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FFCP PHASE1:Mm9::chr7:122968213..122968266,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20679
|EntrezGene=20679
|HGNC=
|HGNC=
|MCL_coexpression_id=1605
|TSSclassifier=NA
|UniProt=E9PUW0
|UniProt=E9PUW0
|association_with_transcript=0bp_to_ENSMUST00000169129,uc009jio.1_5end
|association_with_transcript=0bp_to_ENSMUST00000169129,uc009jio.1_5end
|cluster_id=chr7:122968213..122968266,-
|description=CAGE_peak_4_at_Sox6_5end
|description=CAGE_peak_4_at_Sox6_5end
|id=chr7:122968213..122968266,-
|id=chr7:122968213..122968266,-
|ontology_enrichment_celltype=CL:0000221!4.48e-17!44;CL:0000133!4.48e-17!44;CL:0002319!9.90e-17!43;CL:0000540!7.34e-15!33;CL:0000047!7.34e-15!33;CL:0000031!7.34e-15!33;CL:0000404!7.34e-15!33;CL:0000055!4.02e-12!50;CL:0000393!1.19e-10!39;CL:0000211!1.19e-10!39;CL:0000117!7.66e-09!23;CL:0000337!7.66e-09!23;CL:0000107!2.78e-07!9
|ontology_enrichment_celltype=CL:0000221!4.48e-17!44;CL:0000133!4.48e-17!44;CL:0002319!9.90e-17!43;CL:0000540!7.34e-15!33;CL:0000047!7.34e-15!33;CL:0000031!7.34e-15!33;CL:0000404!7.34e-15!33;CL:0000055!4.02e-12!50;CL:0000393!1.19e-10!39;CL:0000211!1.19e-10!39;CL:0000117!7.66e-09!23;CL:0000337!7.66e-09!23;CL:0000107!2.78e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000221,1.56e-23,44;CL:0000133,1.56e-23,44;CL:0002319,5.83e-23,43;CL:0000540,1.20e-20,33;CL:0000047,1.20e-20,33;CL:0000031,1.20e-20,33;CL:0000404,1.20e-20,33;CL:0000393,4.58e-16,39;CL:0000211,4.58e-16,39;CL:0002321,1.02e-11,70;CL:0000107,3.52e-11,9;CL:0000117,5.39e-11,23;CL:0000337,5.39e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.17e-25!75;UBERON:0001016!2.17e-25!75;UBERON:0001017!1.34e-24!73;UBERON:0005743!1.34e-24!73;UBERON:0004121!7.58e-21!102;UBERON:0000924!7.58e-21!102;UBERON:0006601!7.58e-21!102;UBERON:0001049!2.26e-14!52;UBERON:0005068!2.26e-14!52;UBERON:0006241!2.26e-14!52;UBERON:0007135!2.26e-14!52;UBERON:0002020!7.79e-14!34;UBERON:0002346!1.46e-12!71;UBERON:0003075!1.46e-12!71;UBERON:0007284!1.46e-12!71;UBERON:0000955!1.72e-12!50;UBERON:0006238!1.72e-12!50;UBERON:0000033!2.80e-12!63;UBERON:0002616!5.29e-12!49;UBERON:0002791!1.25e-10!29;UBERON:0003528!1.25e-10!29;UBERON:0001893!1.25e-10!29;UBERON:0003080!1.09e-08!40;UBERON:0000956!1.90e-08!21;UBERON:0001869!1.90e-08!21;UBERON:0000203!1.90e-08!21;UBERON:0002780!3.15e-08!39;UBERON:0001890!3.15e-08!39;UBERON:0006240!3.15e-08!39;UBERON:0000010!9.59e-08!11;UBERON:0003056!1.08e-07!49;UBERON:0003076!2.63e-07!12;UBERON:0003057!2.63e-07!12;UBERON:0002410!2.78e-07!9;UBERON:0000468!7.23e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.43e-36,75;UBERON:0001017,3.37e-36,73;UBERON:0004121,1.81e-27,95;UBERON:0000924,1.81e-27,95;UBERON:0006601,1.81e-27,95;UBERON:0000073,5.94e-22,54;UBERON:0001049,7.92e-21,52;UBERON:0005068,7.92e-21,52;UBERON:0006241,7.92e-21,52;UBERON:0007135,7.92e-21,52;UBERON:0002346,9.14e-20,64;UBERON:0003075,9.14e-20,64;UBERON:0007284,9.14e-20,64;UBERON:0002020,2.94e-18,34;UBERON:0010371,1.36e-17,73;UBERON:0000955,1.09e-15,47;UBERON:0006238,1.09e-15,47;UBERON:0002616,6.27e-15,46;UBERON:0003528,3.30e-13,29;UBERON:0002791,3.30e-13,29;UBERON:0001893,3.30e-13,29;UBERON:0003076,7.21e-12,12;UBERON:0003057,7.21e-12,12;UBERON:0000956,7.26e-12,21;UBERON:0001869,7.26e-12,21;UBERON:0000203,7.26e-12,21;UBERON:0010314,2.53e-11,92;UBERON:0003080,2.70e-11,40;UBERON:0002410,3.52e-11,9;UBERON:0000010,8.81e-11,11;UBERON:0002780,1.41e-10,39;UBERON:0001890,1.41e-10,39;UBERON:0006240,1.41e-10,39;UBERON:0002619,5.93e-09,17;UBERON:0003056,9.50e-09,49;UBERON:0002240,2.66e-08,6;UBERON:0005174,2.66e-08,6;UBERON:0001137,2.66e-08,6;UBERON:0001948,5.12e-07,5;UBERON:0002315,5.12e-07,5;UBERON:0002021,7.53e-07,10;UBERON:0000411,7.53e-07,10;UBERON:0001950,7.53e-07,10
