FFCP PHASE1:Mm9::chr14:20796325..20796348,-: Difference between revisions
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{{FFCP|EntrezGene=14702|HGNC=|MCL_coexpression_id=22|UniProt=P63213|association_with_transcript=-44bp_to_ENSMUST00000159028_5end|description=CAGE_peak_6_at_Gng2_5end|id=chr14:20796325..20796348,-|ontology_enrichment_celltype=CL:0000117!4.80e-18!23;CL:0000337!4.80e-18!23;CL:0000540!3.97e-13!33;CL:0000047!3.97e-13!33;CL:0000031!3.97e-13!33;CL:0000404!3.97e-13!33;CL:0000393!4.80e-11!39;CL:0000211!4.80e-11!39;CL:0002319!1.43e-08!43;CL:0000221!3.87e-08!44;CL:0000133!3.87e-08!44;CL:0000055!4.09e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.45e-27,23;CL:0000337,8.45e-27,23;CL:0000540,1.12e-16,33;CL:0000047,1.12e-16,33;CL:0000031,1.12e-16,33;CL:0000404,1.12e-16,33;CL:0000393,3.91e-13,39;CL:0000211,3.91e-13,39;CL:0002319,2.44e-11,43;CL:0000221,6.07e-11,44;CL:0000133,6.07e-11,44;CL:0002609,2.23e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.75e-17!34;UBERON:0000073!2.61e-14!75;UBERON:0001016!2.61e-14!75;UBERON:0001017!4.09e-14!73;UBERON:0005743!4.09e-14!73;UBERON:0001049!4.20e-14!52;UBERON:0005068!4.20e-14!52;UBERON:0006241!4.20e-14!52;UBERON:0007135!4.20e-14!52;UBERON:0002791!1.36e-13!29;UBERON:0003528!1.36e-13!29;UBERON:0001893!1.36e-13!29;UBERON:0003080!4.75e-13!40;UBERON:0003056!5.16e-13!49;UBERON:0002346!8.14e-13!71;UBERON:0003075!8.14e-13!71;UBERON:0007284!8.14e-13!71;UBERON:0002780!1.57e-12!39;UBERON:0001890!1.57e-12!39;UBERON:0006240!1.57e-12!39;UBERON:0000955!3.43e-12!50;UBERON:0006238!3.43e-12!50;UBERON:0002616!9.00e-12!49;UBERON:0000033!1.86e-11!63;UBERON:0004121!2.12e-10!102;UBERON:0000924!2.12e-10!102;UBERON:0006601!2.12e-10!102;UBERON:0000956!1.32e-08!21;UBERON:0001869!1.32e-08!21;UBERON:0000203!1.32e-08!21;UBERON:0007811!9.73e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.48e-22,34;UBERON:0000073,1.06e-16,54;UBERON:0003528,1.38e-15,29;UBERON:0002791,1.38e-15,29;UBERON:0001893,1.38e-15,29;UBERON:0001049,4.86e-14,52;UBERON:0005068,4.86e-14,52;UBERON:0006241,4.86e-14,52;UBERON:0007135,4.86e-14,52;UBERON:0001017,1.23e-13,73;UBERON:0001016,4.96e-13,75;UBERON:0003080,4.76e-12,40;UBERON:0002346,8.91e-12,64;UBERON:0003075,8.91e-12,64;UBERON:0007284,8.91e-12,64;UBERON:0000956,1.20e-11,21;UBERON:0001869,1.20e-11,21;UBERON:0000203,1.20e-11,21;UBERON:0002780,2.73e-11,39;UBERON:0001890,2.73e-11,39;UBERON:0006240,2.73e-11,39;UBERON:0003056,1.33e-10,49;UBERON:0004121,8.03e-10,95;UBERON:0000924,8.03e-10,95;UBERON:0006601,8.03e-10,95;UBERON:0002616,1.05e-09,46;UBERON:0000955,2.24e-09,47;UBERON:0006238,2.24e-09,47;UBERON:0010371,2.26e-09,73;UBERON:0001948,1.72e-08,5;UBERON:0002315,1.72e-08,5;UBERON:0002619,3.92e-07,17;UBERON:0002240,5.87e-07,6;UBERON:0005174,5.87e-07,6;UBERON:0001137,5.87e-07,6|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,5.46254444320914,5.81890077199236,8.87363964908651,0.338844532069132,0,0.449949858640699,0,0,0,0,6.63613518774257,8.6403800532282,9.67494822216357,2.28520787523043,4.19650227808066,8.57435594504678,6.80502844229478,7.35375029288017,1.10115880999389,1.0214987046815,1.53606533256243,12.265424758908,11.0700048758916,14.5855743755893,0.837548997004143,1.68828783009504,0.763991238884051,5.59794312399969,7.26095572075425,9.13357284543973,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,0.915001205637253,8.79580464790051,1.91206752211504,1.79000820131231,0.20778804455956,1.29793010454206,0.203678727700633,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,1.02054748726992,0.768682321709099,1.21812241927647,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.26173969138476,19.6547809644433,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0.345369963731791,0,0,0.54390568381871,0,0,0,0.234423373184406,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.258717367565509,0.643011105094777,0,0,0.493647061806363,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0.165458490457098,0.388902376688095,0.258319646955462,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