FFCP PHASE1:Mm9::chr2:130102933..130102937,+: Difference between revisions
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{{FFCP|EntrezGene=67134|HGNC=|UniProt=F6V095|association_with_transcript=-16bp_to_ENSMUST00000150401_5end|description=CAGE_peak_3_at_Nop56_5end|id=chr2:130102933..130102937,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.25e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.35e-12,6;UBERON:0004457,7.35e-12,6;UBERON:0000042,7.35e-12,6;UBERON:0004854,7.35e-12,6;UBERON:0009034,7.35e-12,6;UBERON:0002095,7.35e-12,6;UBERON:0004782,7.35e-12,6;UBERON:0003281,7.35e-12,6;UBERON:0009664,7.35e-12,6;UBERON:0002296,7.35e-12,6;UBERON:0005602,7.35e-12,6;UBERON:0001179,7.35e-12,6;UBERON:0006293,7.35e-12,6;UBERON:0004177,1.32e-10,29;UBERON:0005057,1.32e-10,29;UBERON:0000077,1.45e-08,35;UBERON:0002390,6.05e-08,45;UBERON:0003061,6.05e-08,45;UBERON:0002075,1.13e-07,19;UBERON:0002193,2.37e-07,48;UBERON:0002405,2.37e-07,48;UBERON:0003887,3.69e-07,10|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0.703943610758334,0,0.513653904676515,0.717949430958028,0.171200729931206,0.0874204024189974,0,1.21485160433896,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0.992909512008853,1.04479915655574,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,0,0,1.27006134691926,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.479227355091182,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0.294628585473668,0,0,0.302904773332736,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0.452167921657868,0,0,0,0,0,0.485300549842228,0,0,0,0,0,0,0.11981512450592,0,0.635351135365324,0,0,0.125654352112864,0,0,0,0.162241263067758,0.203678727700633,0.248813941220186,0,0,0.520481771850815,0.689706313300419,0.180062129805349,0,0.340182495756639,0.512454881139399,0,0,0.646703978798527,0.378212160335639,0.527853372491847,0.876782929710299,0.556094498451196,0.348252166522167,0.205782136407943,0,0.702213187313235,0.257347907114715,0.284163499395593,0.207125772535502,0.703578179943289,0.36012412292203,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0.853153002140936,0.464473343720877,0.902072229254653,0.80673409849337,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,1.79763881730844,0.216138049874694,0.199141273254367,0.189667900953082,0.913988100877831,1.1270773567308,0.814605311381257,0.193952487167626,0.140271639780637,0,0,0.156998727841375,0,0,0.333690211432188,0.393117990226406,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,0.287696137450811,0,0,5.75072826109418,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.325929952884052,1.18821560042632,0.469380496577004,0.167506257441816,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,1.14754461763673,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0.283880170416537,0.178065603667255,0,0,0,1.21390318077491,0.906970670894253,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.517434735131018,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0.291480836629851,0,0.170870880797853,0.206386867963223,1.11116716421827,1.13021074202815,2.1871076435364,1.60144721244566,0.679913719975421,0.279902904647316,0.276399947608848,0,1.26534397432454,0.203319467126849,0.432021363287205,0,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0.2604087696879,0.209718688851422,0,0.288030006257865,0.316011120628178,1.01362607645082,1.43795340030758,1.94881234466693,0.537080087002444,0.79472541912506,0.600977247599844,1.03382669022204,0.908698049533329,0.685861259894999,1.10908803650525,0.38983152295901,0.384847366561318,0.116876902181569,0,0,0.62799699626633,0.671538465456314,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.726511433089237,0.399024873401031,0,0.972426868273176,0.628839487883947,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p3@Nop56}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67134 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=F6V095 | |||
|association_with_transcript=-16bp_to_ENSMUST00000150401_5end | |||
|cluster_id=chr2:130102933..130102937,+ | |||
|description=CAGE_peak_3_at_Nop56_5end | |||