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,2.41654801007919,1.94429899074283,0.839918529752175,0,0,0,0,0.257259436035947,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0,0,0,0,0,6.89080254192331,10.7581125490035,2.38486108309499,2.70011876663381,2.73422449756797,6.56997264128748,4.8591079009355,0.857435594504678,1.0543001812006,0,1.10115880999389,2.93680877595932,2.91852413186863,0.263772575460388,0.640413505216868,2.08365348222704,1.3959149950069,1.68828783009504,2.75036845998258,5.30331453852602,6.69146899755784,3.35519002485541,0.605809546665472,4.08086424576642,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,3.84979432242953,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0,0.722996784599558,0,0.808834249737046,0,1.45462575940567,0,3.51336956413857,4.60782754989601,0,0,0,0,3.14560342750128,3.20250421973039,0.753926112677186,2.25971616249959,4.09144731728529,4.57133698031032,6.81413304884582,0.101839363850316,0,0,0.420883711772948,0,0,0,0.30140963567143,0.340182495756639,0.2562274405697,0.937017245597288,2.32833033665114,0.862271971731369,2.64748512234947,0.703804496655795,0.219195732427575,0.556094498451196,0.348252166522167,0,0.59710280045548,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,3.99550902271842,5.24813523134351,0,0,0.426576501070468,0.928946687441754,0.515469845288373,0.80673409849337,0.444756087689741,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,1.22190796707189,0.969762435838129,0.911765658574141,1.07502113111237,1.03327103585722,0.941992367048249,0.370191491765402,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.977789858652155,0.848725428875941,0.938760993154008,0.837531287209079,0.238043640886014,0.390267295715598,0,0.221464689648775,0.478364305972461,0,0.172684981865896,0,0,0,0,0.827810238914197,4.49541651965817,9.37693492737625,0,0.757412781613119,3.15508219416257,3.90438744296638,5.17016154558717,4.77937595905104,7.79795359288379,8.77537245445381,4.85772842009873,3.21481443702443,7.51046778098395,2.89189184779626,1.41940085208269,0,0.325773918707152,3.79431282836832,0,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0.36012218806262,0,0,0.177340233642274,0,0.493647061806363,0,0.23467170806371,0,0,0.65954501176592,0.161464426695906,0.120625849856312,0.358117032009409,0.164140899745061,0,10.9400928186201,0,0,0,0,0.27338845544205,0,0,0,0,0,0.474503990371703,0.609958401380546,0.756037385752609,1.04544148007234,0.436725127492355,0.539457385539283,0.247960367176008,0,0,0.621339313086926,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0,0.750729901804728,0.183151624267265,0.857473516316263,0,6.21227026878773,5.9842280745933,10.8850147553485,2.57779773515531,4.11049511862385,0,2.02506750069542,0.900642406448441,3.17199686288943,2.5888015587591,2.80225838477277,4.78829848081237,2.90247129782028,1.45864030240976,0.628839487883947,0.367687016900028,0.888986911206461,1.44224540067226,2.88827288632634,0.252697211763798,0.25347929989024,0.377252682772152,0.655490552289177,0.832326981263301,0.976402972245426,0.476293691283074,1.15884325944855,0.578727661391115,0.412085900803307,1.47198920134397,1.02860775715625,1.4198064492747,1.1921809497366,0.872078499793971,1.41164070622996,0.846146078916765,0.73171189149109,0.789209134313529,1.08643291076689,0,0.355905054372522,1.28055827088233,1.22769312950907,1.08455788830176,1.15743966588685,0.999242311751784,1.63752125911786,0.859484216193193,0.382576664137687,1.10295709559758,0.695603506861264
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,2.41654801007919,1.94429899074283,0.839918529752175,0,0,0,0,0.257259436035947,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0,0,0,0,0,6.89080254192331,10.7581125490035,2.38486108309499,2.70011876663381,2.73422449756797,6.56997264128748,4.8591079009355,0.857435594504678,1.0543001812006,0,1.10115880999389,2.93680877595932,2.91852413186863,0.263772575460388,0.640413505216868,2.08365348222704,1.3959149950069,1.68828783009504,2.75036845998258,5.30331453852602,6.69146899755784,3.35519002485541,0.605809546665472,4.08086424576642,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,3.84979432242953,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0,0.722996784599558,0,0.808834249737046,0,1.45462575940567,0,3.51336956413857,4.60782754989601,0,0,0,0,3.14560342750128,3.20250421973039,0.753926112677186,2.25971616249959,4.09144731728529,4.57133698031032,6.81413304884582,0.101839363850316,0,0,0.420883711772948,0,0,0,0.30140963567143,0.340182495756639,0.2562274405697,0.937017245597288,2.32833033665114,0.862271971731369,2.64748512234947,0.703804496655795,0.219195732427575,0.556094498451196,0.348252166522167,0,0.59710280045548,