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FFCP PHASE1:Mm9::chr5:144861222..144861252,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=231876
|EntrezGene=231876
|HGNC=
|HGNC=
|MCL_coexpression_id=240
|TSSclassifier=NA
|UniProt=Q3TYD6
|UniProt=Q3TYD6
|association_with_transcript=-52bp_to_ENSMUST00000041804,NM_001081109,uc009alg.1_5end
|association_with_transcript=-52bp_to_ENSMUST00000041804,NM_001081109,uc009alg.1_5end
|cluster_id=chr5:144861222..144861252,+
|description=CAGE_peak_1_at_Lmtk2_5end
|description=CAGE_peak_1_at_Lmtk2_5end
|id=chr5:144861222..144861252,+
|id=chr5:144861222..144861252,+
|ontology_enrichment_celltype=CL:0000117!6.19e-09!23;CL:0000337!6.19e-09!23;CL:0000540!1.06e-07!33;CL:0000047!1.06e-07!33;CL:0000031!1.06e-07!33;CL:0000404!1.06e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.19e-09,23;CL:0000337,6.19e-09,23;CL:0000540,1.06e-07,33;CL:0000047,1.06e-07,33;CL:0000031,1.06e-07,33;CL:0000404,1.06e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!2.44e-14!34;UBERON:0001017!1.07e-13!73;UBERON:0005743!1.07e-13!73;UBERON:0001049!2.36e-13!52;UBERON:0005068!2.36e-13!52;UBERON:0006241!2.36e-13!52;UBERON:0007135!2.36e-13!52;UBERON:0000955!8.61e-13!50;UBERON:0006238!8.61e-13!50;UBERON:0000073!2.06e-12!75;UBERON:0001016!2.06e-12!75;UBERON:0002616!2.83e-12!49;UBERON:0002791!4.00e-12!29;UBERON:0003528!4.00e-12!29;UBERON:0001893!4.00e-12!29;UBERON:0000064!5.50e-12!99;UBERON:0007023!2.30e-10!51;UBERON:0003080!2.49e-10!40;UBERON:0000033!3.07e-10!63;UBERON:0004121!4.03e-10!102;UBERON:0000924!4.03e-10!102;UBERON:0006601!4.03e-10!102;UBERON:0002780!6.73e-10!39;UBERON:0001890!6.73e-10!39;UBERON:0006240!6.73e-10!39;UBERON:0000956!4.52e-09!21;UBERON:0001869!4.52e-09!21;UBERON:0000203!4.52e-09!21;UBERON:0003056!1.92e-08!49;UBERON:0002346!2.60e-08!71;UBERON:0003075!2.60e-08!71;UBERON:0007284!2.60e-08!71;UBERON:0002619!4.84e-08!17;UBERON:0002021!1.15e-07!10;UBERON:0000411!1.15e-07!10;UBERON:0001950!1.15e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.86e-14,54;UBERON:0002020,2.44e-14,34;UBERON:0001017,1.07e-13,73;UBERON:0001049,2.36e-13,52;UBERON:0005068,2.36e-13,52;UBERON:0006241,2.36e-13,52;UBERON:0007135,2.36e-13,52;UBERON:0004121,1.45e-12,95;UBERON:0000924,1.45e-12,95;UBERON:0006601,1.45e-12,95;UBERON:0001016,2.06e-12,75;UBERON:0003528,4.00e-12,29;UBERON:0002791,4.00e-12,29;UBERON:0001893,4.00e-12,29;UBERON:0000955,2.69e-11,47;UBERON:0006238,2.69e-11,47;UBERON:0002346,4.75e-11,64;UBERON:0003075,4.75e-11,64;UBERON:0007284,4.75e-11,64;UBERON:0002616,8.47e-11,46;UBERON:0010371,9.74e-11,73;UBERON:0007023,2.30e-10,51;UBERON:0003080,2.49e-10,40;UBERON:0002780,6.73e-10,39;UBERON:0001890,6.73e-10,39;UBERON:0006240,6.73e-10,39;UBERON:0011216,1.34e-09,194;UBERON:0000956,4.52e-09,21;UBERON:0001869,4.52e-09,21;UBERON:0000203,4.52e-09,21;UBERON:0003056,1.92e-08,49;UBERON:0002619,4.84e-08,17;UBERON:0002021,1.15e-07,10;UBERON:0000411,1.15e-07,10;UBERON:0001950,1.15e-07,10;UBERON:0000160,1.57e-07,31
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.9815934572443,20.7444435558869,19.9599232649535,23.4735814259954,24.0815466625307,41.9952513465409,35.4163408459548,31.0031116276305,11.9613236835183,7.61109056102649,12.444876054019,16.790777052105,15.20605129417,13.1440107283244,15.8849349509619,21.9156029849736,25.6079168075566,31.1072406758495,24.0168451677415,8.31173382689673,8.21687657318618,8.31493267057888,15.2172691317359,21.2589049615953,15.7456038871159,15.5074003533306,17.0633300412369,16.91791107741,18.5520180651787,23.1949756160611,19.8196393779079,23.3753804363138,41