.302899349844443,0.228620419965,0.100826185136841,0,0.192423683280659,0,0,0.221985953374065,0,0.167884616364078,0,0.187682475451182,0,0,0,1.6942555278512,1.38097570952153,2.29158205375759,2.57779773515531,0,2.2661816921691,0.675022500231806,0,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,0.853668028770671,0.729320151204882,2.72497111416377,1.83843508450014,1.11123363900808,1.85431551515005,0.64183841918363,2.02157769411038,1.77435509923168,1.69763707247469,1.77918864192777,1.6646539625266,1.26358031702349,1.90517476513229,1.85414921511769,2.50781986602817,2.88460130562315,2.06078488188156,2.05721551431249,0.532427418478012,2.38436189947321,1.16277133305863,1.78807822789128,1.26921911837515,1.09756783723664,1.8414879800649,1.62964936615034,3.36685362994643,1.42362021749009,1.37906275325789,0.409231043169689,1.70430525304563,0.964533054905707,2.74791635731741,1.63752125911786,1.50409737833809,0.382576664137687,0.220591419119515,0|short_description=p6@Gng2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14702 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=P63213 | |||
|association_with_transcript=-44bp_to_ENSMUST00000159028_5end | |||
|cluster_id=chr14:20796325..20796348,- | |||
|description=CAGE_peak_6_at_Gng2_5end | |||
|id=chr14:20796325..20796348,- | |||
|ontology_enrichment_celltype=CL:0000117!4.80e-18!23;CL:0000337!4.80e-18!23;CL:0000540!3.97e-13!33;CL:0000047!3.97e-13!33;CL:0000031!3.97e-13!33;CL:0000404!3.97e-13!33;CL:0000393!4.80e-11!39;CL:0000211!4.80e-11!39;CL:0002319!1.43e-08!43;CL:0000221!3.87e-08!44;CL:0000133!3.87e-08!44;CL:0000055!4.09e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.45e-27,23;CL:0000337,8.45e-27,23;CL:0000540,1.12e-16,33;CL:0000047,1.12e-16,33;CL:0000031,1.12e-16,33;CL:0000404,1.12e-16,33;CL:0000393,3.91e-13,39;CL:0000211,3.91e-13,39;CL:0002319,2.44e-11,43;CL:0000221,6.07e-11,44;CL:0000133,6.07e-11,44;CL:0002609,2.23e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.75e-17!34;UBERON:0000073!2.61e-14!75;UBERON:0001016!2.61e-14!75;UBERON:0001017!4.09e-14!73;UBERON:0005743!4.09e-14!73;UBERON:0001049!4.20e-14!52;UBERON:0005068!4.20e-14!52;UBERON:0006241!4.20e-14!52;UBERON:0007135!4.20e-14!52;UBERON:0002791!1.36e-13!29;UBERON:0003528!1.36e-13!29;UBERON:0001893!1.36e-13!29;UBERON:0003080!4.75e-13!40;UBERON:0003056!5.16e-13!49;UBERON:0002346!8.14e-13!71;UBERON:0003075!8.14e-13!71;UBERON:0007284!8.14e-13!71;UBERON:0002780!1.57e-12!39;UBERON:0001890!1.57e-12!39;UBERON:0006240!1.57e-12!39;UBERON:0000955!3.43e-12!50;UBERON:0006238!3.43e-12!50;UBERON:0002616!9.00e-12!49;UBERON:0000033!1.86e-11!63;UBERON:0004121!2.12e-10!102;UBERON:0000924!2.12e-10!102;UBERON:0006601!2.12e-10!102;UBERON:0000956!1.32e-08!21;UBERON:0001869!1.32e-08!21;UBERON:0000203!1.32e-08!21;UBERON:0007811!9.73e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.48e-22,34;UBERON:0000073,1.06e-16,54;UBERON:0003528,1.38e-15,29;UBERON:0002791,1.38e-15,29;UBERON:0001893,1.38e-15,29;UBERON:0001049,4.86e-14,52;UBERON:0005068,4.86e-14,52;UBERON:0006241,4.86e-14,52;UBERON:0007135,4.86e-14,52;UBERON:0001017,1.23e-13,73;UBERON:0001016,4.96e-13,75;UBERON:0003080,4.76e-12,40;UBERON:0002346,8.91e-12,64;UBERON:0003075,8.91e-12,64;UBERON:0007284,8.91e-12,64;UBERON:0000956,1.20e-11,21;UBERON:0001869,1.20e-11,21;UBERON:0000203,1.20e-11,21;UBERON:0002780,2.73e-11,39;UBERON:0001890,2.73e-11,39;UBERON:0006240,2.73e-11,39;UBERON:0003056,1.33e-10,49;UBERON:0004121,8.03e-10,95;UBERON:0000924,8.03e-10,95;UBERON:0006601,8.03e-10,95;UBERON:0002616,1.05e-09,46;UBERON:0000955,2.24e-09,47;UBERON:0006238,2.24e-09,47;UBERON:0010371,2.26e-09,73;UBERON:0001948,1.72e-08,5;UBERON:0002315,1.72e-08,5;UBERON:0002619,3.92e-07,17;UBERON:0002240,5.87e-07,6;UBERON:0005174,5.87e-07,6;UBERON:0001137,5.87e-07,6 