FFCP PHASE1:Mm9::chr11:78138215..78138264,+: Difference between revisions
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{{FFCP|EntrezGene=11676|HGNC=|MCL_coexpression_id=607|UniProt=|association_with_transcript=-302bp_to_ENSMUST00000124090_5end|description=CAGE_peak_5_at_Aldoc_5end|id=chr11:78138215..78138264,+|ontology_enrichment_celltype=CL:0000117!4.84e-14!23;CL:0000337!4.84e-14!23;CL:0000221!6.42e-13!44;CL:0000133!6.42e-13!44;CL:0002319!1.61e-12!43;CL:0000055!2.19e-10!50;CL:0000540!8.48e-09!33;CL:0000047!8.48e-09!33;CL:0000031!8.48e-09!33;CL:0000404!8.48e-09!33;CL:0000393!2.70e-07!39;CL:0000211!2.70e-07!39|ontology_enrichment_celltype_v019_2=CL:0002319,6.30e-13,43;CL:0000221,1.57e-12,44;CL:0000133,1.57e-12,44;CL:0002453,2.04e-12,8;CL:0000117,3.43e-10,23;CL:0000337,3.43e-10,23;CL:0000333,1.03e-09,10;CL:0000095,1.03e-09,10;CL:0000243,1.03e-09,10;CL:0000123,1.03e-09,10;CL:0000125,1.03e-09,10;CL:0000030,1.03e-09,10;CL:0000339,1.03e-09,10;CL:0000128,2.48e-09,6;CL:0000126,2.48e-09,6;CL:0000127,2.48e-09,6;CL:0002614,6.49e-08,3;CL:0002610,9.29e-08,3;CL:0002612,4.56e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.67e-29!73;UBERON:0005743!6.67e-29!73;UBERON:0001049!5.05e-28!52;UBERON:0005068!5.05e-28!52;UBERON:0006241!5.05e-28!52;UBERON:0007135!5.05e-28!52;UBERON:0000073!1.26e-27!75;UBERON:0001016!1.26e-27!75;UBERON:0002020!3.00e-27!34;UBERON:0000955!9.51e-26!50;UBERON:0006238!9.51e-26!50;UBERON:0002616!6.75e-25!49;UBERON:0000033!1.79e-22!63;UBERON:0002791!6.24e-22!29;UBERON:0003528!6.24e-22!29;UBERON:0001893!6.24e-22!29;UBERON:0004121!1.71e-20!102;UBERON:0000924!1.71e-20!102;UBERON:0006601!1.71e-20!102;UBERON:0002346!4.10e-20!71;UBERON:0003075!4.10e-20!71;UBERON:0007284!4.10e-20!71;UBERON:0000956!5.35e-18!21;UBERON:0001869!5.35e-18!21;UBERON:0000203!5.35e-18!21;UBERON:0003080!1.26e-17!40;UBERON:0002780!9.69e-17!39;UBERON:0001890!9.69e-17!39;UBERON:0006240!9.69e-17!39;UBERON:0003056!3.62e-16!49;UBERON:0002619!3.92e-15!17;UBERON:0007811!6.55e-14!86;UBERON:0000153!3.50e-12!94;UBERON:0003076!2.03e-11!12;UBERON:0003057!2.03e-11!12;UBERON:0002021!4.45e-10!10;UBERON:0000411!4.45e-10!10;UBERON:0001950!4.45e-10!10;UBERON:0000025!1.16e-09!114;UBERON:0004111!1.48e-08!122;UBERON:0002298!8.05e-08!6;UBERON:0002240!1.21e-07!6;UBERON:0005174!1.21e-07!6;UBERON:0001137!1.21e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.02e-43,54;UBERON:0001017,8.76e-43,73;UBERON:0001016,2.03e-41,75;UBERON:0001049,4.23e-39,52;UBERON:0005068,4.23e-39,52;UBERON:0006241,4.23e-39,52;UBERON:0007135,4.23e-39,52;UBERON:0004121,6.41e-31,95;UBERON:0000924,6.41e-31,95;UBERON:0006601,6.41e-31,95;UBERON:0002020,7.88e-31,34;UBERON:0002346,2.58e-30,64;UBERON:0003075,2.58e-30,64;UBERON:0007284,2.58e-30,64;UBERON:0000955,1.60e-29,47;UBERON:0006238,1.60e-29,47;UBERON:0002616,4.71e-28,46;UBERON:0010371,1.28e-25,73;UBERON:0003076,6.01e-22,12;UBERON:0003057,6.01e-22,12;UBERON:0003528,1.14e-21,29;UBERON:0002791,1.14e-21,29;UBERON:0001893,1