.53e-07,8;CL:0000893,2.54e-07,6;CL:0002489,2.54e-07,6;CL:0000898,2.54e-07,6;CL:0000809,2.54e-07,6;CL:0000810,2.54e-07,6;CL:0000895,2.54e-07,6;CL:0000808,2.54e-07,6;CL:0000894,2.54e-07,6;CL:0000806,2.54e-07,6;CL:0000807,2.54e-07,6;CL:0000805,2.54e-07,6;CL:0002425,2.54e-07,6;CL:0002436,2.54e-07,6;CL:0002427,2.54e-07,6;CL:0002428,2.54e-07,6;CL:0002429,2.54e-07,6;CL:0002433,2.54e-07,6;CL:0002431,2.54e-07,6;CL:0002432,2.54e-07,6;CL:0000393,5.39e-07,39;CL:0000211,5.39e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!4.82e-10!86;UBERON:0001017!1.49e-08!73;UBERON:0005743!1.49e-08!73;UBERON:0000073!2.83e-08!75;UBERON:0001016!2.83e-08!75;UBERON:0000153!4.24e-08!94;UBERON:0004121!5.13e-08!102;UBERON:0000924!5.13e-08!102;UBERON:0006601!5.13e-08!102;UBERON:0002346!2.85e-07!71;UBERON:0003075!2.85e-07!71;UBERON:0007284!2.85e-07!71;UBERON:0002370!8.49e-07!23;UBERON:0000974!8.49e-07!23;UBERON:0004807!8.49e-07!23;UBERON:0005058!8.49e-07!23;UBERON:0003351!8.49e-07!23;UBERON:0009113!8.49e-07!23;UBERON:0003295!8.49e-07!23;UBERON:0009722!8.49e-07!23;UBERON:0005562!8.49e-07!23;UBERON:0007690!8.49e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.68e-07,23;UBERON:0000974,1.68e-07,23;UBERON:0004807,1.68e-07,23;UBERON:0005058,1.68e-07,23;UBERON:0003351,1.68e-07,23;UBERON:0009113,1.68e-07,23;UBERON:0003295,1.68e-07,23;UBERON:0009722,1.68e-07,23;UBERON:0005562,1.68e-07,23;UBERON:0007690,1.68e-07,23;UBERON:0006562,4.61e-07,24;UBERON:0003408,4.61e-07,24;UBERON:0001557,4.61e-07,24;UBERON:0001042,4.61e-07,24;UBERON:0008814,4.61e-07,24;UBERON:0009145,4.61e-07,24;UBERON:0007811,7.83e-07,36;UBERON:0001017,8.71e-07,73|phase1_expression=0.80074423552397,0.697950815278722,0.454999239389536,0,0,0,0,1.93684985162364,45.8971234214434,46.5788407380767,3.93801326918661,2.39316476986009,1.71200729931206,0.961624426608971,0.333109761815663,0,0,0.315462165358238,0.548457734422955,0.42438965179803,0.340173160604279,0.794327609607082,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0.837063261473815,0.7813353445238,0,1.17646297606203,2.04913645487534,1.45653105909346,0.755380907853464,0.405507724878058,0.183546752161682,0,0,0,0,0.139986421625363,0,1.51004345451963,0.725362142011344,1.68046899571232,0.257259436035947,0.573066879877513,0.515672092277442,1.21389876515759,3.1739458756322,1.90149421051854,0,0.889294796111139,0,0,0,0,0.384218305321555,0.518448061542388,0.405017814995072,1.89292465216244,0.856952953211411,0.662605622854841,0.979926393719632,1.15014565221884,0.919218786610021,1.10115880999389,0,0.46081959976873,2.1101806036831,1.18933936683133,2.08365348222704,0,0.56276261003168,0.916789486660861,2.35702868378934,0.996601765593721,2.05039390407831,0.227178579999552,0.226714680320357,0.869593466105033,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,0,0,0,0,1.29468941823586,0.29688427812965,0.520455980298408,0.608930956624282,0,0.301445281105245,0.587943535678524,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0.510914110417183,2.03685711660064,1.19980546198682,1.77898317902291,0.449371918214468,0,1.25654352112864,0.521472960576829,0.511430914660661,0.20778804455956,0.486723789203273,0.203678727700633,0.248813941220186,0,0.210441855886474,0.780722657776222,1.14951052216736,0.360124259610698,0.90422890701429,1.36072998302656,1.15302348256365,0.843315521037559,1.03481348295606,0,0.189106080167819,0,0,0,0.348252166522167,0,0,2.1066395619397,1.02939162845886,0.284163