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,5.46254444320914,5.81890077199236,8.87363964908651,0.338844532069132,0,0.449949858640699,0,0,0,0,6.63613518774257,8.6403800532282,9.67494822216357,2.28520787523043,4.19650227808066,8.57435594504678,6.80502844229478,7.35375029288017,1.10115880999389,1.0214987046815,1.53606533256243,12.265424758908,11.0700048758916,14.5855743755893,0.837548997004143,1.68828783009504,0.763991238884051,5.59794312399969,7.26095572075425,9.13357284543973,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,0.915001205637253,8.79580464790051,1.91206752211504,1.79000820131231,0.20778804455956,1.29793010454206,0.203678727700633,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,1.02054748726992,0.768682321709099,1.21812241927647,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.26173969138476,19.6547809644433,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0.345369963731791,0,0,0.54390568381871,0,0,0,0.234423373184406,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.258717367565509,0.643011105094777,0,0,0.493647061806363,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0.165458490457098,0.388902376688095,0.258319646955462,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.302899349844443,0.228620419965,0.100826185136841,0,0.192423683280659,0,0,0.221985953374065,0,0.167884616364078,0,0.187682475451182,0,0,0,1.6942555278512,1.38097570952153,2.29158205375759,2.57779773515531,0,2.2661816921691,0.675022500231806,0,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,0.853668028770671,0.729320151204882,2.72497111416377,1.83843508450014,1.11123363900808,1.85431551515005,0.64183841918363,2.02157769411038,1.77435509923168,1.69763707247469,1.77918864192777,1.6646539625266,1.26358031702349,1.90517476513229,1.85414921511769,2.50781986602817,2.88460130562315,2.06078488188156,2.05721551431249,0.532427418478012,2.38436189947321,1.16277133305863,1.78807822789128,1.26921911837515,1.09756783723664,1.8414879800649,1.62964936615034,3.36685362994643,1.42362021749009,1.37906275325789,0.409231043169689,1.70430525304563,0.964533054905707,2.74791635731741,1.63752125911786,1.50409737833809,0.382576664137687,0.220591419119515,0 | |||
|short_description=p6@Gng2 | |||
}} |
Latest revision as of 18:25, 25 September 2015
Short description: | p6@Gng2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gng2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -44bp_to_ENSMUST00000159028_5end |
EntrezGene: | Gng2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.45e-27 | 23 |
neuroblast (sensu Vertebrata) | 8.45e-27 | 23 |
neuron | 1.12e-16 | 33 |
neuronal stem cell | 1.12e-16 | 33 |
neuroblast | 1.12e-16 | 33 |
electrically signaling cell | 1.12e-16 | 33 |
electrically responsive cell | 3.91e-13 | 39 |
electrically active cell | 3.91e-13 | 39 |
neural cell | 2.44e-11 | 43 |
ectodermal cell | 6.07e-11 | 44 |
neurectodermal cell | 6.07e-11 | 44 |
neuron of cerebral cortex | 2.23e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
gray matter | 6.48e-22 | 34 |
regional part of nervous system | 1.06e-16 | 54 |
brain grey matter | 1.38e-15 | 29 |
regional part of telencephalon | 1.38e-15 | 29 |
telencephalon | 1.38e-15 | 29 |
neural tube | 4.86e-14 | 52 |
neural rod | 4.86e-14 | 52 |
future spinal cord | 4.86e-14 | 52 |
neural keel | 4.86e-14 | 52 |
central nervous system | 1.23e-13 | 73 |
nervous system | 4.96e-13 | 75 |
anterior neural tube | 4.76e-12 | 40 |
neurectoderm | 8.91e-12 | 64 |
neural plate | 8.91e-12 | 64 |
presumptive neural plate | 8.91e-12 | 64 |
cerebral cortex | 1.20e-11 | 21 |
cerebral hemisphere | 1.20e-11 | 21 |
pallium | 1.20e-11 | 21 |
regional part of forebrain | 2.73e-11 | 39 |
forebrain | 2.73e-11 | 39 |
future forebrain | 2.73e-11 | 39 |
pre-chordal neural plate | 1.33e-10 | 49 |
ectoderm-derived structure | 8.03e-10 | 95 |
ectoderm | 8.03e-10 | 95 |
presumptive ectoderm | 8.03e-10 | 95 |
regional part of brain | 1.05e-09 | 46 |
brain | 2.24e-09 | 47 |
future brain | 2.24e-09 | 47 |
ecto-epithelium | 2.26e-09 | 73 |
regional part of spinal cord | 1.72e-08 | 5 |
gray matter of spinal cord | 1.72e-08 | 5 |
regional part of cerebral cortex | 3.92e-07 | 17 |
spinal cord | 5.87e-07 | 6 |
dorsal region element | 5.87e-07 | 6 |
dorsum | 5.87e-07 | 6 |