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,3.99550902271842,5.24813523134351,0,0,0.426576501070468,0.928946687441754,0.515469845288373,0.80673409849337,0.444756087689741,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,1.22190796707189,0.969762435838129,0.911765658574141,1.07502113111237,1.03327103585722,0.941992367048249,0.370191491765402,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.977789858652155,0.848725428875941,0.938760993154008,0.837531287209079,0.238043640886014,0.390267295715598,0,0.221464689648775,0.478364305972461,0,0.172684981865896,0,0,0,0,0.827810238914197,4.49541651965817,9.37693492737625,0,0.757412781613119,3.15508219416257,3.90438744296638,5.17016154558717,4.77937595905104,7.79795359288379,8.77537245445381,4.85772842009873,3.21481443702443,7.51046778098395,2.89189184779626,1.41940085208269,0,0.325773918707152,3.79431282836832,0,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0.36012218806262,0,0,0.177340233642274,0,0.493647061806363,0,0.23467170806371,0,0,0.65954501176592,0.161464426695906,0.120625849856312,0.358117032009409,0.164140899745061,0,10.9400928186201,0,0,0,0,0.27338845544205,0,0,0,0,0,0.474503990371703,0.609958401380546,0.756037385752609,1.04544148007234,0.436725127492355,0.539457385539283,0.247960367176008,0,0,0.621339313086926,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0,0.750729901804728,0.183151624267265,0.857473516316263,0,6.21227026878773,5.9842280745933,10.8850147553485,2.57779773515531,4.11049511862385,0,2.02506750069542,0.900642406448441,3.17199686288943,2.5888015587591,2.80225838477277,4.78829848081237,2.90247129782028,1.45864030240976,0.628839487883947,0.367687016900028,0.888986911206461,1.44224540067226,2.88827288632634,0.252697211763798,0.25347929989024,0.377252682772152,0.655490552289177,0.832326981263301,0.976402972245426,0.476293691283074,1.15884325944855,0.578727661391115,0.412085900803307,1.47198920134397,1.02860775715625,1.4198064492747,1.1921809497366,0.872078499793971,1.41164070622996,0.846146078916765,0.73171189149109,0.789209134313529,1.08643291076689,0,0.355905054372522,1.28055827088233,1.22769312950907,1.08455788830176,1.15743966588685,0.999242311751784,1.63752125911786,0.859484216193193,0.382576664137687,1.10295709559758,0.695603506861264
|short_description=p4@Sox6
|short_description=p4@Sox6
}}
}}

Latest revision as of 18:36, 25 September 2015

Short description:p4@Sox6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sox6_5end
Coexpression cluster:MCL_coexpression_mm9:1605
Association with transcript: 0bp_to_ENSMUST00000169129, uc009jio.1_5end
EntrezGene:Sox6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sox6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E810.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F94.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B26.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A39.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.43e-3675
central nervous system3.37e-3673
ectoderm-derived structure1.81e-2795
ectoderm1.81e-2795
presumptive ectoderm1.81e-2795
regional part of nervous system5.94e-2254
neural tube7.92e-2152
neural rod7.92e-2152
future spinal cord7.92e-2152
neural keel7.92e-2152
neurectoderm9.14e-2064
neural plate9.14e-2064
presumptive neural plate9.14e-2064
gray matter2.94e-1834
ecto-epithelium1.36e-1773
brain1.09e-1547
future brain1.09e-1547
regional part of brain6.27e-1546
brain grey matter3.30e-1329
regional part of telencephalon3.30e-1329
telencephalon3.30e-1329
posterior neural tube7.21e-1212
chordal neural plate7.21e-1212
cerebral cortex7.26e-1221
cerebral hemisphere7.26e-1221
pallium7.26e-1221
structure with developmental contribution from neural crest2.53e-1192
anterior neural tube2.70e-1140
autonomic nervous system3.52e-119
peripheral nervous system8.81e-1111
regional part of forebrain1.41e-1039
forebrain1.41e-1039
future forebrain1.41e-1039
regional part of cerebral cortex5.93e-0917
pre-chordal neural plate9.50e-0949
spinal cord2.66e-086
dorsal region element2.66e-086
dorsum2.66e-086
regional part of spinal cord5.12e-075
gray matter of spinal cord5.12e-075
occipital lobe7.53e-0710
visual cortex7.53e-0710
neocortex7.53e-0710
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