Personal tools

FFCP PHASE1:Mm9::chr7:123182248..123182264,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20679
|EntrezGene=20679
|HGNC=
|HGNC=
|MCL_coexpression_id=3591
|MCL_coexpression_id=3591
|TSSclassifier=NA
|UniProt=E9PUW0,Q8BSS6
|UniProt=E9PUW0,Q8BSS6
|association_with_transcript=0bp_to_ENSMUST00000166877,NM_001025559,uc009jis.1,uc009jiu.1_5end
|association_with_transcript=0bp_to_ENSMUST00000166877,NM_001025559,uc009jis.1,uc009jiu.1_5end
|cluster_id=chr7:123182248..123182264,-
|description=CAGE_peak_3_at_Sox6_5end
|description=CAGE_peak_3_at_Sox6_5end
|id=chr7:123182248..123182264,-
|id=chr7:123182248..123182264,-
|ontology_enrichment_celltype=CL:0000117!5.43e-08!23;CL:0000337!5.43e-08!23
|ontology_enrichment_celltype=CL:0000117!5.43e-08!23;CL:0000337!5.43e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.93e-09,23;CL:0000337,6.93e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!9.71e-11!34;UBERON:0000956!3.32e-09!21;UBERON:0001869!3.32e-09!21;UBERON:0000203!3.32e-09!21;UBERON:0002791!3.43e-09!29;UBERON:0003528!3.43e-09!29;UBERON:0001893!3.43e-09!29;UBERON:0002619!8.06e-08!17;UBERON:0003080!5.45e-07!40;UBERON:0001049!5.88e-07!52;UBERON:0005068!5.88e-07!52;UBERON:0006241!5.88e-07!52;UBERON:0007135!5.88e-07!52;UBERON:0000033!6.67e-07!63;UBERON:0003102!7.83e-07!23;UBERON:0003056!7.84e-07!49
|ontology_enrichment_uberon=UBERON:0002020!9.71e-11!34;UBERON:0000956!3.32e-09!21;UBERON:0001869!3.32e-09!21;UBERON:0000203!3.32e-09!21;UBERON:0002791!3.43e-09!29;UBERON:0003528!3.43e-09!29;UBERON:0001893!3.43e-09!29;UBERON:0002619!8.06e-08!17;UBERON:0003080!5.45e-07!40;UBERON:0001049!5.88e-07!52;UBERON:0005068!5.88e-07!52;UBERON:0006241!5.88e-07!52;UBERON:0007135!5.88e-07!52;UBERON:0000033!6.67e-07!63;UBERON:0003102!7.83e-07!23;UBERON:0003056!7.84e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.00e-10,34;UBERON:0003528,1.06e-08,29;UBERON:0002791,1.06e-08,29;UBERON:0001893,1.06e-08,29;UBERON:0002102,1.11e-08,7;UBERON:0004710,1.11e-08,7;UBERON:0005419,1.11e-08,7;UBERON:0005417,1.11e-08,7;UBERON:0005729,1.11e-08,7;UBERON:0000956,3.69e-08,21;UBERON:0001869,3.69e-08,21;UBERON:0000203,3.69e-08,21;UBERON:0002021,2.11e-07,10;UBERON:0000411,2.11e-07,10;UBERON:0001950,2.11e-07,10;UBERON:0010708,2.54e-07,8;UBERON:0003102,4.24e-07,22;UBERON:0000026,7.08e-07,12;UBERON:0004708,7.08e-07,12;UBERON:0002101,7.08e-07,12;UBERON:0004357,7.08e-07,12;UBERON:0004347,7.08e-07,12;UBERON:0005732,7.08e-07,12;UBERON:0005733,7.08e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.777719596297134,0,1.43752564364972,0,0,0,0,0,0,3.23706337375356,2.64495489636016,1.90149421051854,0,0,0,0,0,0.599200221036809,0.384218305321555,1.76272340924412,2.70011876663381,1.26194976810829,1.42825492201902,1.10434270475807,3.67472397644862,3.1629005436018,0.919218786610021,2.20231761998777,1.27687338085188,1.53606533256243,1.18697658957174,1.18933936683133,1.04182674111352,0.558365998002762,0,2.13917546887534,2.65165726926301,1.99320353118744,0.745597783301202,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.150722640552623,0.705532242814229,0,0,0.433798070759735,0.884610551949874,4.04417124868523,0.441683036920787,1.93950101254089,0,0,0,0.255457055208591,0,0,0,1.79748767285787,0,2.76439574648302,1.21677024134594,1.02286182932132,0.83115217823824,1.29793010454206,0.101839363850316,0.497627882440372,0,0.210441855886474,0.130120442962704,0.689706313300419,0.180062129805349,0.452114453507145,0.544291993210623,0.512454881139399,0.374806898238915,0.258703370739016,2.58681591519411,13.8047438522508,12.4925298156404,6.57587197282724,12.5121262151519,10.0993128291428,6.1734640922383,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,1.18372367792605,0.393528463494808,0.925602677324269,0,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0,