|id=chr2:130102933..130102937,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.25e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.35e-12,6;UBERON:0004457,7.35e-12,6;UBERON:0000042,7.35e-12,6;UBERON:0004854,7.35e-12,6;UBERON:0009034,7.35e-12,6;UBERON:0002095,7.35e-12,6;UBERON:0004782,7.35e-12,6;UBERON:0003281,7.35e-12,6;UBERON:0009664,7.35e-12,6;UBERON:0002296,7.35e-12,6;UBERON:0005602,7.35e-12,6;UBERON:0001179,7.35e-12,6;UBERON:0006293,7.35e-12,6;UBERON:0004177,1.32e-10,29;UBERON:0005057,1.32e-10,29;UBERON:0000077,1.45e-08,35;UBERON:0002390,6.05e-08,45;UBERON:0003061,6.05e-08,45;UBERON:0002075,1.13e-07,19;UBERON:0002193,2.37e-07,48;UBERON:0002405,2.37e-07,48;UBERON:0003887,3.69e-07,10 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0.703943610758334,0,0.513653904676515,0.717949430958028,0.171200729931206,0.0874204024189974,0,1.21485160433896,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0.992909512008853,1.04479915655574,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,0,0,1.27006134691926,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.479227355091182,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0.294628585473668,0,0,0.302904773332736,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0.452167921657868,0,0,0,0,0,0.485300549842228,0,0,0,0,0,0,0.11981512450592,0,0.635351135365324,0,0,0.125654352112864,0,0,0,0.162241263067758,0.203678727700633,0.248813941220186,0,0,0.520481771850815,0.689706313300419,0.180062129805349,0,0.340182495756639,0.512454881139399,0,0,0.646703978798527,0.378212160335639,0.527853372491847,0.876782929710299,0.556094498451196,0.348252166522167,0.205782136407943,0,0.702213187313235,0.257347907114715,0.284163499395593,0.207125772535502,0.703578179943289,0.36012412292203,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0.853153002140936,0.464473343720877,0.902072229254653,0.80673409849337,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,1.79763881730844,0.216138049874694,0.199141273254367,0.189667900953082,0.913988100877831,1.1270773567308,0.814605311381257,0.193952487167626,0.140271639780637,0,0,0.156998727841375,0,0,0.333690211432188,0.393117990226406,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,0.287696137450811,0,0,5.75072826109418,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.325929952884052,1.18821560042632,0.469380496577004,0.167506257441816,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,1.14754461763673,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0.283880170416537,0.178065603667255,0,0,0,1.21390318077491,0.906970670894253,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.517434735131018,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0.291480836629851,0,0.170870880797853,0.206386867963223,1.11116716421827,1.13021074202815,2.1871076435364,1.60144721244566,0.679913719975421,0.279902904647316,0.276399947608848,0,1.26534397432454,0.203319467126849,0.432021363287205,0,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0.2604087696879,0.209718688851422,0,0.288030006257865,0.316011120628178,1.01362607645082,1.43795340030758,1.94881234466693,0.537080087002444,0.79472541912506,0.600977247599844,1.03382669022204,0.908698049533329,0.685861259894999,1.10908803650525,0.38983152295901,0.384847366561318,0.116876902181569,0,0,0.62799699626633,0.671538465456314,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.726511433089237,0.399024873401031,0,0.972426868273176,0.628839487883947,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p3@Nop56 | |||
}} |
Latest revision as of 17:39, 25 September 2015
Short description: | p3@Nop56 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nop56_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENSMUST00000150401_5end |
EntrezGene: | Nop56 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 7.35e-12 | 6 |
cavity lining | 7.35e-12 | 6 |
serous membrane | 7.35e-12 | 6 |
gastrointestinal system mesentery | 7.35e-12 | 6 |
stomach region | 7.35e-12 | 6 |
mesentery | 7.35e-12 | 6 |
gastrointestinal system serosa | 7.35e-12 | 6 |
mesentery of stomach | 7.35e-12 | 6 |
gut mesentery | 7.35e-12 | 6 |
dorsal mesentery | 7.35e-12 | 6 |
dorsal mesogastrium | 7.35e-12 | 6 |
peritoneal cavity | 7.35e-12 | 6 |
spleen primordium | 7.35e-12 | 6 |
hemopoietic organ | 1.32e-10 | 29 |
immune organ | 1.32e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.45e-08 | 35 |
hematopoietic system | 6.05e-08 | 45 |
blood island | 6.05e-08 | 45 |
viscus | 1.13e-07 | 19 |
hemolymphoid system | 2.37e-07 | 48 |
immune system | 2.37e-07 | 48 |
intraembryonic coelom | 3.69e-07 | 10 |