.0381994343533,36.1837103999725,33.9118377983818,30.7228847946264,24.1486992540238,20.4573898241788,22.8939530334081,25.2954687313298,24.0754609936974,104.479090884157,89.3030958823923,86.5072225293489,102.08079031215,115.093863321468,136.726295427536,109.353645037553,115.2822280254,114.19188706402,128.922317626203,4.35906859853542,18.3551441764474,15.3660245178721,15.0726164582342,8.80375283037526,11.9498280492509,21.1134391411534,18.1310850370227,17.329637317958,17.1834103999382,17.7435509923168,19.6171395041519,16.4809053146993,17.7989923685537,19.4706239759529,25.719859329286,19.236798106846,16.3972837394149,20.6042950401653,20.4606498986812,17.1434626192708,18.4574838405711,19.7902037656276,11.482366913954,18.2572198005741,16.9229215783353,17.5610853957862,13.41655528333,18.4693594830372,18.5176949647054,20.8797631898546,18.1248247571037,18.0061658994663,13.9443157067369,19.097754487133,22.982573170291,17.778802241851,17.1896843238639,12.4337415844748,15.4413993383661,13.6802023016049
|phase1_expression=11.2104192973356,223.69323629683,237.964602200727,253.76747328643,248.945177783335,84.6111530435925,80.3627483648608,23.6295681898085,29.143265485395,30.6624529481811,15.923271044972,17.6296471379693,19.174481752295,20.3689537636264,30.3129883252253,23.28465574983,28.682037003254,27.4452083861667,33.044578498983,29.2828859740641,44.0524242982541,4.86525660884338,4.4403964153619,69.9166887607187,57.3523202667925,169.398429413931,122.336406909177,109.243914971746,68.598454423751,66.2839241268618,51.8849394933413,13.3356441426523,21.52726756546,0,24.5523876788583,14.1299448554718,20.8252743387616,66.9650609179052,32.8160844699996,48.1641844455894,88.8229546926832,80.5993672250966,75.2541047198288,12.4637849795822,11.2528393653661,10.0950713688925,14.0830441982647,16.7879370412944,22.6276768216506,27.414615769474,12.738764367908,21.5628846547457,41.7778689083764,40.6202799526353,43.0200062902354,12.0911934936895,12.8940047972441,17.532851137433,45.1165707716903,46.0222151966669,57.6786577190623,16.9422266034566,18.6751907183339,3.1496490104849,8.89979726310277,7.104801149461,11.6844043102178,13.0634223809329,31.1068836925433,32.6714370762691,34.2829687002753,66.84233035049,58.5301633521776,33.5624789848974,33.0666875012915,25.7381260250806,71.5753226496027,73.5479067370681,70.5053987646157,45.2369966914565,40.6205137594699,38.5475894212002,59.7451617862955,48.3975844627245,62.0360885973849,59.8096028511545,51.8232918108735,43.6174703231203,12.5705480933086,11.260162455911,50.4364210340919,17.2084775396277,20.3991400112325,15.1116893658589,18.1937396885347,21.5052905806721,24.9991067834518,4.60161870960756,3.63700406444016,5.65343319216544,14.084341977668,10.2661181931454,20.3844191765317,21.3320010945999,26.4119070033681,25.8427062784601,26.2872711407687,32.8849573590893,21.4918443427153,24.0476265285016,12.4909435271618,9.74289530598852,12.4532368518272,10.399862198131,15.4041206347773,20.6093209780668,60.0683771594529,21.5453041810668,31.8459798701955,13.2648816956876,18.9923705875938,17.455509112868,31.6865994070808,49.1871738979399,48.801082687535,49.3032116552581,10.9031763300387,5.99902730993408,10.2926883929182,58.268558728476,94.245124180637,41.2146274930195,101.165754351905,93.3361419255706,51.94701113989,51.2682391294114,13.6464747559424,17.416975885413,9.85618757891331,47.5598594303431,12.2313216384941,13.104419952708,21.4273934468366,13.7141384230501,20.547022743701,21.3949912875699,23.0506242416933,27.1638539275966,13.5807835547691,17.3977593754394,14.0760899331159,9.86380795924087