FFCP PHASE1:Mm9::chr16:87440796..87440857,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=53858|HGNC=|UniProt=Q99M03|association_with_transcript=0bp_to_ENSMUST00000039101,ENSMUST00000152430,NM_016924,uc007zui.1_5end|description=CAGE_peak_1_at_Rwdd2b_5end|id=chr16:87440796..87440857,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000064!4.81e-10!99;UBERON:0000344!1.47e-07!15;UBERON:0001242!6.79e-07!13;UBERON:0000060!6.79e-07!13;UBERON:0001262!6.79e-07!13;UBERON:0004786!6.79e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-10,31;UBERON:0000344,1.47e-07,15;UBERON:0011216,5.77e-07,194;UBERON:0001242,6.79e-07,13;UBERON:0001262,6.79e-07,13;UBERON:0004786,6.79e-07,13|phase1_expression=4.48416771893423,8.72438519098403,9.55498402718026,13.6108895088074,11.0197060588196,7.55456723603504,6.30754129607919,4.77756296733832,4.22366166455,1.87251621057595,7.19115466547121,6.1424562426409,7.36163138704185,6.6439505838438,1.99865857089398,4.04950534779652,1.39912375625629,8.51747846467242,6.58149281307546,5.51706547337439,3.91199134694921,7.84398514486994,7.57479388502913,7.03966660290989,7.11168771308227,6.31655160526522,8.61523992318149,7.75696437669201,9.5011709728187,9.32511480111744,8.64748991555688,3.81018404075779,4.30545351309199,0,4.04392267651784,8.14549762256613,6.12508068787107,2.92972141515835,7.0320181007142,1.57057123192139,2.94115744015507,0,3.39857247121808,2.26614272356039,1.31790010585369,2.0190142737785,3.9119567217402,5.01457859675027,5.71184075109627,5.63846707315422,5.5994568650145,7.18762821824858,5.5368259999053,5.07753499407941,3.36093799142464,3.8588915405392,4.29800159908135,3.6097046459421,6.47412674750713,8.46385566835253,4.43681982454325,4.06613438482959,1.77858959222228,5.39939830368839,2.96659908770092,2.1314403448383,3.29560121570245,2.30530983192933,2.59224030771194,4.3201900266141,3.99617426567626,7.42692559449889,8.39300455616131,4.65465037016825,5.75072826109418,6.43453150627015,5.50579404996943,4.46905683298157,6.60508093001847,5.27545150920775,6.40413505216868,6.25096044668112,5.02529398202486,3.37657566019008,5.50073691996516,5.30331453852602,6.97621235915604,6.52398060388552,4.01348824665875,5.66786700800891,2.31891590961342,3.44169550792555,4.75979933595425,5.39703191637817,4.54843492213368,6.2723764193627,3.23022166303029,4.77204903218562,4.41636207824877,4.24007489412408,4.08445917352373,2.56652954828636,0,7.11066703153331,5.41227602528035,5.82727690592727,5.05524445014783,3.19714863213368,6.21450920753212,2.9688427812965,5.03107447621794,4.56698217468212,5.76538743140146,4.6724018571313,3.64524992120685,4.39833069653864,3.70792451601561,2.74738778147832,0,3.39710384889559,3.5334642953663,4.84875253135222,3.72783522436244,3.51336956413857,5.44561437714983,6.64188343542338,8.14742846640258,8.99854096490112,6.98886248901856,4.94309110035915,10.0650132620098,7.53926112677186,5.21472960576829,5.37002460393694,3.74018480207208,5.353961681236,2.85150218780886,2.98576729464223,1.76905930903572,3.57751155007006,3.90361328888111,3.21862946206862,3.96136685571768,3.16480117455002,3.40182495756639,4.48398020996974,4.40398105430725,4.9153640440413,4.74249584452253,3.59301552318857,2.99116911078713,3.94552318369635,2.50242524303038,3.83077383174383,4.11564272815887,2.7864797354589,5.61770549850588,4.37491442095016,7.38825098428541,4.34964122324554,7.03578179943289,6.12211008967451,5.44512891845984,5.3126342571799,7.55908853148153,7.90615412151387,3.21928081679543,4.08678698285093,3.78487654801005,4.92502392237286,4.70199095365963,5.55559952216263,5.70830299756732,3.89198614405078,6.09840850835969,6.07137213037778,9.25172592354634,6.87571473325215,4.05247676016945,4.41249676534833,4.63922860759536,5.84882221407693,7.56085349072559,6.08722003560189,9.01605216934572,8