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FFCP PHASE1:Mm9::chr3:88425196..88425207,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16800
|EntrezGene=16800
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q60875
|UniProt=Q60875
|association_with_transcript=-108bp_to_NM_001198912,NM_001198913,uc008pvy.2,uc008pvz.2_5end
|association_with_transcript=-108bp_to_NM_001198912,NM_001198913,uc008pvy.2,uc008pvz.2_5end
|cluster_id=chr3:88425196..88425207,+
|description=CAGE_peak_8_at_Arhgef2_5end
|description=CAGE_peak_8_at_Arhgef2_5end
|id=chr3:88425196..88425207,+
|id=chr3:88425196..88425207,+
|ontology_enrichment_celltype=CL:0000117!2.19e-11!23;CL:0000337!2.19e-11!23;CL:0000540!1.11e-10!33;CL:0000047!1.11e-10!33;CL:0000031!1.11e-10!33;CL:0000404!1.11e-10!33;CL:0002319!2.59e-10!43;CL:0000221!1.27e-09!44;CL:0000133!1.27e-09!44;CL:0000393!3.72e-08!39;CL:0000211!3.72e-08!39;CL:0000055!1.08e-07!50
|ontology_enrichment_celltype=CL:0000117!2.19e-11!23;CL:0000337!2.19e-11!23;CL:0000540!1.11e-10!33;CL:0000047!1.11e-10!33;CL:0000031!1.11e-10!33;CL:0000404!1.11e-10!33;CL:0002319!2.59e-10!43;CL:0000221!1.27e-09!44;CL:0000133!1.27e-09!44;CL:0000393!3.72e-08!39;CL:0000211!3.72e-08!39;CL:0000055!1.08e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,6.90e-17,23;CL:0000337,6.90e-17,23;CL:0000540,1.69e-11,33;CL:0000047,1.69e-11,33;CL:0000031,1.69e-11,33;CL:0000404,1.69e-11,33;CL:0002319,6.01e-10,43;CL:0000221,1.35e-09,44;CL:0000133,1.35e-09,44;CL:0000393,5.88e-09,39;CL:0000211,5.88e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.20e-14!73;UBERON:0005743!3.20e-14!73;UBERON:0000073!7.71e-14!75;UBERON:0001016!7.71e-14!75;UBERON:0002346!3.21e-12!71;UBERON:0003075!3.21e-12!71;UBERON:0007284!3.21e-12!71;UBERON:0004121!3.51e-12!102;UBERON:0000924!3.51e-12!102;UBERON:0006601!3.51e-12!102;UBERON:0000033!1.76e-10!63;UBERON:0003056!2.12e-09!49;UBERON:0001049!3.21e-09!52;UBERON:0005068!3.21e-09!52;UBERON:0006241!3.21e-09!52;UBERON:0007135!3.21e-09!52;UBERON:0000955!9.22e-09!50;UBERON:0006238!9.22e-09!50;UBERON:0002616!2.60e-08!49
|ontology_enrichment_uberon=UBERON:0001017!3.20e-14!73;UBERON:0005743!3.20e-14!73;UBERON:0000073!7.71e-14!75;UBERON:0001016!7.71e-14!75;UBERON:0002346!3.21e-12!71;UBERON:0003075!3.21e-12!71;UBERON:0007284!3.21e-12!71;UBERON:0004121!3.51e-12!102;UBERON:0000924!3.51e-12!102;UBERON:0006601!3.51e-12!102;UBERON:0000033!1.76e-10!63;UBERON:0003056!2.12e-09!49;UBERON:0001049!3.21e-09!52;UBERON:0005068!3.21e-09!52;UBERON:0006241!3.21e-09!52;UBERON:0007135!3.21e-09!52;UBERON:0000955!9.22e-09!50;UBERON:0006238!9.22e-09!50;UBERON:0002616!2.60e-08!49
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.32e-13,95;UBERON:0000924,3.32e-13,95;UBERON:0006601,3.32e-13,95;UBERON:0002346,1.65e-11,64;UBERON:0003075,1.65e-11,64;UBERON:0007284,1.65e-11,64;UBERON:0001017,2.58e-11,73;UBERON:0001016,8.56e-11,75;UBERON:0010371,3.68e-09,73;UBERON:0000970,3.07e-08,9;UBERON:0000019,3.07e-08,9;UBERON:0000047,3.07e-08,9;UBERON:0010312,3.07e-08,9;UBERON:0004088,3.07e-08,9;UBERON:0002104,3.07e-08,9;UBERON:0001456,3.07e-08,9;UBERON:0003072,3.07e-08,9;UBERON:0004128,3.07e-08,9;UBERON:0003071,3.07e-08,9;UBERON:0000073,4.16e-08,54;UBERON:0003076,3.94e-07,12;UBERON:0003057,3.94e-07,12