,8.89751197521913,22.984642990463,12.7584924572925,13.5343301436575,4.91549231119264,9.77922047035918,10.7982129770325,13.2560494422721,10.3191466391682,13.6847166710371,12.7842157216014,16.9217239302767,12.1871019181029,12.3242990717716,15.0233104783787,14.0118410840603,14.3167069424728,16.5809138719886,25.4556061973987,20.6141982269719,16.0271584162467,23.0835040267839,57.829735855135,37.6630881308181,145.384264512871,78.2773677324091,12.1574302805083,11.3795969211615,19.330119198314,24.6053900040478,26.6853652613844,28.5338439168839,59.3161326930639,34.9161784014903,35.1869292320377,31.0372096384195,34.118715245846,48.536248067328,51.0085797704278,52.9715786856617,16.5011073829181,15.0808036644842,13.5249282807697,17.1067115390064,15.9041039477453,22.0927832654503,33.4521281387321,39.707129806513,33.911725213737,39.8572839467416,16.8977997439675,19.520877368783,16.9040735797355,17.9889689907883,24.3432145666204,19.7765270996982,15.2775511068852,20.4264257590076,15.7271169971784,11.2570179407113,8.62609239164127,8.93138274404408,12.1694692514679,12.1237861414614,12.19902411949,12.0610880340842,31.5927955184894,10.9905018826881,15.9705676913185,9.84521497496091,16.6630076284836,17.7556632888325,30.2315423925237,30.4408490658166,22.5418256071853,19.710357378741,24.237124835938,29.0038067046856,31.0832967358612,36.8855099382855,15.0791283939272,6.52686820582452,46.2258416637894,31.7327258250442,51.3761887960934,52.510835593307,7.21313759657372,23.4797962300067,19.2460013843917,17.9601822376454,28.6513118984623,27.4814117645435,27.8498342602993,29.7230357328274,21.8597778904443,29.2255857911312,29.2512955680427,76.4744733083901,16.890870139784,12.1084610493734,15.3113741792362,21.2811458634571,35.84118735179,16.0235219862288,17.5347663039556,18.483297816078,26.8724722521503,24.2873766875703,26.1012576099903,18.5402202033528,12.1209108650805,24.3348303610578,29.5172104009997,28.8779521094923,33.0226417581174,14.0447653344422,13.712020480972,16.289614662401,21.8128487379996,19.6205699362278,18.7585883486418,20.0946866415636,24.8752010547533,45.1202310939937,16.0985730580122,35.4505443824182,15.339120536111,25.5726801695381,27.8137561527308,33.3206026482474,48.9687805538149,57.6672689252685,27.3393409276564,16.0981757011314,13.1488114432495,19.2135826144785,27.065457088763,21.7339264546196,15.298058699447,13.7152423277185,14.6491972232689,16.2294005062569,13.7606157207794,16.8755157715284,15.9847904416266,17.9815934572443,20.7444435558869,19.9599232649535,23.4735814259954,24.0815466625307,41.9952513465409,35.4163408459548,31.0031116276305,11.9613236835183,7.61109056102649,12.444876054019,16.790777052105,15.20605129417,13.1440107283244,15.8849349509619,21.9156029849736,25.6079168075566,31.1072406758495,24.0168451677415,8.31173382689673,8.21687657318618,8.31493267057888,15.2172691317359,21.2589049615953,15.7456038871159,15.5074003533306,17.0633300412369,16.91791107741,18.5520180651787,23.1949756160611,19.8196393779079,23.3753804363138,41.0381994343533,36.1837103999725,33.9118377983818,30.7228847946264,24.1486992540238,20.4573898241788,22.8939530334081,25.2954687313298,24.0754609936974,104.479090884157,89.3030958823923,86.5072225293489,102.08079031215,115.093863321468,136.726295427536,109.353645037553,115.2822280254,114.19188706402,128.922317626203,4.35906859853542,18.3551441764474,15.3660245178721,15.0726164582342,8.80375283037526,11.9498280492509,21.1134391411534,18.1310850370227,17.329637317958,17.1834103999382,17.7435509923168,19.6171395041519,16.4809053146993,17.7989923685537,19.4706239759529,25.719859329286,19.236798106846,16.3972837394149,20.6042950401653,20.4606498986812,17.1434626192708,18.4574838405711,19.7902037656276,11.482366913954,18.2572198005741,16.9229215783353,17.5610853957862,13.41655528333,18.4693594830372,18.5176949647054,20.8797631898546,18.1248247571037,18.0061658994663,13.9443157067369,19.097754487133,22.982573170291,17.778802241851,17.1896843238639,12.4337415844748,15.4413993383661,13.6802023016049