.14e-21,29;UBERON:0002619,1.03e-20,17;UBERON:0003080,2.74e-20,40;UBERON:0002780,8.34e-19,39;UBERON:0001890,8.34e-19,39;UBERON:0006240,8.34e-19,39;UBERON:0010314,1.00e-18,92;UBERON:0002021,1.18e-18,10;UBERON:0000411,1.18e-18,10;UBERON:0001950,1.18e-18,10;UBERON:0000956,1.45e-18,21;UBERON:0001869,1.45e-18,21;UBERON:0000203,1.45e-18,21;UBERON:0003056,1.43e-15,49;UBERON:0002240,8.92e-14,6;UBERON:0005174,8.92e-14,6;UBERON:0001137,8.92e-14,6;UBERON:0000025,1.29e-13,114;UBERON:0004111,3.24e-12,122;UBERON:0001948,1.38e-11,5;UBERON:0002315,1.38e-11,5;UBERON:0011216,1.03e-10,194;UBERON:0004733,7.55e-10,6;UBERON:0004732,7.55e-10,6;UBERON:0002028,7.55e-10,6;UBERON:0007277,7.55e-10,6;UBERON:0002950,9.47e-10,4;UBERON:0001891,9.47e-10,4;UBERON:0009616,9.47e-10,4;UBERON:0010286,9.47e-10,4;UBERON:0002038,6.49e-08,3;UBERON:0009663,6.49e-08,3;UBERON:0009661,6.49e-08,3;UBERON:0000125,6.49e-08,3;UBERON:0002308,6.49e-08,3;UBERON:0004684,9.29e-08,3;UBERON:0002275,9.29e-08,3;UBERON:0002257,4.56e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3373081317832,7.46933021297204,11.4713640453827,3.77963338388479,4.31257693094915,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,0,0,0,1.19840044207362,2.68952813725088,0.518448061542388,0.810035629990144,0.841299845405528,19.9955689082663,21.2033799313549,0.122490799214954,0.287536413054709,0.919218786610021,9.91042928994498,8.17198963745201,10.1380311949121,0.131886287730194,0.182975287204819,0,17.0301629390842,9.56696437053856,8.25110537994775,8.2496003932627,9.25415925194169,1.1183966749518,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85561594023094,6.91174132484402,0,0,0,0,5.54225365797844,1.37250180845588,0.125654352112864,1.21677024134594,1.27857728665165,4.98691306942944,5.51620294430376,0,0,0.505445516867349,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,2.10289948564127,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0,13.6468001489623,16.7612711826851,0,0,0,0,0,0,0,0,0,0.584511715822624,0,1.28528526568723,0,0,0.162886959353576,0,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1320012749143,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,4.14292712856459,3.43737308063638,3.43706364687375,6.85082519770642,3.0215755895588,2.70009000092722,2.70192721934532,4.98456649882625,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.765153328275374,0,0.231867835620421|short_description=p5@Aldoc}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11676 | |||
|HGNC= | |||
|MCL_coexpression_id=607 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-302bp_to_ENSMUST00000124090_5end | |||
|cluster_id=chr11:78138215..78138264,+ | |||
|description=CAGE_peak_5_at_Aldoc_5end | |||