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0.129123323441576,0.563154888606667,0.70219357896598,0,0,0,0,0,0,0,0.315462165358238,0,0.42438965179803,0.510259740906419,0.794327609607082,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0.659058548203415,0.777719596297134,0.139986421625363,1.43752564364972,0.503347818173209,0,0,0.257259436035947,0.573066879877513,0,1.82084814773638,4.23192783417626,2.53532561402472,0.338844532069132,2.66788438833342,1.3498495759221,0,0,0.599200221036809,1.92109152660777,1.97010263386108,1.35005938331691,0.841299845405528,1.71390590642282,1.76694832761291,0.979926393719632,1.15014565221884,0.919218786610021,2.20231761998777,2.29837208553338,1.84327839907492,3.03338461779446,2.28719109006024,3.64639359389732,0.837548997004143,0,1.22238598221448,0.589257170947335,1.42371680799103,1.86399445825301,0,0.755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0.760079596425296,1.01104889002957,0.34255163915718,0,0.148442139064825,0.867426633830679,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0.647067399789637,0.662524555381181,0,0,1.75668478206928,1.8850203613211,0,1.1981512450592,1.79970819298022,0.762421362438388,1.19832511523858,0.915001205637253,1.50785222535437,0.173824320192276,1.02286182932132,1.0389402227978,1.1356888414743,0.81471491080253,0,1.0108910337347,0.841767423545896,0.390361328888111,1.14951052216736,2.16074555766419,1.20563854268572,2.58538696775046,1.92170580427275,2.52994656311268,4.13925393182425,1.29340795759705,0.945530400839096,0.351902248327898,0.43839146485515,0.278047249225598,0,0,0.59710280045548,0.702213187313235,1.02939162845886,1.70498099637356,0.414251545071004,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0.697601834251224,0,0.467061369468678,0.493679549740441,0.32833492815819,0,0.146199987425332,0.439100230582101,0.536825675041487,0.210289948564127,0.823236899034275,0,0,0.213288250535234,1.39342003116263,0,0,0.22237804384487,0,0,0,0,0.397912944082302,0,0,0,0.199141273254367,1.13800740571849,0.456994050438915,1.1270773567308,0,0.581857461502877,0.420814919341911,0.189709611372772,0.147610147979602,0.31399745568275,0.370191491765402,0,0.500535317148282,0,0,0,0.482354319504834,0.50925170356284,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.162964976442026,0.848725428875941,0.469380496577004,0.167506257441816,0,0.390267295715598,0.472905432318573,1.32878813789265,0.318909537314974,0.163863314715738,0,0.289298117163023,0,1.08781136763742,0,0,0.80275294993896,1.40654023910644,0,0.252470927204373,0.631016438832513,0.780877488593277,1.07711698866399,0.716906393857656,0.891194696329576,0.849229592366497,0,0.584511715822624,0.395287777946524,1.60660658210904,0,0.35613120733451,0.651547837414304,0.164970122972535,0,0.485561272309963,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0.720244376125241,0.388076051348264,0.214337035031592,0.709360934569094,0.891844088010353,0.329098041204242,0.608929898229199,0.704015124191131,0.42366414172764,0,0.16488625294148,0.484393280087717,0.180938774784468,0.119372344003136,0,0.582961673259701,1.48340241608408,0.170870880797853,0.206386867963223,0,0,0,0.457556346413045,0.849892149969277,2.23922323717853,1.10559979043539,0.954670618015114,0.158167996790568,0.406638934253697,0.648032044930808,0,0,0,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.645799117388655,0.337912250981556,0.352071715937262,0.5208175393758,1.15345278868282,0,0,0,1.01362607645082,0.102710957164827,0,0.358053391334963,0,0.360586348559907,0,0.100966449948148,0.304827226619999,