499395593,0.828503090142008,0,0.540186184383045,0,0.590292695242212,0.308534225774757,0,0,0.233530684734339,0.329119699826961,0.656669856316381,0.243206428637567,0,0.439100230582101,0.134206418760372,1.26173969138476,2.36680608472354,0.330418782983798,0,0.426576501070468,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.49095073923223,0.252946148497029,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,0.586058432961016,0.163934945376675,0.252470927204373,0.315508219416257,0.780877488593277,2.15423397732799,2.15071918157297,0.891194696329576,1.41538265394416,2.83367491172426,2.04579100537918,1.58115111178609,2.24924921495265,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,1.26042765821917,0.646793418913773,0.857348140126369,1.06404140185364,1.24858172321449,0.493647061806363,0.608929898229199,0.469343416127421,0,0,0.16488625294148,0.484393280087717,0.120625849856312,0.238744688006273,0.164140899745061,0,0.927126510052548,0.512612642393558,0.412773735926445,0,0,0.27338845544205,0.686334519619568,2.88963330989554,3.49878630809145,4.00779924032829,0,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.506868376472335,0.352071715937262,0.2604087696879,0.419437377702843,0.241584120826006,0.288030006257865,2.52808896502543,0.202725215290164,0.410843828659309,0.51968329191118,0.716106782669926,1.98681354781265,0.841368146639782,0.295379054349154,1.21159739937777,0.990688486514998,0.806609481094724,1.16949456887703,1.44317762460494,2.45441494581295,0,0.221985953374065,0.269141569828427,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0.564751842617067,0.920650473014354,1.14579102687879,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,1.55328093525546,0.726511433089237,1.99512436700516,1.36586884603307,0.729320151204882,0.838452650511929,0.919217542250071,0.44449345560323,0.824140228955577,1.28367683836726,0.758091635291392,1.52087579934144,0.377252682772152,0.187283014939765,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,1.23625770240992,0.294397840268795,1.02860775715625,0.177475806159338,0.715308569841963,0.290692833264657,0.564656282491984,0.338458431566706,0.365855945745545,0,0.543216455383447,0,0.474540072496697,0.492522411877817,0.409231043169689,0.154936841185966,0.771626443924566,0.499621155875892,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421|short_description=p6@Mll5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69188 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UG20 | |||
|association_with_transcript=-298bp_to_NM_026984,uc008wpz.2,uc008wqa.2_5end | |||
|cluster_id=chr5:22939909..22939948,+ | |||
|description=CAGE_peak_6_at_Mll5_5end | |||
|id=chr5:22939909..22939948,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.60e-10!33;CL:0000047!1.60e-10!33;CL:0000031!1.60e-10!33;CL:0000404!1.60e-10!33;CL:0000393!3.17e-10!39;CL:0000211!3.17e-10!39;CL:0000034!1.20e-07!97;CL:0000838!3.54e-07!12;CL:0000542!5.36e-07!13;CL:0000051!5.36e-07!13;CL:0000723!6.48e-07!91;CL:0000048!6.48e-07!91;CL:0000117!9.63e-07!23;CL:0000337!9.63e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.73e-09,97;CL:0000838,2.95e-09,12;CL:0000540,4.67e-09,33;CL:0000047,4.67e-09,33;CL:0000031,4.67e-09,33;CL:0000404,4.67e-09,33;CL:0000791,1.95e-08,9;CL:0000789,1.95e-08,9;CL:0002420,1.95e-08,9;CL:0002419,1.95e-08,9;CL:0000790,1.95e-08,9;CL:0000542,2.21e-08,13;CL:0000051,2.21e-08,13;CL:0000084,3.24e-08,11;CL:0000827,3.24e-08,11;CL:0000723,7.08e-08,91;CL:0000048,7.08e-08,91;CL:0000624,2.53e-07,8;CL:0000893,2.54e-07,6;CL:0002489,2.54e-07,6;CL:0000898,2.54e-07,6;CL:0000809,2.54e-07,6;CL:0000810,2.54e-07,6;CL:0000895,2.54e-07,6;CL:0000808,2.54e-07,6;CL:0000894,2.54e-07,6;CL:0000806,2.54e-07,6;CL:0000807,2.54e-07,6;CL:0000805,2.54e-07,6;CL:0002425,2.54e-07,6;CL:0002436,2.54e-07,6;CL:0002427,2.54e-07,6;CL:0002428,2.54e-07,6;CL:0002429,2.54e-07,6;CL:0002433,2.54e-07,6;CL:0002431,2.54e-07,6;CL:0002432,2.54e-07,6;CL:0000393,5.39e-07,39;CL:0000211,5.39e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.82e-10!86;UBERON:0001017!1.49e-08!73;UBERON:0005743!1.49e-08!73;UBERON:0000073!2.83e-08!75;UBERON:0001016!2.83e-08!75;UBERON:0000153!4.24e-08!94;UBERON:0004121!5.13e-08!102;UBERON:0000924!5.13e-08!102;UBERON:0006601!5.13e-08!102;UBERON:0002346!2.85e-07!71;UBERON:0003075!2.85e-07!71;UBERON:0007284!2.85e-07!71;UBERON:0002370!8.49e-07!23;UBERON:0000974!8.49e-07!23;UBERON:0004807!8.49e-07!23;UBERON:0005058!8.49e-07!23;UBERON:0003351!8.49e-07!23;UBERON:0009113!8.49e-07!23;UBERON:0003295!8.49e-07!23;UBERON:0009722!8.49e-07!23;UBERON:0005562!8.49e-07!23;UBERON:0007690!8.49e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.68e-07,23;UBERON:0000974,1.68e-07,23;UBERON:0004807,1.68e-07,23;UBERON:0005058,1.68e-07,23;UBERON:0003351,1.68e-07,23;UBERON:0009113,1.68e-07,23;UBERON:0003295,1.68e-07,23;UBERON:0009722,1.68e-07,23;UBERON:0005562,1.68e-07,23;UBERON:0007690,1.68e-07,23;UBERON:0006562,4.61e-07,24;UBERON:0003408,4.61e-07,24;UBERON:0001557,4.61e-07,24;UBERON:0001042,4.61e-07,24;UBERON:0008814,4.61e-07,24;UBERON:0009145,4.61e-07,24;UBERON:0007811,7.83e-07,36;UBERON:0001017,8.71e-07,73 | |||
|phase1_expression=0.80074423552397,0.697950815278722,0.454999239389536,0,0,0,0,1.93684985162364,45.8971234214434,46.5788407380767,3.93801326918661,2.39316476986009,1.71200729931206,0.961624426608971,0.333109761815663,0,0,0.315462165358238,0.548457734422955,0.42438965179803,0.340173160604279,0.794327609607082,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0.837063261473815,0.7813353445238,0,1.17646297606203,2.04913645487534,1.45653105909346,0.755380907853464,0.405507724878058,0.183546752161682,0,0,0,0,0.139986421625363,0,1.51004345451963,0.725362142011344,1.68046899571232,0.257259436035947,0.573066879877513,0.515672092277442,1.21389876515759,3.1739458756322,1.90149421051854,0,0.889294796111139,0,0,0,0,0.384218305321555,0.518448061542388,0.405017814995072,1.89292465216244,0.856952953211411,0.662605622854841,0.979926393719632,1.15014565221884,0.919218786610021,1.10115880999389,0,0.46081959976873,2.1101806036831,1.18933936683133,2.08365348222704,0,0.56276261003168,0.916789486660861,2.35702868378934,0.996601765593721,2.05039390407831,0.227178579999552,0.226714680320357,0.869593466105033,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,0,0,0,0,1.29468941823586,0.29688427812965,0.520455980298408,0.608930956624282,0,0.301445281105245,0.587943535678524,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0.510914110417183,2.03685711660064,1.19980546198682,1.77898317902291,0.449371918214468,0,1.25654352112864,0.521472960576829,0.511430914660661,0.20778804455956,0.486723789203273,0.203678727700633,0.248813941220186,0,0.210441855886474,0.780722657776222,1.14951052216736,0.360124259610698,0.90422890701429,1.36072998302656,1.15302348256365,0.843315521037559,1.03481348295606,0,0.189106080167819,0,0,0,