.39964669092456,8.54539709920916,6.56556357735798,9.74820435595601,8.08937467788799,8.21324589523838,6.17337947088538,7.96605184002943,4.45569199177942,5.63538678365402,6.10953983535943,6.7883370508669,4.83937157243198,4.93244989569207,7.97094799089852,6.27994911365499,6.04646103216823,3.26097889795864,3.67059232575407,3.53806191203765,2.47348323623339,2.84004169943904,3.85883455603867,2.80088436959562,2.30156909960649,2.43202840162553,3.29473695825698,2.87536413054709,3.34926852901653,4.36852742360385,2.77836765741823,3.40855085691633,5.78932225636041,3.14080423283228,4.35830247072115,5.70377417547091,5.09235257325564,6.33663670378956,6.365237782789,3.57065461329021,5.46374214001837,4.25614889086716,3.10050565508285,4.62418829106713,1.96635977658886,2.93564469172023,1.73578870297814,1.50791283939272,7.61467957346193,7.37646409528554,7.17435540392304,5.29816946959713,3.5163505977661,2.29508923527346,1.76729649043061,4.10160685241134,2.34263246577983,4.52389135238878,3.58453196928828,4.45597348164788,3.39691836946599,7.2865926301481,6.13737301613755,3.16230222357219,8.67567554338879,4.40014264145633,4.27357448801413,2.93196526836437,3.46437258242324,0,5.09839335925461,3.02323556964751,2.82907619633847,3.2483208216885,2.15204603560749,3.6179961043551,3.63533729477506,2.85197902707777,3.47640433729398,4.21674434299995,5.15677716240934,3.40439605753788,2.52085531643834,3.88076051348264,4.71541477069503,5.32020700926821,5.88617098086833,2.30368628842969,7.00269382963578,4.92810586933792,2.33015277950202,6.17479514553893,4.28704257647848,3.22928853391811,5.12659861889325,3.9392873521035,3.77524069413641,10.7847909553045,3.70850604021019,4.10090113914846,4.54051109519089,4.44466865687308,2.26042148405629,3.14396723758358,6.86334519619568,4.58941760983409,4.05859211738608,3.73139929271944,4.77335309007557,3.47969592939249,4.47302827679067,4.96824567780286,3.55450103224597,3.71216358368502,4.85511646985355,3.71940550764012,5.49687478166462,4.40690909192096,6.83473244395618,3.94585057078933,5.23307911153926,4.79829622325583,2.72231663681667,4.52059382172059,2.36538575687089,1.87771581833206,3.77592716047455,3.77493639932559,3.8653459332161,1.44015003128933,10.1123558601017,6.28448167399509,6.05994647272481,8.44485349355668,6.80301443536429,9.33802367471945,8.17329056735788,9.00906115764921,7.67345019605922,7.84930108546498,9.67931377313669,8.1864619821392,7.40831180630537,8.88264456579924,1.81384306892169,4.43971906748129,4.12683740403588,3.35769232728157,2.51146472241848,3.00291960721891,4.39563898241436,2.35805216986972,3.51100472824754,11.8597886949584,7.36520378411483,8.59343270159095,7.56154002312225,6.16574267793578,6.0431511791176,7.42524750254986,7.65546045481175,9.06284817968409,6.21312374102184,6.2272408550506,4.38927360741134,3.92687293234509,3.64660075602441,4.19226325255965,4.22840069435032,2.44471400581777,5.15087643097235,5.45562656306086,5.81203587056734,4.56262739802432,4.33840585187975,4.02658482120494,4.9939618875798,3.73330548211486,4.28664322154766,4.51948871184936,4.62982129112892,3.29668720642645,5.5935589651071,5.14303878578123,5.32427418478012,3.81497903915713,5.52316383202848,4.42314087952054,4.82303264982556,5.3049112133104,3.15683653725411,4.6173398707593,4.48913817326191,5.57584585183618,4.13718825977367,6.13846564754534,5.26785260032284,4.05103883060397,2.74791635731741,4.67863216890817,4.08255002691767,2.67803664896381,3.52946270591225,6.4922993973718|short_description=p1@Rwdd2b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53858 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q99M03 | |||
|association_with_transcript=0bp_to_ENSMUST00000039101,ENSMUST00000152430,NM_016924,uc007zui.1_5end | |||
|cluster_id=chr16:87440796..87440857,- | |||
|description=CAGE_peak_1_at_Rwdd2b_5end | |||
