FFCP PHASE1:Mm9::chr7:119570539..119570552,+: Difference between revisions
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|id=chr7:119570539..119570552,+
|short_description=p7@Parva
|description=CAGE_peak_7_at_Parva_5end
|association_with_transcript=-466bp_to_ENSMUST00000106643,uc009jg...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=57342 | |EntrezGene=57342 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=Q9EPC1 | |UniProt=Q9EPC1 | ||
|association_with_transcript=-466bp_to_ENSMUST00000106643,uc009jgs.1_5end | |||
|cluster_id=chr7:119570539..119570552,+ | |||
|description=CAGE_peak_7_at_Parva_5end | |||
|id=chr7:119570539..119570552,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.38e-28,3;CL:0002202,7.38e-28,3;CL:0000069,7.38e-28,3;CL:0002632,7.38e-28,3;CL:0002368,7.38e-28,3;CL:0000307,7.38e-28,3;CL:0000377,7.38e-28,3;CL:0000349,9.50e-13,3;CL:0000351,9.50e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!1.00e-07!9;UBERON:0003134!9.84e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.38e-28,3;UBERON:0001005,7.38e-28,3;UBERON:0007196,7.38e-28,3;UBERON:0001558,7.38e-28,3;UBERON:0000358,9.50e-13,3;UBERON:0000307,9.50e-13,3;UBERON:0007010,9.50e-13,3;UBERON:0006554,6.15e-08,18;UBERON:0001008,1.55e-07,19;UBERON:0003103,2.84e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839918529752175,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,1.69422266034566,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,3.030874574157,6.08063677140237,2.52762222507392,0,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0,0,0,0,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0,1.1270773567308,0.203651327845314,1.16371492300575,0.140271639780637,0.316182685621286,0,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0.824850614862677,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.709360934569094,0.356737635204141,0.329098041204242,0,0.938686832254841,1.0591603543191,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0.352071715937262,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,1.88399098879899,1.34307693091263,0.19318959403219,0.563047426353546,0.915758121336325,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839918529752175,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,1.69422266034566,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,3.030874574157,6.08063677140237,2.52762222507392,0,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0,0,0,0,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0,1.1270773567308,0.203651327845314,1.16371492300575,0.140271639780637,0.316182685621286,0,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0.824850614862677,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.709360934569094,0.356737635204141,0.329098041204242,0,0.938686832254841,1.0591603543191,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0.352071715937262,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,1.88399098879899,1.34307693091263,0.19318959403219,0.563047426353546,0.915758121336325,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p7@Parva | |||
}} | }} |
Latest revision as of 18:04, 25 September 2015
Short description: | p7@Parva |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Parva_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | -466bp_to_ENSMUST00000106643, uc009jgs.1_5end |
EntrezGene: | Parva |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.38e-28 | 3 |
epithelial cell of tracheobronchial tree | 7.38e-28 | 3 |
branched duct epithelial cell | 7.38e-28 | 3 |
epithelial cell of lower respiratory tract | 7.38e-28 | 3 |
respiratory epithelial cell | 7.38e-28 | 3 |
tracheal epithelial cell | 7.38e-28 | 3 |
tracheoblast | 7.38e-28 | 3 |
extraembryonic cell | 9.50e-13 | 3 |
trophoblast cell | 9.50e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 7.38e-28 | 3 |
respiratory airway | 7.38e-28 | 3 |
tracheobronchial tree | 7.38e-28 | 3 |
lower respiratory tract | 7.38e-28 | 3 |
blastocyst | 9.50e-13 | 3 |
blastula | 9.50e-13 | 3 |
cleaving embryo | 9.50e-13 | 3 |
urinary system structure | 6.15e-08 | 18 |
renal system | 1.55e-07 | 19 |
compound organ | 2.84e-07 | 43 |