FFCP PHASE1:Mm9::chr7:121889453..121889464,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=233752 | |EntrezGene=233752 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=Q3HNM7,G3UW77 | |UniProt=Q3HNM7,G3UW77 | ||
|association_with_transcript=173bp_to_ENSMUST00000060351,ENSMUST00000169913,NM_173767,uc009jii.2_5end | |association_with_transcript=173bp_to_ENSMUST00000060351,ENSMUST00000169913,NM_173767,uc009jii.2_5end | ||
|cluster_id=chr7:121889453..121889464,+ | |||
|description=CAGE_peak_7_at_Insc_5end | |description=CAGE_peak_7_at_Insc_5end | ||
|id=chr7:121889453..121889464,+ | |id=chr7:121889453..121889464,+ | ||
|ontology_enrichment_celltype=CL:0000107!6.72e-12!9;CL:0000221!3.98e-09!44;CL:0000133!3.98e-09!44;CL:0002319!2.20e-08!43;CL:0000540!2.34e-08!33;CL:0000047!2.34e-08!33;CL:0000031!2.34e-08!33;CL:0000404!2.34e-08!33 | |ontology_enrichment_celltype=CL:0000107!6.72e-12!9;CL:0000221!3.98e-09!44;CL:0000133!3.98e-09!44;CL:0002319!2.20e-08!43;CL:0000540!2.34e-08!33;CL:0000047!2.34e-08!33;CL:0000031!2.34e-08!33;CL:0000404!2.34e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.79e-57,9;CL:0000540,6.01e-15,33;CL:0000047,6.01e-15,33;CL:0000031,6.01e-15,33;CL:0000404,6.01e-15,33;CL:0000221,1.44e-13,44;CL:0000133,1.44e-13,44;CL:0000393,1.67e-12,39;CL:0000211,1.67e-12,39;CL:0002319,2.99e-11,43;CL:0002321,4.24e-08,70;CL:0000710,1.53e-07,1;CL:0002077,1.53e-07,1;CL:0005014,1.53e-07,1;CL:0002315,1.53e-07,1;CL:0002490,1.53e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.13e-13!102;UBERON:0000924!2.13e-13!102;UBERON:0006601!2.13e-13!102;UBERON:0000073!2.19e-13!75;UBERON:0001016!2.19e-13!75;UBERON:0000010!2.67e-13!11;UBERON:0001017!3.46e-12!73;UBERON:0005743!3.46e-12!73;UBERON:0002410!6.72e-12!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.79e-57,9;UBERON:0000010,1.74e-46,11;UBERON:0000011,2.57e-20,3;UBERON:0000013,3.45e-20,3;UBERON:0010313,1.72e-19,3;UBERON:0002342,1.72e-19,3;UBERON:0002005,1.72e-19,3;UBERON:0005428,1.72e-19,3;UBERON:0005062,1.72e-19,3;UBERON:0001896,3.01e-13,2;UBERON:0002298,3.01e-13,2;UBERON:0005290,3.01e-13,2;UBERON:0010096,3.01e-13,2;UBERON:0001017,2.85e-11,73;UBERON:0001016,6.20e-11,75;UBERON:0004121,5.98e-10,95;UBERON:0000924,5.98e-10,95;UBERON:0006601,5.98e-10,95 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0.662605622854841,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.279182999001381,0.56276261003168,0.61119299110724,0.589257170947335,0.569486723196412,0,0.227178579999552,0.831287161174641,0,0,0.679971333707751,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0.323533699894818,0.441683036920787,0,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0.457500602818626,0,0,0,0.83115217823824,0.648965052271031,0,0.622034853050465,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0.213288250535234,0,0.38660238396628,0,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.64096361229084,0,0,3.47059041357882,1.17131623288992,3.87762115919038,5.25731355495614,5.12436950389506,2.26461224631066,4.04810701674894,3.79932615284705,4.74345333535828,0.963963949265421,0,0,0.325773918707152,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0.565879024158229,0.280924522409647,0.256100609619477,0.17230640686684,0.476293691283074,0,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0,0,0.355905054372522,0.29551344712669,0.818462086339379,0,0.385813221962283,0.749431733813838,0.701794825336225,0,0.191288332068843,1.10295709559758,0 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0.662605622854841,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.279182999001381,0.56276261003168,0.61119299110724,0.589257170947335,0.569486723196412,0,0.227178579999552,0.831287161174641,0,0,0.679971333707751,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0.323533699894818,0.441683036920787,0,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0.457500602818626,0,0,0,0.83115217823824,0.648965052271031,0,0.622034853050465,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0.213288250535234,0,0.38660238396628,0,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.64096361229084,0,0,3.47059041357882,1.17131623288992,3.87762115919038,5.25731355495614,5.12436950389506,2.26461224631066,4.04810701674894,3.79932615284705,4.74345333535828,0.963963949265421,0,0,0.325773918707152,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0.565879024158229,0.280924522409647,0.256100609619477,0.17230640686684,0.476293691283074,0,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0,0,0.355905054372522,0.29551344712669,0.818462086339379,0,0.385813221962283,0.749431733813838,0.701794825336225,0,0.191288332068843,1.10295709559758,0 | ||
|short_description=p7@Insc | |short_description=p7@Insc | ||
}} | }} |
Latest revision as of 18:32, 25 September 2015
Short description: | p7@Insc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Insc_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 173bp_to_ENSMUST00000060351, ENSMUST00000169913, NM_173767, uc009jii.2_5end |
EntrezGene: | Insc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.79e-57 | 9 |
neuron | 6.01e-15 | 33 |
neuronal stem cell | 6.01e-15 | 33 |
neuroblast | 6.01e-15 | 33 |
electrically signaling cell | 6.01e-15 | 33 |
ectodermal cell | 1.44e-13 | 44 |
neurectodermal cell | 1.44e-13 | 44 |
electrically responsive cell | 1.67e-12 | 39 |
electrically active cell | 1.67e-12 | 39 |
neural cell | 2.99e-11 | 43 |
embryonic cell | 4.24e-08 | 70 |
neurecto-epithelial cell | 1.53e-07 | 1 |
ecto-epithelial cell | 1.53e-07 | 1 |
auditory epithelial support cell | 1.53e-07 | 1 |
supporting cell of cochlea | 1.53e-07 | 1 |
organ of Corti supporting cell | 1.53e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.79e-57 | 9 |
peripheral nervous system | 1.74e-46 | 11 |
parasympathetic nervous system | 2.57e-20 | 3 |
sympathetic nervous system | 3.45e-20 | 3 |
neural crest-derived structure | 1.72e-19 | 3 |
neural crest | 1.72e-19 | 3 |
enteric nervous system | 1.72e-19 | 3 |
vagal neural crest | 1.72e-19 | 3 |
neural fold | 1.72e-19 | 3 |
medulla oblongata | 3.01e-13 | 2 |
brainstem | 3.01e-13 | 2 |
myelencephalon | 3.01e-13 | 2 |
future myelencephalon | 3.01e-13 | 2 |
central nervous system | 2.85e-11 | 73 |
nervous system | 6.20e-11 | 75 |
ectoderm-derived structure | 5.98e-10 | 95 |
ectoderm | 5.98e-10 | 95 |
presumptive ectoderm | 5.98e-10 | 95 |