|id=chr16:87440796..87440857,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!4.81e-10!99;UBERON:0000344!1.47e-07!15;UBERON:0001242!6.79e-07!13;UBERON:0000060!6.79e-07!13;UBERON:0001262!6.79e-07!13;UBERON:0004786!6.79e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-10,31;UBERON:0000344,1.47e-07,15;UBERON:0011216,5.77e-07,194;UBERON:0001242,6.79e-07,13;UBERON:0001262,6.79e-07,13;UBERON:0004786,6.79e-07,13 | |||
|phase1_expression=4.48416771893423,8.72438519098403,9.55498402718026,13.6108895088074,11.0197060588196,7.55456723603504,6.30754129607919,4.77756296733832,4.22366166455,1.87251621057595,7.19115466547121,6.1424562426409,7.36163138704185,6.6439505838438,1.99865857089398,4.04950534779652,1.39912375625629,8.51747846467242,6.58149281307546,5.51706547337439,3.91199134694921,7.84398514486994,7.57479388502913,7.03966660290989,7.11168771308227,6.31655160526522,8.61523992318149,7.75696437669201,9.5011709728187,9.32511480111744,8.64748991555688,3.81018404075779,4.30545351309199,0,4.04392267651784,8.14549762256613,6.12508068787107,2.92972141515835,7.0320181007142,1.57057123192139,2.94115744015507,0,3.39857247121808,2.26614272356039,1.31790010585369,2.0190142737785,3.9119567217402,5.01457859675027,5.71184075109627,5.63846707315422,5.5994568650145,7.18762821824858,5.5368259999053,5.07753499407941,3.36093799142464,3.8588915405392,4.29800159908135,3.6097046459421,6.47412674750713,8.46385566835253,4.43681982454325,4.06613438482959,1.77858959222228,5.39939830368839,2.96659908770092,2.1314403448383,3.29560121570245,2.30530983192933,2.59224030771194,4.3201900266141,3.99617426567626,7.42692559449889,8.39300455616131,4.65465037016825,5.75072826109418,6.43453150627015,5.50579404996943,4.46905683298157,6.60508093001847,5.27545150920775,6.40413505216868,6.25096044668112,5.02529398202486,3.37657566019008,5.50073691996516,5.30331453852602,6.97621235915604,6.52398060388552,4.01348824665875,5.66786700800891,2.31891590961342,3.44169550792555,4.75979933595425,5.39703191637817,4.54843492213368,6.2723764193627,3.23022166303029,4.77204903218562,4.41636207824877,4.24007489412408,4.08445917352373,2.56652954828636,0,7.11066703153331,5.41227602528035,5.82727690592727,5.05524445014783,3.19714863213368,6.21450920753212,2.9688427812965,5.03107447621794,4.56698217468212,5.76538743140146,4.6724018571313,3.64524992120685,4.39833069653864,3.70792451601561,2.74738778147832,0,3.39710384889559,3.5334642953663,4.84875253135222,3.72783522436244,3.51336956413857,5.44561437714983,6.64188343542338,8.14742846640258,8.99854096490112,6.98886248901856,4.94309110035915,10.0650132620098,7.53926112677186,5.21472960576829,5.37002460393694,3.74018480207208,5.353961681236,2.85150218780886,2.98576729464223,1.76905930903572,3.57751155007006,3.90361328888111,3.21862946206862,3.96136685571768,3.16480117455002,3.40182495756639,4.48398020996974,4.40398105430725,4.9153640440413,4.74249584452253,3.59301552318857,2.99116911078713,3.94552318369635,2.50242524303038,3.83077383174383,4.11564272815887,2.7864797354589,5.61770549850588,4.37491442095016,7.38825098428541,4.34964122324554,7.03578179943289,6.12211008967451,5.44512891845984,5.3126342571799,7.55908853148153,7.90615412151387,3.21928081679543,4.08678698285093,3.78487654801005,4.92502392237286,4.70199095365963,5.55559952216263,5.70830299756732,3.89198614405078,6.09840850835969,6.07137213037778,9.25172592354634,6.87571473325215,4.05247676016945,4.41249676534833,4.63922860759536,5.84882221407693,7.56085349072559,6.08722003560189,9.01605216934572,8.39964669092456,8.54539709920916,6.56556357735798,9.74820435595601,8.08937467788799,8.21324589523838,6.17337947088538,7.96605184002943,4.45569199177942,5.63538678365402,6.10953983535943,6.7883370508669,4.83937157243198,4.93244989569207,7.97