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FFCP PHASE1:Mm9::chr16:81200970..81200984,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:81200970..81200984,+
|DHSsupport=NA
|short_description=p3@Ncam2
|DPIdataset=NA
|description=CAGE_peak_3_at_Ncam2_5end
|association_with_transcript=28bp_to_ENSMUST00000037785,ENSMUST00000067602,NM_001113208,NM_010954,uc007zta.2,uc007ztb.2_5end
|EntrezGene=17968
|EntrezGene=17968
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=O35136,Q71VC5
|UniProt=O35136,Q71VC5
|association_with_transcript=28bp_to_ENSMUST00000037785,ENSMUST00000067602,NM_001113208,NM_010954,uc007zta.2,uc007ztb.2_5end
|cluster_id=chr16:81200970..81200984,+
|description=CAGE_peak_3_at_Ncam2_5end
|id=chr16:81200970..81200984,+
|ontology_enrichment_celltype=CL:0000540!3.91e-14!33;CL:0000047!3.91e-14!33;CL:0000031!3.91e-14!33;CL:0000404!3.91e-14!33;CL:0000117!1.76e-12!23;CL:0000337!1.76e-12!23;CL:0000393!7.03e-10!39;CL:0000211!7.03e-10!39;CL:0000221!2.48e-09!44;CL:0000133!2.48e-09!44;CL:0002319!6.90e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.32e-13,23;CL:0000337,2.32e-13,23;CL:0000540,4.01e-12,33;CL:0000047,4.01e-12,33;CL:0000031,4.01e-12,33;CL:0000404,4.01e-12,33;CL:0000393,2.47e-09,39;CL:0000211,2.47e-09,39;CL:0000221,1.53e-08,44;CL:0000133,1.53e-08,44;CL:0002319,6.22e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.39e-26!73;UBERON:0005743!3.39e-26!73;UBERON:0000073!1.43e-25!75;UBERON:0001016!1.43e-25!75;UBERON:0002346!3.16e-25!71;UBERON:0003075!3.16e-25!71;UBERON:0007284!3.16e-25!71;UBERON:0004121!3.73e-25!102;UBERON:0000924!3.73e-25!102;UBERON:0006601!3.73e-25!102;UBERON:0000033!1.70e-23!63;UBERON:0001049!3.20e-22!52;UBERON:0005068!3.20e-22!52;UBERON:0006241!3.20e-22!52;UBERON:0007135!3.20e-22!52;UBERON:0000955!1.12e-20!50;UBERON:0006238!1.12e-20!50;UBERON:0002616!5.13e-20!49;UBERON:0003056!3.03e-19!49;UBERON:0002020!3.96e-18!34;UBERON:0003080!6.52e-17!40;UBERON:0002780!3.95e-16!39;UBERON:0001890!3.95e-16!39;UBERON:0006240!3.95e-16!39;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0007811!9.43e-11!86;UBERON:0000153!3.29e-10!94;UBERON:0000956!1.09e-09!21;UBERON:0001869!1.09e-09!21;UBERON:0000203!1.09e-09!21;UBERON:0002021!7.99e-09!10;UBERON:0000411!7.99e-09!10;UBERON:0001950!7.99e-09!10;UBERON:0002619!1.38e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.59e-29,73;UBERON:0001016,3.78e-28,75;UBERON:0000073,1.44e-27,54;UBERON:0001049,2.87e-25,52;UBERON:0005068,2.87e-25,52;UBERON:0006241,2.87e-25,52;UBERON:0007135,2.87e-25,52;UBERON:0002346,1.40e-24,64;UBERON:0003075,1.40e-24,64;UBERON:0007284,1.40e-24,64;UBERON:0004121,1.26e-23,95;UBERON:0000924,1.26e-23,95;UBERON:0006601,1.26e-23,95;UBERON:0002020,1.49e-22,34;UBERON:0010371,2.90e-21,73;UBERON:0000955,1.07e-19,47;UBERON:0006238,1.07e-19,47;UBERON:0002616,9.99e-19,46;UBERON:0003528,7.86e-17,29;UBERON:0002791,7.86e-17,29;UBERON:0001893,7.86e-17,29;UBERON:0003080,5.52e-16,40;UBERON:0010314,3.95e-15,92;UBERON:0002780,7.19e-15,39;UBERON:0001890,7.19e-15,39;UBERON:0006240,7.19e-15,39;UBERON:0003056,8.58e-15,49;UBERON:0002021,3.33e-14,10;UBERON:0000411,3.33e-14,10;UBERON:0001950,3.33e-14,10;UBERON:0003076,2.33e-10,12;UBERON:0003057,2.33e-10,12;UBERON:0002619,2.66e-10,17;UBERON:0002420,8.46e-10,8;UBERON:0007245,8.46e-10,8;UBERON:0010009,8.46e-10,8;UBERON:0010011,8.46e-10,8;UBERON:0000454,8.46e-10,8;UBERON:0000956,3.22e-09,21;UBERON:0001869,3.22e-09,21;UBERON:0000203,3.22e-09,21;UBERON:0002240,1.44e-08,6;UBERON:0005174,1.44e-08,6;UBERON:0001137,1.44e-08,6;UBERON:0001948,1.88e-07,5;UBERON:0002315,1.88e-07,5