0.348252166522167,0,0,2.1066395619397,1.02939162845886,0.284163499395593,0.828503090142008,0,0.540186184383045,0,0.590292695242212,0.308534225774757,0,0,0.233530684734339,0.329119699826961,0.656669856316381,0.243206428637567,0,0.439100230582101,0.134206418760372,1.26173969138476,2.36680608472354,0.330418782983798,0,0.426576501070468,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.49095073923223,0.252946148497029,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,0.586058432961016,0.163934945376675,0.252470927204373,0.315508219416257,0.780877488593277,2.15423397732799,2.15071918157297,0.891194696329576,1.41538265394416,2.83367491172426,2.04579100537918,1.58115111178609,2.24924921495265,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,1.26042765821917,0.646793418913773,0.857348140126369,1.06404140185364,1.24858172321449,0.493647061806363,0.608929898229199,0.469343416127421,0,0,0.16488625294148,0.484393280087717,0.120625849856312,0.238744688006273,0.164140899745061,0,0.927126510052548,0.512612642393558,0.412773735926445,0,0,0.27338845544205,0.686334519619568,2.88963330989554,3.49878630809145,4.00779924032829,0,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.506868376472335,0.352071715937262,0.2604087696879,0.419437377702843,0.241584120826006,0.288030006257865,2.52808896502543,0.202725215290164,0.410843828659309,0.51968329191118,0.716106782669926,1.98681354781265,0.841368146639782,0.295379054349154,1.21159739937777,0.990688486514998,0.806609481094724,1.16949456887703,1.44317762460494,2.45441494581295,0,0.221985953374065,0.269141569828427,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0.564751842617067,0.920650473014354,1.14579102687879,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,1.55328093525546,0.726511433089237,1.99512436700516,1.36586884603307,0.729320151204882,0.838452650511929,0.919217542250071,0.44449345560323,0.824140228955577,1.28367683836726,0.758091635291392,1.52087579934144,0.377252682772152,0.187283014939765,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,1.23625770240992,0.294397840268795,1.02860775715625,0.177475806159338,0.715308569841963,0.290692833264657,0.564656282491984,0.338458431566706,0.365855945745545,0,0.543216455383447,0,0.474540072496697,0.492522411877817,0.409231043169689,0.154936841185966,0.771626443924566,0.499621155875892,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421 | |||
|short_description=p6@Mll5 | |||
}} |
Latest revision as of 20:16, 25 September 2015
Short description: | p6@Mll5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Mll5_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -298bp_to_NM_026984, uc008wpz.2, uc008wqa.2_5end |
EntrezGene: | Mll5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.68e-07 | 23 |
neck | 1.68e-07 | 23 |
respiratory system epithelium | 1.68e-07 | 23 |
hemolymphoid system gland | 1.68e-07 | 23 |
pharyngeal epithelium | 1.68e-07 | 23 |
thymic region | 1.68e-07 | 23 |
pharyngeal gland | 1.68e-07 | 23 |
entire pharyngeal arch endoderm | 1.68e-07 | 23 |
thymus primordium | 1.68e-07 | 23 |
early pharyngeal endoderm | 1.68e-07 | 23 |
pharynx | 4.61e-07 | 24 |
gland of gut | 4.61e-07 | 24 |
upper respiratory tract | 4.61e-07 | 24 |
chordate pharynx | 4.61e-07 | 24 |
pharyngeal arch system | 4.61e-07 | 24 |
pharyngeal region of foregut | 4.61e-07 | 24 |
craniocervical region | 7.83e-07 | 36 |
central nervous system | 8.71e-07 | 73 |