FFCP PHASE1:Mm9::chr8:73895532..73895543,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77090 | |EntrezGene=77090 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |MCL_coexpression_id=87 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z3P1 | |UniProt=D3Z3P1 | ||
|association_with_transcript=287bp_to_ENSMUST00000110052_5end | |association_with_transcript=287bp_to_ENSMUST00000110052_5end | ||
|cluster_id=chr8:73895532..73895543,+ | |||
|description=CAGE_peak_3_at_Ocel1_5end | |description=CAGE_peak_3_at_Ocel1_5end | ||
|id=chr8:73895532..73895543,+ | |id=chr8:73895532..73895543,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.99e-21!23;CL:0000337!6.99e-21!23;CL:0000540!5.95e-15!33;CL:0000047!5.95e-15!33;CL:0000031!5.95e-15!33;CL:0000404!5.95e-15!33;CL:0000393!2.24e-12!39;CL:0000211!2.24e-12!39;CL:0002319!1.49e-11!43;CL:0000221!4.21e-11!44;CL:0000133!4.21e-11!44;CL:0000055!1.51e-09!50;CL:0002609!4.65e-08!6 | |ontology_enrichment_celltype=CL:0000117!6.99e-21!23;CL:0000337!6.99e-21!23;CL:0000540!5.95e-15!33;CL:0000047!5.95e-15!33;CL:0000031!5.95e-15!33;CL:0000404!5.95e-15!33;CL:0000393!2.24e-12!39;CL:0000211!2.24e-12!39;CL:0002319!1.49e-11!43;CL:0000221!4.21e-11!44;CL:0000133!4.21e-11!44;CL:0000055!1.51e-09!50;CL:0002609!4.65e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-39,23;CL:0000337,1.92e-39,23;CL:0000540,4.94e-27,33;CL:0000047,4.94e-27,33;CL:0000031,4.94e-27,33;CL:0000404,4.94e-27,33;CL:0000393,1.24e-22,39;CL:0000211,1.24e-22,39;CL:0002319,2.23e-20,43;CL:0000221,7.06e-20,44;CL:0000133,7.06e-20,44;CL:0000120,1.77e-17,3;CL:0002612,2.95e-17,3;CL:0002609,8.40e-15,6;CL:0002611,1.20e-12,2;CL:0002321,7.23e-12,70;CL:0000723,1.02e-08,91;CL:0000048,1.02e-08,91;CL:0002608,2.37e-08,3;CL:0000034,4.60e-08,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.16e-25!34;UBERON:0002791!1.58e-19!29;UBERON:0003528!1.58e-19!29;UBERON:0001893!1.58e-19!29;UBERON:0000073!2.04e-18!75;UBERON:0001016!2.04e-18!75;UBERON:0001049!2.04e-18!52;UBERON:0005068!2.04e-18!52;UBERON:0006241!2.04e-18!52;UBERON:0007135!2.04e-18!52;UBERON:0001017!2.57e-18!73;UBERON:0005743!2.57e-18!73;UBERON:0002346!1.37e-16!71;UBERON:0003075!1.37e-16!71;UBERON:0007284!1.37e-16!71;UBERON:0000956!1.04e-15!21;UBERON:0001869!1.04e-15!21;UBERON:0000203!1.04e-15!21;UBERON:0000955!1.11e-15!50;UBERON:0006238!1.11e-15!50;UBERON:0003080!4.28e-15!40;UBERON:0002616!6.01e-15!49;UBERON:0002780!1.42e-14!39;UBERON:0001890!1.42e-14!39;UBERON:0006240!1.42e-14!39;UBERON:0004121!4.97e-14!102;UBERON:0000924!4.97e-14!102;UBERON:0006601!4.97e-14!102;UBERON:0003056!1.82e-13!49;UBERON:0000033!9.11e-13!63;UBERON:0002619!5.54e-12!17;UBERON:0007811!4.45e-10!86;UBERON:0000153!1.42e-09!94;UBERON:0002021!5.63e-09!10;UBERON:0000411!5.63e-09!10;UBERON:0001950!5.63e-09!10;UBERON:0001948!2.34e-07!5;UBERON:0002315!2.34e-07!5 | |ontology_enrichment_uberon=UBERON:0002020!2.16e-25!34;UBERON:0002791!1.58e-19!29;UBERON:0003528!1.58e-19!29;UBERON:0001893!1.58e-19!29;UBERON:0000073!2.04e-18!75;UBERON:0001016!2.04e-18!75;UBERON:0001049!2.04e-18!52;UBERON:0005068!2.04e-18!52;UBERON:0006241!2.04e-18!52;UBERON:0007135!2.04e-18!52;UBERON:0001017!2.57e-18!73;UBERON:0005743!2.57e-18!73;UBERON:0002346!1.37e-16!71;UBERON:0003075!1.37e-16!71;UBERON:0007284!1.37e-16!71;UBERON:0000956!1.04e-15!21;UBERON:0001869!1.04e-15!21;UBERON:0000203!1.04e-15!21;UBERON:0000955!1.11e-15!50;UBERON:0006238!1.11e-15!50;UBERON:0003080!4.28e-15!40;UBERON:0002616!6.01e-15!49;UBERON:0002780!1.42e-14!39;UBERON:0001890!1.42e-14!39;UBERON:0006240!1.42e-14!39;UBERON:0004121!4.97e-14!102;UBERON:0000924!4.97e-14!102;UBERON:0006601!4.97e-14!102;UBERON:0003056!1.82e-13!49;UBERON:0000033!9.11e-13!63;UBERON:0002619!5.54e-12!17;UBERON:0007811!4.45e-10!86;UBERON:0000153!1.42e-09!94;UBERON:0002021!5.63e-09!10;UBERON:0000411!5.63e-09!10;UBERON:0001950!5.63e-09!10;UBERON:0001948!2.34e-07!5;UBERON:0002315!2.34e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