|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0.198581902401771,2.61199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.04632921719196,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0,0.518448061542388,0.405017814995072,0.841299845405528,4.85606673486466,5.52171352379034,0.244981598429908,0.383381884072945,0.919218786610021,6.60695285996332,5.49055553766307,6.75868746327471,2.2420668914133,2.37867873366265,1.56274011167028,2.79182999001381,10.1297269805702,8.40390362772456,14.7314292736834,8.82704420954438,4.28718725398191,0,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,1.97180787687353,0,0,0,0,0,0,0.68510327831436,0,0,0.520455980298408,0,0.461230994512117,0.452167921657868,1.17588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,4.9772735491963,4.81727425670947,0,0,0,0,10.1857634795279,7.77751024791665,2.26177833803156,7.30062144807561,8.18289463457058,7.48036960414416,6.65189178577806,0,0,0,1.47309299120532,0.260240885925407,0.459804208866946,0.720248519221397,0.30140963567143,1.08858398642125,0.896796041993948,0.655912071918102,1.81092359517311,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,6.09840850835969,1.85228302282712,0.330418782983798,0,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0,0.570676878337677,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,6.10092241953609,6.68106613575558,0,0,0.631016438832513,1.56175497718655,1.29254038639679,0.238968797952552,0.668396022247182,0,0.809621403349789,1.46127928955656,1.58115111178609,4.81981974632711,0,0.178065603667255,0.488660878060728,0,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0.356497378384721,0.948110273807448,0,0,1.36175842301515,0,0.258717367565509,0.214337035031592,0.709360934569094,0.713475270408282,0.493647061806363,0.608929898229199,0,0,0,0.16488625294148,0.322928853391811,0,0.119372344003136,0,0.291480836629851,5.7481843623258,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.87345025498471,0.269728692769641,0.991841468704031,0.523511883968059,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,10.7302850097243,7.36520378411483,9.16632821503035,10.4830441229649,8.22099023724771,10.5755145634558,5.40018000185445,6.75481804836331,3.62513927187364,9.83744592328458,0,2.39414924040619,0.512200817262403,1.21553358534147,0.838452650511929,0.735374033800057,1.55572709461131,0.412070114477788,0.962757628775446,0.505394423527595,1.2673964994512,0.754505365544305,1.591905626988,1.34452820050225,1.55075766180156,0.952587382566147,1.27472758539341,1.54327376370964,2.47251540481984,1.03039244094078,0.685738504770831,1.06485483695602,1.66905332963125,1.74415699958794,1.50575008664529,0.930760686808441,1.64635175585495,0.789209134313529,1.35804113845862,0.561142271657738,1.30498519936592,0.985044823755635,2.45538625901814,1.70430525304563,0.578719832943424,1.99848462350357,0.701794825336225,1.93383948643468,0.57386499620653,0.220591419119515,0.695603506861264
|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0.198581902401771,2.61199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.04632921719196,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0,0.518448061542388,0.405017814995072,0.841299845405528,4.85606673486466,5.52171352379034,0.244981598429908,0.383381884072945,0.919218786610021,6.60695285996332,5.49055553766307,6.75868746327471,2.2420668914133,2.37867873366265,1.56274011167028,2.79182999001381,10.1297269805702,8.40390362772456,14.7314292736834,8.82704420954438,4.28718725398191,0,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,1.97180787687353,0,0,0,0,0,0,0.68510327831436,0,0,0.520455980298408,0,0.461230994512117,0.452167921657868,1.17588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,4.9772735491963,4.81727425670947,0,0,0,0,10.1857634795279,7.77751024791665,2.26177833803156,7.30062144807561,8.18289463457058,7.48036960414416,6.65189178577806,0,0,0,1.47309299120532,0.260240885925407,0.459804208866946,0.720248519221397,0.30140963567143,1.08858398642125,0.896796041993948,0.655912071918102,1.81092359517311,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,6.09840850835969,1.85228302282712,0.330418782983798,0,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0,0.570676878337677,