1.05144974282064,0.92614151141356,0,0,0.853153002140936,1.62565670302307,1.28867461322093,1.21010114774006,0.444756087689741,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.795825888164603,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0.228497025219458,1.1270773567308,0.407302655690628,0,0,0,0,0,0,0,0,0.393117990226406,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.509235257325564,0,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.35163505977661,0,0.504941854408746,0,0,0,0.477937595905104,0,0,0,0,0.395287777946524,0.642642632843614,0,0,0.162886959353576,0.329940245945071,0,2.18502572539483,0.906970670894253,0.943025398779491,1.18120757152309,0.307435147943927,0.516856586336442,0,1.42598951353889,0,0,0,0,0.720244376125241,0,0.643011105094777,0,0,0.164549020602121,0,0,0,0,5.11147384118588,3.71368181400583,2.65376869683886,1.07435109602823,0.820704498725306,0.582961673259701,0.18542530201051,0,1.23832120777933,0,0,0,0,0,0,0,1.90934123603023,0.474503990371703,1.21991680276109,2.05210147561422,4.59994251231831,4.80397640241591,8.09186078308924,5.62043498932284,2.09404753587224,0.648074866458964,0,0,1.64468200648377,0.165458490457098,0.777804753376191,0.387479470433193,0.506868376472335,1.17357238645754,0.781226309063701,0.524296722128554,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,7.25537227568676,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.214368379079066,0,5.64751842617067,6.44455331110048,3.43737308063638,2.06223818812425,3.42541259885321,1.5107877947794,0.675022500231806,2.70192721934532,2.26571204492102,2.5888015587591,1.03787347584177,3.19219898720825,4.43907374960749,3.64660075602441,1.25767897576789,1.83843508450014,1.55572709461131,1.85431551515005,2.24643446714271,2.02157769411038,2.02783439912192,1.50901073108861,1.31098110457835,1.34452820050225,1.60819313075717,2.85776214769844,1.0429589335037,1.15745532278223,2.88460130562315,2.20798380201596,1.71434626192708,1.77475806159337,2.38436189947321,1.45346416632329,1.88218760830661,1.26921911837515,0.914639864363863,0.789209134313529,1.90125759384206,3.92799590160417,0.593175090620871,1.0835493061312,1.22769312950907,1.23949472948773,3.08650577569826,3.74715866906919,2.57324769289949,1.93383948643468,7.26895661861605,3.75005412503176,2.08681052058379
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.777719596297134,0,1.43752564364972,0,0,0,0,0,0,3.23706337375356,2.64495489636016,1.90149421051854,0,0,0,0,0,0.599200221036809,0.384218305321555,1.76272340924412,2.70011876663381,1.26194976810829,1.42825492201902,1.10434270475807,3.67472397644862,3.1629005436018,0.919218786610021,2.20231761998777,1.27687338085188,1.53606533256243,1.18697658957174,1.18933936683133,1.04182674111352,0.558365998002762,0,2.13917546887534,2.65165726926301,1.99320353118744,0.745597783301202,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.150722640552623,0.705532242814229,0,0,0.433798070759735,0.884610551949874,4.04417124868523,0.441683036920787,1.93950101254089,0,0,0,0.255457055208591,0,0,0,1.79748767285787,0,2.76439574648302,1.21677024134594,1.02286182932132,0.83115217823824,1.29793010454206,0.101839363850316,0.497627882440372,0,0.210441855886474,0.130120442962704,0.689706313300419,0.180062129805349,0.452114453507145,0.544291993210623,0.512454881139399,0.374806898238915,0.258703370739016,2.58681591519411,13.8047438522508,12.4925298156404,6.57587197282724,12.5121262151519,10.0993128291428,6.1734640922383,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,1.18372367792605,0.393528463494808,0.925602677324269,0,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0,1.05144974282064,0.92614151141356,0,0,0.853153002140936,1.62565670302307,1.28867461322093,1.21010114774006,0.444756087689741,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