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0.717710852875806,0.167884616364078,0.386379188064381,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0.920650473014354,0,0.68741272937475,0,0,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0.830298780673413,1.99512436700516,1.02440163452481,0.486213434136588,0.838452650511929,0.551530525350042,0.44449345560323,0.412070114477788,0,0.252697211763798,1.01391719956096,0.754505365544305,0.187283014939765,0.576226371643824,0.459483751644906,0.476293691283074,0.927074607558844,0.964546102318525,0,1.17759136107518,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.564656282491984,0.423073039458382,0.548783918618318,1.05227884575137,0.950628796921032,0,0.474540072496697,0.689531376628944,0.818462086339379,0.619747364743864,0.578719832943424,0.999242311751784,0.701794825336225,1.28922632428979,2.48674831689496,0.441182838239031,0.695603506861264
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0.129123323441576,0.563154888606667,0.70219357896598,0,0,0,0,0,0,0,0.315462165358238,0,0.42438965179803,0.510259740906419,0.794327609607082,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0.659058548203415,0.777719596297134,0.139986421625363,1.43752564364972,0.503347818173209,0,0,0.257259436035947,0.573066879877513,0,1.82084814773638,4.23192783417626,2.53532561402472,0.338844532069132,2.66788438833342,1.3498495759221,0,0,0.599200221036809,1.92109152660777,1.97010263386108,1.35005938331691,0.841299845405528,1.71390590642282,1.76694832761291,0.979926393719632,1.15014565221884,0.919218786610021,2.20231761998777,2.29837208553338,1.84327839907492,3.03338461779446,2.28719109006024,3.64639359389732,0.837548997004143,0,1.22238598221448,0.589257170947335,1.42371680799103,1.86399445825301,0,0.755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0.760079596425296,1.01104889002957,0.34255163915718,0,0.148442139064825,0.867426633830679,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0.647067399789637,0.662524555381181,0,0,1.75668478206928,1.8850203613211,0,1.1981512450592,1.79970819298022,0.762421362438388,1.19832511523858,0.915001205637253,1.50785222535437,0.173824320192276,1.02286182932132,1.0389402227978,1.1356888414743,0.81471491080253,0,1.0108910337347,0.841767423545896,0.390361328888111,1.14951052216736,2.16074555766419,1.20563854268572,2.58538696775046,1.92170580427275,2.52994656311268,4.13925393182425,1.29340795759705,0.945530400839096,0.351902248327898,0.43839146485515,0.278047249225598,0,0,0.59710280045548,0.702213187313235,1.02939162845886,1.70498099637356,0.414251545071004,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0.697601834251224,0,0.467061369468678,0.493679549740441,0.32833492815819,0,0.146199987425332,0.439100230582101,0.536825675041487,0.210289948564127,0.823236899034275,0,0,0.213288250535234,1.39342003116263,0,0,0.22237804384487,0,0,0,0,0.397912944082302,0,0,0,0.199141273254367,1.13800740571849,0.456994050438915,1.1270773567308,0,0.581857461502877,0.420814919341911,0.189709611372772,0.147610147979602,0.31399745568275,0.370191491765402,0,0.500535317148282,0,0,0,0.482354319504834,0.50925170356284,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.162964976442026,0.848725428875941,0.469380496577004,0.167506257441816,0,0.390267295715598,0.472905432318573,1.32878813789265,0.318909537314974,0.163863314715738,0,0.289298117163023,0,1.08781136763742,0,0,0.80