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,6.10092241953609,6.68106613575558,0,0,0.631016438832513,1.56175497718655,1.29254038639679,0.238968797952552,0.668396022247182,0,0.809621403349789,1.46127928955656,1.58115111178609,4.81981974632711,0,0.178065603667255,0.488660878060728,0,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0.356497378384721,0.948110273807448,0,0,1.36175842301515,0,0.258717367565509,0.214337035031592,0.709360934569094,0.713475270408282,0.493647061806363,0.608929898229199,0,0,0,0.16488625294148,0.322928853391811,0,0.119372344003136,0,0.291480836629851,5.7481843623258,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.87345025498471,0.269728692769641,0.991841468704031,0.523511883968059,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,10.7302850097243,7.36520378411483,9.16632821503035,10.4830441229649,8.22099023724771,10.5755145634558,5.40018000185445,6.75481804836331,3.62513927187364,9.83744592328458,0,2.39414924040619,0.512200817262403,1.21553358534147,0.838452650511929,0.735374033800057,1.55572709461131,0.412070114477788,0.962757628775446,0.505394423527595,1.2673964994512,0.754505365544305,1.591905626988,1.34452820050225,1.55075766180156,0.952587382566147,1.27472758539341,1.54327376370964,2.47251540481984,1.03039244094078,0.685738504770831,1.06485483695602,1.66905332963125,1.74415699958794,1.50575008664529,0.930760686808441,1.64635175585495,0.789209134313529,1.35804113845862,0.561142271657738,1.30498519936592,0.985044823755635,2.45538625901814,1.70430525304563,0.578719832943424,1.99848462350357,0.701794825336225,1.93383948643468,0.57386499620653,0.220591419119515,0.695603506861264
|short_description=p3@Ncam2
}}
}}

Latest revision as of 18:44, 25 September 2015

Short description:p3@Ncam2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ncam2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 28bp_to_ENSMUST00000037785, ENSMUST00000067602, NM_001113208, NM_010954, uc007zta.2, uc007ztb.2_5end
EntrezGene:Ncam2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ncam2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.10
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.32e-1323
neuroblast (sensu Vertebrata)2.32e-1323
neuron4.01e-1233
neuronal stem cell4.01e-1233
neuroblast4.01e-1233
electrically signaling cell4.01e-1233
electrically responsive cell2.47e-0939
electrically active cell2.47e-0939
ectodermal cell1.53e-0844
neurectodermal cell1.53e-0844
neural cell6.22e-0843

Uber anatomy
Ontology termp-valuen
central nervous system2.59e-2973
nervous system3.78e-2875
regional part of nervous system1.44e-2754
neural tube2.87e-2552
neural rod2.87e-2552
future spinal cord2.87e-2552
neural keel2.87e-2552
neurectoderm1.40e-2464
neural plate1.40e-2464
presumptive neural plate1.40e-2464
ectoderm-derived structure1.26e-2395
ectoderm1.26e-2395
presumptive ectoderm1.26e-2395
gray matter1.49e-2234
ecto-epithelium2.90e-2173
brain1.07e-1947
future brain1.07e-1947
regional part of brain9.99e-1946
brain grey matter7.86e-1729
regional part of telencephalon7.86e-1729
telencephalon7.86e-1729
anterior neural tube5.52e-1640
structure with developmental contribution from neural crest3.95e-1592
regional part of forebrain7.19e-1539
forebrain7.19e-1539
future forebrain7.19e-1539
pre-chordal neural plate8.58e-1549
occipital lobe3.33e-1410
visual cortex3.33e-1410
neocortex3.33e-1410
posterior neural tube2.33e-1012
chordal neural plate2.33e-1012
regional part of cerebral cortex2.66e-1017
basal ganglion8.46e-108
nuclear complex of neuraxis8.46e-108
aggregate regional part of brain8.46e-108
collection of basal ganglia8.46e-108
cerebral subcortex8.46e-108
cerebral cortex3.22e-0921
cerebral hemisphere3.22e-0921
pallium3.22e-0921
spinal cord1.44e-086
dorsal region element1.44e-086
dorsum1.44e-086
regional part of spinal cord1.88e-075
gray matter of spinal cord1.88e-075
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