,3.18e-28,5;UBERON:0002315,3.18e-28,5;UBERON:0002020,7.14e-26,34;UBERON:0002240,1.58e-23,6;UBERON:0005174,1.58e-23,6;UBERON:0001137,1.58e-23,6;UBERON:0001017,1.09e-17,73;UBERON:0002257,2.95e-17,3;UBERON:0001016,3.61e-17,75;UBERON:0001049,2.33e-16,52;UBERON:0005068,2.33e-16,52;UBERON:0006241,2.33e-16,52;UBERON:0007135,2.33e-16,52;UBERON:0000073,1.08e-15,54;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0002346,5.64e-13,64;UBERON:0003075,5.64e-13,64;UBERON:0007284,5.64e-13,64;UBERON:0002256,1.20e-12,2;UBERON:0003076,9.62e-12,12;UBERON:0003057,9.62e-12,12;UBERON:0003528,3.10e-11,29;UBERON:0002791,3.10e-11,29;UBERON:0001893,3.10e-11,29;UBERON:0010371,3.67e-11,73;UBERON:0000956,5.30e-09,21;UBERON:0001869,5.30e-09,21;UBERON:0000203,5.30e-09,21;UBERON:0010314,1.73e-08,92;UBERON:0002780,3.95e-08,39;UBERON:0001890,3.95e-08,39;UBERON:0006240,3.95e-08,39;UBERON:0003080,6.64e-08,40;UBERON:0002616,9.36e-07,46 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0,0,1.24427534770173,0.945041568321835,1.05162480675691,2.85650984403804,3.09215957332259,0.857435594504678,1.15014565221884,2.75765635983006,0,0.510749352340751,0.153606533256243,0.923204014111357,0.640413505216868,3.12548022334056,0.279182999001381,0,0.30559649555362,1.17851434189467,1.13897344639282,4.28718725398191,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,1.00523481690292,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.281105173679186,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.720332286654991,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,1.3748254587495,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0.399024873401031,0,0,0.209613162627982,0,0.44449345560323,0,0,0.252697211763798,0,0.377252682772152,0,0,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.29551344712669,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.500895729946347,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0,0,1.24427534770173,0.945041568321835,1.05162480675691,2.85650984403804,3.09215957332259,0.857435594504678,1.15014565221884,2.75765635983006,0,0.510749352340751,0.153606533256243,0.923204014111357,0.640413505216868,3.12548022334056,0.279182999001381,0,0.30559649555362,1.17851434189467,1.13897344639282,4.28718725398191,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,1.00523481690292,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.281105173679186,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.720332286654991,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,1.3748254587495,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0.399024873401031,0,0,0.209613162627982,0,0.44449345560323,0,0,0.252697211763798,0,0.377252682772152,0,0,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.29551344712669,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p3@Ocel1 | |short_description=p3@Ocel1 | ||
}} | }} |
Latest revision as of 18:10, 25 September 2015
Short description: | p3@Ocel1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ocel1_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 287bp_to_ENSMUST00000110052_5end |
EntrezGene: | Ocel1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.92e-39 | 23 |
neuroblast (sensu Vertebrata) | 1.92e-39 | 23 |
neuron | 4.94e-27 | 33 |
neuronal stem cell | 4.94e-27 | 33 |
neuroblast | 4.94e-27 | 33 |
electrically signaling cell | 4.94e-27 | 33 |
electrically responsive cell | 1.24e-22 | 39 |
electrically active cell | 1.24e-22 | 39 |
neural cell | 2.23e-20 | 43 |
ectodermal cell | 7.06e-20 | 44 |
neurectodermal cell | 7.06e-20 | 44 |
granule cell | 1.77e-17 | 3 |
neuron of the ventral spinal cord | 2.95e-17 | 3 |
neuron of cerebral cortex | 8.40e-15 | 6 |
neuron of the dorsal spinal cord | 1.20e-12 | 2 |
embryonic cell | 7.23e-12 | 70 |
somatic stem cell | 1.02e-08 | 91 |
multi fate stem cell | 1.02e-08 | 91 |
hippocampal neuron | 2.37e-08 | 3 |
stem cell | 4.60e-08 | 97 |