275294993896,1.40654023910644,0,0.252470927204373,0.631016438832513,0.780877488593277,1.07711698866399,0.716906393857656,0.891194696329576,0.849229592366497,0,0.584511715822624,0.395287777946524,1.60660658210904,0,0.35613120733451,0.651547837414304,0.164970122972535,0,0.485561272309963,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0.720244376125241,0.388076051348264,0.214337035031592,0.709360934569094,0.891844088010353,0.329098041204242,0.608929898229199,0.704015124191131,0.42366414172764,0,0.16488625294148,0.484393280087717,0.180938774784468,0.119372344003136,0,0.582961673259701,1.48340241608408,0.170870880797853,0.206386867963223,0,0,0,0.457556346413045,0.849892149969277,2.23922323717853,1.10559979043539,0.954670618015114,0.158167996790568,0.406638934253697,0.648032044930808,0,0,0,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.645799117388655,0.337912250981556,0.352071715937262,0.5208175393758,1.15345278868282,0,0,0,1.01362607645082,0.102710957164827,0,0.358053391334963,0,0.360586348559907,0,0.100966449948148,0.304827226619999,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0.717710852875806,0.167884616364078,0.386379188064381,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0.920650473014354,0,0.68741272937475,0,0,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0.830298780673413,1.99512436700516,1.02440163452481,0.486213434136588,0.838452650511929,0.551530525350042,0.44449345560323,0.412070114477788,0,0.252697211763798,1.01391719956096,0.754505365544305,0.187283014939765,0.576226371643824,0.459483751644906,0.476293691283074,0.927074607558844,0.964546102318525,0,1.17759136107518,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.564656282491984,0.423073039458382,0.548783918618318,1.05227884575137,0.950628796921032,0,0.474540072496697,0.689531376628944,0.818462086339379,0.619747364743864,0.578719832943424,0.999242311751784,0.701794825336225,1.28922632428979,2.48674831689496,0.441182838239031,0.695603506861264
|short_description=p8@Arhgef2
|short_description=p8@Arhgef2
}}
}}

Latest revision as of 20:03, 25 September 2015

Short description:p8@Arhgef2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Arhgef2_5end
Coexpression cluster:NA
Association with transcript: -108bp_to_NM_001198912, NM_001198913, uc008pvy.2, uc008pvz.2_5end
EntrezGene:Arhgef2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Arhgef2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.90e-1723
neuroblast (sensu Vertebrata)6.90e-1723
neuron1.69e-1133
neuronal stem cell1.69e-1133
neuroblast1.69e-1133
electrically signaling cell1.69e-1133
neural cell6.01e-1043
ectodermal cell1.35e-0944
neurectodermal cell1.35e-0944
electrically responsive cell5.88e-0939
electrically active cell5.88e-0939

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.32e-1395
ectoderm3.32e-1395
presumptive ectoderm3.32e-1395
neurectoderm1.65e-1164
neural plate1.65e-1164
presumptive neural plate1.65e-1164
central nervous system2.58e-1173
nervous system8.56e-1175
ecto-epithelium3.68e-0973
eye3.07e-089
camera-type eye3.07e-089
simple eye3.07e-089
immature eye3.07e-089
ocular region3.07e-089
visual system3.07e-089
face3.07e-089
optic cup3.07e-089
optic vesicle3.07e-089
eye primordium3.07e-089
regional part of nervous system4.16e-0854
posterior neural tube3.94e-0712
chordal neural plate3.94e-0712
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