FFCP PHASE1:Mm9::chr3:87421463..87421535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=213498 | |EntrezGene=213498 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1361 | |MCL_coexpression_id=1361 | ||
|TSSclassifier=NA | |||
|UniProt=Q68FM7,E9Q0A3 | |UniProt=Q68FM7,E9Q0A3 | ||
|association_with_transcript=0bp_to_ENSMUST00000039476,ENSMUST00000129113,ENSMUST00000136072,ENSMUST00000142799_5end | |association_with_transcript=0bp_to_ENSMUST00000039476,ENSMUST00000129113,ENSMUST00000136072,ENSMUST00000142799_5end | ||
|cluster_id=chr3:87421463..87421535,+ | |||
|description=CAGE_peak_1_at_Arhgef11_5end | |description=CAGE_peak_1_at_Arhgef11_5end | ||
|id=chr3:87421463..87421535,+ | |id=chr3:87421463..87421535,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.13e-08!33;CL:0000047!3.13e-08!33;CL:0000031!3.13e-08!33;CL:0000404!3.13e-08!33;CL:0002321!1.33e-07!70;CL:0000220!1.33e-07!70;CL:0000117!2.30e-07!23;CL:0000337!2.30e-07!23;CL:0000393!7.39e-07!39;CL:0000211!7.39e-07!39 | |ontology_enrichment_celltype=CL:0000540!3.13e-08!33;CL:0000047!3.13e-08!33;CL:0000031!3.13e-08!33;CL:0000404!3.13e-08!33;CL:0002321!1.33e-07!70;CL:0000220!1.33e-07!70;CL:0000117!2.30e-07!23;CL:0000337!2.30e-07!23;CL:0000393!7.39e-07!39;CL:0000211!7.39e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.13e-08,33;CL:0000047,3.13e-08,33;CL:0000031,3.13e-08,33;CL:0000404,3.13e-08,33;CL:0002321,1.33e-07,70;CL:0000117,2.30e-07,23;CL:0000337,2.30e-07,23;CL:0000393,7.39e-07,39;CL:0000211,7.39e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.25e-11!102;UBERON:0000924!1.25e-11!102;UBERON:0006601!1.25e-11!102;UBERON:0001017!2.00e-11!73;UBERON:0005743!2.00e-11!73;UBERON:0000073!3.22e-11!75;UBERON:0001016!3.22e-11!75;UBERON:0001049!5.17e-09!52;UBERON:0005068!5.17e-09!52;UBERON:0006241!5.17e-09!52;UBERON:0007135!5.17e-09!52;UBERON:0000955!1.61e-08!50;UBERON:0006238!1.61e-08!50;UBERON:0002616!3.51e-08!49;UBERON:0002346!3.87e-08!71;UBERON:0003075!3.87e-08!71;UBERON:0007284!3.87e-08!71;UBERON:0000033!4.12e-08!63 | |ontology_enrichment_uberon=UBERON:0004121!1.25e-11!102;UBERON:0000924!1.25e-11!102;UBERON:0006601!1.25e-11!102;UBERON:0001017!2.00e-11!73;UBERON:0005743!2.00e-11!73;UBERON:0000073!3.22e-11!75;UBERON:0001016!3.22e-11!75;UBERON:0001049!5.17e-09!52;UBERON:0005068!5.17e-09!52;UBERON:0006241!5.17e-09!52;UBERON:0007135!5.17e-09!52;UBERON:0000955!1.61e-08!50;UBERON:0006238!1.61e-08!50;UBERON:0002616!3.51e-08!49;UBERON:0002346!3.87e-08!71;UBERON:0003075!3.87e-08!71;UBERON:0007284!3.87e-08!71;UBERON:0000033!4.12e-08!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.85e-12,95;UBERON:0000924,1.85e-12,95;UBERON:0006601,1.85e-12,95;UBERON:0001017,2.00e-11,73;UBERON:0001016,3.22e-11,75;UBERON:0000073,6.87e-10,54;UBERON:0010371,1.07e-09,73;UBERON:0002346,4.97e-09,64;UBERON:0003075,4.97e-09,64;UBERON:0007284,4.97e-09,64;UBERON:0001049,5.17e-09,52;UBERON:0005068,5.17e-09,52;UBERON:0006241,5.17e-09,52;UBERON:0007135,5.17e-09,52;UBERON:0000955,3.18e-07,47;UBERON:0006238,3.18e-07,47;UBERON:0000160,6.40e-07,31;UBERON:0002616,6.65e-07,46 | |||
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| ||
|short_description=p1@Arhgef11 | |short_description=p1@Arhgef11 | ||
}} | }} |
Latest revision as of 19:05, 25 September 2015
Short description: | p1@Arhgef11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arhgef11_5end |
Coexpression cluster: | MCL_coexpression_mm9:1361 |
Association with transcript: | 0bp_to_ENSMUST00000039476, ENSMUST00000129113, ENSMUST00000136072, ENSMUST00000142799_5end |
EntrezGene: | Arhgef11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.13e-08 | 33 |
neuronal stem cell | 3.13e-08 | 33 |
neuroblast | 3.13e-08 | 33 |
electrically signaling cell | 3.13e-08 | 33 |
embryonic cell | 1.33e-07 | 70 |
CNS neuron (sensu Vertebrata) | 2.30e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.30e-07 | 23 |
electrically responsive cell | 7.39e-07 | 39 |
electrically active cell | 7.39e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.85e-12 | 95 |
ectoderm | 1.85e-12 | 95 |
presumptive ectoderm | 1.85e-12 | 95 |
central nervous system | 2.00e-11 | 73 |
nervous system | 3.22e-11 | 75 |
regional part of nervous system | 6.87e-10 | 54 |
ecto-epithelium | 1.07e-09 | 73 |
neurectoderm | 4.97e-09 | 64 |
neural plate | 4.97e-09 | 64 |
presumptive neural plate | 4.97e-09 | 64 |
neural tube | 5.17e-09 | 52 |
neural rod | 5.17e-09 | 52 |
future spinal cord | 5.17e-09 | 52 |
neural keel | 5.17e-09 | 52 |
brain | 3.18e-07 | 47 |
future brain | 3.18e-07 | 47 |
intestine | 6.40e-07 | 31 |
regional part of brain | 6.65e-07 | 46 |