.795825888164603,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0.228497025219458,1.1270773567308,0.407302655690628,0,0,0,0,0,0,0,0,0.393117990226406,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.509235257325564,0,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.35163505977661,0,0.504941854408746,0,0,0,0.477937595905104,0,0,0,0,0.395287777946524,0.642642632843614,0,0,0.162886959353576,0.329940245945071,0,2.18502572539483,0.906970670894253,0.943025398779491,1.18120757152309,0.307435147943927,0.516856586336442,0,1.42598951353889,0,0,0,0,0.720244376125241,0,0.643011105094777,0,0,0.164549020602121,0,0,0,0,5.11147384118588,3.71368181400583,2.65376869683886,1.07435109602823,0.820704498725306,0.582961673259701,0.18542530201051,0,1.23832120777933,0,0,0,0,0,0,0,1.90934123603023,0.474503990371703,1.21991680276109,2.05210147561422,4.59994251231831,4.80397640241591,8.09186078308924,5.62043498932284,2.09404753587224,0.648074866458964,0,0,1.64468200648377,0.165458490457098,0.777804753376191,0.387479470433193,0.506868376472335,1.17357238645754,0.781226309063701,0.524296722128554,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,7.25537227568676,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.214368379079066,0,5.64751842617067,6.44455331110048,3.43737308063638,2.06223818812425,3.42541259885321,1.5107877947794,0.675022500231806,2.70192721934532,2.26571204492102,2.5888015587591,1.03787347584177,3.19219898720825,4.43907374960749,3.64660075602441,1.25767897576789,1.83843508450014,1.55572709461131,1.85431551515005,2.24643446714271,2.02157769411038,2.02783439912192,1.50901073108861,1.31098110457835,1.34452820050225,1.60819313075717,2.85776214769844,1.0429589335037,1.15745532278223,2.88460130562315,2.20798380201596,1.71434626192708,1.77475806159337,2.38436189947321,1.45346416632329,1.88218760830661,1.26921911837515,0.914639864363863,0.789209134313529,1.90125759384206,3.92799590160417,0.593175090620871,1.0835493061312,1.22769312950907,1.23949472948773,3.08650577569826,3.74715866906919,2.57324769289949,1.93383948643468,7.26895661861605,3.75005412503176,2.08681052058379
|short_description=p3@Sox6
|short_description=p3@Sox6
}}
}}

Latest revision as of 18:40, 25 September 2015

Short description:p3@Sox6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sox6_5end
Coexpression cluster:MCL_coexpression_mm9:3591
Association with transcript: 0bp_to_ENSMUST00000166877, NM_001025559, uc009jis.1, uc009jiu.1_5end
EntrezGene:Sox6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sox6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H213.80
forelimb, embryo E13.CNhs10589.384-1E212.49
forelimb, embryo E14.CNhs10577.413-26A86.58
forelimb, embryo E15.CNhs11007.437-20E712.51
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B56.17
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B88.09
stomach, neonate N07.CNhs11210.718-18A95.62
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B47.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.93e-0923
neuroblast (sensu Vertebrata)6.93e-0923

Uber anatomy
Ontology termp-valuen
gray matter4.00e-1034
brain grey matter1.06e-0829
regional part of telencephalon1.06e-0829
telencephalon1.06e-0829
forelimb1.11e-087
pectoral appendage1.11e-087
pectoral appendage bud1.11e-087
forelimb bud1.11e-087
forelimb/pectoral fin field1.11e-087
cerebral cortex3.69e-0821
cerebral hemisphere3.69e-0821
pallium3.69e-0821
occipital lobe2.11e-0710
visual cortex2.11e-0710
neocortex2.11e-0710
pectoral complex2.54e-078
surface structure4.24e-0722
appendage7.08e-0712
paired limb/fin7.08e-0712
limb7.08e-0712
paired limb/fin bud7.08e-0712
limb bud7.08e-0712
limb/fin field7.08e-0712
limb field7.08e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:123182248..123182264,-&oldid=4207558"