094799089852,6.27994911365499,6.04646103216823,3.26097889795864,3.67059232575407,3.53806191203765,2.47348323623339,2.84004169943904,3.85883455603867,2.80088436959562,2.30156909960649,2.43202840162553,3.29473695825698,2.87536413054709,3.34926852901653,4.36852742360385,2.77836765741823,3.40855085691633,5.78932225636041,3.14080423283228,4.35830247072115,5.70377417547091,5.09235257325564,6.33663670378956,6.365237782789,3.57065461329021,5.46374214001837,4.25614889086716,3.10050565508285,4.62418829106713,1.96635977658886,2.93564469172023,1.73578870297814,1.50791283939272,7.61467957346193,7.37646409528554,7.17435540392304,5.29816946959713,3.5163505977661,2.29508923527346,1.76729649043061,4.10160685241134,2.34263246577983,4.52389135238878,3.58453196928828,4.45597348164788,3.39691836946599,7.2865926301481,6.13737301613755,3.16230222357219,8.67567554338879,4.40014264145633,4.27357448801413,2.93196526836437,3.46437258242324,0,5.09839335925461,3.02323556964751,2.82907619633847,3.2483208216885,2.15204603560749,3.6179961043551,3.63533729477506,2.85197902707777,3.47640433729398,4.21674434299995,5.15677716240934,3.40439605753788,2.52085531643834,3.88076051348264,4.71541477069503,5.32020700926821,5.88617098086833,2.30368628842969,7.00269382963578,4.92810586933792,2.33015277950202,6.17479514553893,4.28704257647848,3.22928853391811,5.12659861889325,3.9392873521035,3.77524069413641,10.7847909553045,3.70850604021019,4.10090113914846,4.54051109519089,4.44466865687308,2.26042148405629,3.14396723758358,6.86334519619568,4.58941760983409,4.05859211738608,3.73139929271944,4.77335309007557,3.47969592939249,4.47302827679067,4.96824567780286,3.55450103224597,3.71216358368502,4.85511646985355,3.71940550764012,5.49687478166462,4.40690909192096,6.83473244395618,3.94585057078933,5.23307911153926,4.79829622325583,2.72231663681667,4.52059382172059,2.36538575687089,1.87771581833206,3.77592716047455,3.77493639932559,3.8653459332161,1.44015003128933,10.1123558601017,6.28448167399509,6.05994647272481,8.44485349355668,6.80301443536429,9.33802367471945,8.17329056735788,9.00906115764921,7.67345019605922,7.84930108546498,9.67931377313669,8.1864619821392,7.40831180630537,8.88264456579924,1.81384306892169,4.43971906748129,4.12683740403588,3.35769232728157,2.51146472241848,3.00291960721891,4.39563898241436,2.35805216986972,3.51100472824754,11.8597886949584,7.36520378411483,8.59343270159095,7.56154002312225,6.16574267793578,6.0431511791176,7.42524750254986,7.65546045481175,9.06284817968409,6.21312374102184,6.2272408550506,4.38927360741134,3.92687293234509,3.64660075602441,4.19226325255965,4.22840069435032,2.44471400581777,5.15087643097235,5.45562656306086,5.81203587056734,4.56262739802432,4.33840585187975,4.02658482120494,4.9939618875798,3.73330548211486,4.28664322154766,4.51948871184936,4.62982129112892,3.29668720642645,5.5935589651071,5.14303878578123,5.32427418478012,3.81497903915713,5.52316383202848,4.42314087952054,4.82303264982556,5.3049112133104,3.15683653725411,4.6173398707593,4.48913817326191,5.57584585183618,4.13718825977367,6.13846564754534,5.26785260032284,4.05103883060397,2.74791635731741,4.67863216890817,4.08255002691767,2.67803664896381,3.52946270591225,6.4922993973718 | |||
|short_description=p1@Rwdd2b | |||
}} |
Latest revision as of 19:26, 25 September 2015
Short description: | p1@Rwdd2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rwdd2b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000039101, ENSMUST00000152430, NM_016924, uc007zui.1_5end |
EntrezGene: | Rwdd2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.43e-10 | 31 |
mucosa | 1.47e-07 | 15 |
organ system subdivision | 5.77e-07 | 194 |
intestinal mucosa | 6.79e-07 | 13 |
wall of intestine | 6.79e-07 | 13 |
gastrointestinal system mucosa | 6.79e-07 | 13 |