|id=chr11:78138215..78138264,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.84e-14!23;CL:0000337!4.84e-14!23;CL:0000221!6.42e-13!44;CL:0000133!6.42e-13!44;CL:0002319!1.61e-12!43;CL:0000055!2.19e-10!50;CL:0000540!8.48e-09!33;CL:0000047!8.48e-09!33;CL:0000031!8.48e-09!33;CL:0000404!8.48e-09!33;CL:0000393!2.70e-07!39;CL:0000211!2.70e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.30e-13,43;CL:0000221,1.57e-12,44;CL:0000133,1.57e-12,44;CL:0002453,2.04e-12,8;CL:0000117,3.43e-10,23;CL:0000337,3.43e-10,23;CL:0000333,1.03e-09,10;CL:0000095,1.03e-09,10;CL:0000243,1.03e-09,10;CL:0000123,1.03e-09,10;CL:0000125,1.03e-09,10;CL:0000030,1.03e-09,10;CL:0000339,1.03e-09,10;CL:0000128,2.48e-09,6;CL:0000126,2.48e-09,6;CL:0000127,2.48e-09,6;CL:0002614,6.49e-08,3;CL:0002610,9.29e-08,3;CL:0002612,4.56e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.67e-29!73;UBERON:0005743!6.67e-29!73;UBERON:0001049!5.05e-28!52;UBERON:0005068!5.05e-28!52;UBERON:0006241!5.05e-28!52;UBERON:0007135!5.05e-28!52;UBERON:0000073!1.26e-27!75;UBERON:0001016!1.26e-27!75;UBERON:0002020!3.00e-27!34;UBERON:0000955!9.51e-26!50;UBERON:0006238!9.51e-26!50;UBERON:0002616!6.75e-25!49;UBERON:0000033!1.79e-22!63;UBERON:0002791!6.24e-22!29;UBERON:0003528!6.24e-22!29;UBERON:0001893!6.24e-22!29;UBERON:0004121!1.71e-20!102;UBERON:0000924!1.71e-20!102;UBERON:0006601!1.71e-20!102;UBERON:0002346!4.10e-20!71;UBERON:0003075!4.10e-20!71;UBERON:0007284!4.10e-20!71;UBERON:0000956!5.35e-18!21;UBERON:0001869!5.35e-18!21;UBERON:0000203!5.35e-18!21;UBERON:0003080!1.26e-17!40;UBERON:0002780!9.69e-17!39;UBERON:0001890!9.69e-17!39;UBERON:0006240!9.69e-17!39;UBERON:0003056!3.62e-16!49;UBERON:0002619!3.92e-15!17;UBERON:0007811!6.55e-14!86;UBERON:0000153!3.50e-12!94;UBERON:0003076!2.03e-11!12;UBERON:0003057!2.03e-11!12;UBERON:0002021!4.45e-10!10;UBERON:0000411!4.45e-10!10;UBERON:0001950!4.45e-10!10;UBERON:0000025!1.16e-09!114;UBERON:0004111!1.48e-08!122;UBERON:0002298!8.05e-08!6;UBERON:0002240!1.21e-07!6;UBERON:0005174!1.21e-07!6;UBERON:0001137!1.21e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.02e-43,54;UBERON:0001017,8.76e-43,73;UBERON:0001016,2.03e-41,75;UBERON:0001049,4.23e-39,52;UBERON:0005068,4.23e-39,52;UBERON:0006241,4.23e-39,52;UBERON:0007135,4.23e-39,52;UBERON:0004121,6.41e-31,95;UBERON:0000924,6.41e-31,95;UBERON:0006601,6.41e-31,95;UBERON:0002020,7.88e-31,34;UBERON:0002346,2.58e-30,64;UBERON:0003075,2.58e-30,64;UBERON:0007284,2.58e-30,64;UBERON:0000955,1.60e-29,47;UBERON:0006238,1.60e-29,47;UBERON:0002616,4.71e-28,46;UBERON:0010371,1.28e-25,73;UBERON:0003076,6.01e-22,12;UBERON:0003057,6.01e-22,12;UBERON:0003528,1.14e-21,29;UBERON:0002791,1.14e-21,29;UBERON:0001893,1.14e-21,29;UBERON:0002619,1.03e-20,17;UBERON:0003080,2.74e-20,40;UBERON:0002780,8.34e-19,39;UBERON:0001890,8.34e-19,39;UBERON:0006240,8.34e-19,39;UBERON:0010314,1.00e-18,92;UBERON:0002021,1.18e-18,10;UBERON:0000411,1.18e-18,10;UBERON:0001950,1.18e-18,10;UBERON:0000956,1.45e-18,21;UBERON:0001869,1.45e-18,21;UBERON:0000203,1.45e-18,21;UBERON:0003056,1.43e-15,49;UBERON:0002240,8.92e-14,6;UBERON:0005174,8.92e-14,6;UBERON:0001137,8.92e-14,6;UBERON:0000025,1.29e-13,114;UBERON:0004111,3.24e-12,122;UBERON:0001948,1.38e-11,5;UBERON:0002315,1.38e-11,5;UBERON:0011216,1.03e-10,194;UBERON:0004733,7.55e-10,6;UBERON:0004732,7.55e-10,6;UBERON:0002028,7.55e-10,6;UBERON:0007277,7.55e-10,6;UBERON:0002950,9.47e-10,4;UBERON:0001891,9.47e-10,4;UBERON:0009616,9.47e-10,4;UBERON:0010286,9.47e-10,4;UBERON:0002038,6.49e-08,3;UBERON:0009663,6.49e-08,3;UBERON:0009661,6.49e-08,3;UBERON:0000125,6.49e-08,3;UBERON:0002308,6.49e-08,3;UBERON:0004684,9.29e-08,3;UBERON:0002275,9.29e-08,3;UBERON:0002257,4.56e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3373081317832,7.46933021297204,11.4713640453827,3.77963338388479,4.31257693094915,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,0,0,0,1.19840044207362,2.68952813725088,0.518448061542388,0.810035629990144,0.841299845405528,19.9955689082663,21.2033799313549,0.122490799214954,0.287536413054709,0.919218786610021,9.91042928994498,8.17198963745201,10.1380311949121,0.131886287730194,0.182975287204819,0,17.0301629390842,9.56696437053856,8.25110537994775,8.2496003932627,9.25415925194169,1.1183966749518,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85561594023094,6.91174132484402,0,0,0,0,5.54225365797844,1.37250180845588,0.125654352112864,1.21677024134594,1.27857728665165,4.98691306942944,5.51620294430376,0,0,0.505445516867349,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,2.10289948564127,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0,13.6468001489623,16.7612711826851,0,0,0,0,0,0,0,0,0,0.584511715822624,0,1.28528526568723,0,0,0.162886959353576,0,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1320012749143,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,4.14292712856459,3.43737308063638,3.43706364687375,6.85082519770642,3.0215755895588,2.70009000092722,2.70192721934532,4.98456649882625,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.765153328275374,0,0.231867835620421 | |||
|short_description=p5@Aldoc | |||
}} |
Latest revision as of 17:56, 25 September 2015
Short description: | p5@Aldoc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Aldoc_5end |
Coexpression cluster: | MCL_coexpression_mm9:607 |
Association with transcript: | -302bp_to_ENSMUST00000124090_5end |
EntrezGene: | Aldoc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.30e-13 | 43 |
ectodermal cell | 1.57e-12 | 44 |
neurectodermal cell | 1.57e-12 | 44 |
oligodendrocyte precursor cell | 2.04e-12 | 8 |
CNS neuron (sensu Vertebrata) | 3.43e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.43e-10 | 23 |
migratory neural crest cell | 1.03e-09 | 10 |
neuron associated cell | 1.03e-09 | 10 |
glial cell (sensu Vertebrata) | 1.03e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.03e-09 | 10 |
glial cell | 1.03e-09 | 10 |
glioblast | 1.03e-09 | 10 |
glioblast (sensu Vertebrata) | 1.03e-09 | 10 |
oligodendrocyte | 2.48e-09 | 6 |
macroglial cell | 2.48e-09 | 6 |
astrocyte | 2.48e-09 | 6 |
neuron of the substantia nigra | 6.49e-08 | 3 |
raphe nuclei neuron | 9.29e-08 | 3 |
neuron of the ventral spinal cord | 4.56e-07 | 3 |