|short_description=p1@Lmtk2
|short_description=p1@Lmtk2
}}
}}

Latest revision as of 17:09, 25 September 2015

Short description:p1@Lmtk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lmtk2_5end
Coexpression cluster:MCL_coexpression_mm9:240
Association with transcript: -52bp_to_ENSMUST00000041804, NM_001081109, uc009alg.1_5end
EntrezGene:Lmtk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lmtk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5223.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6237.96
CD326+ enterocyte, pool1.CNhs13542.11848-124I3253.77
CD326+ enterocyte, pool2.CNhs13197.11849-124I4248.95
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I784.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I880.36
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E923.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E729.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F230.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E615.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.37
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A130.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A528.68
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A433.04
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.28
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A344.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D169.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D257.35
GP2+ M cell, pool1.CNhs13228.11845-124H9169.40
GP2+ M cell, pool2.CNhs13231.11846-124I1122.34
GP2+ M cell, pool3.CNhs13240.11847-124I2109.24
Ileum epithelium, pool1.CNhs13199.10252-104B968.60
Ileum epithelium, pool2.CNhs13232.10253-104C166.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C851.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G621.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F524.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G866.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H132.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H348.16
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G988.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H280.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H475.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.25
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.79
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B822.63
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.41
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A241.78
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I940.62
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A143.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.53
Mouse Granule cells, donor1.CNhs12131.11713-123C345.12
Mouse Granule cells, donor2.CNhs12357.11731-123E346.02
Mouse Granule cells, donor3.CNhs12108.11636-122C757.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.94
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C811.68
Mouse Microglia, donor2.CNhs12634.11736-123E813.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D531.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F532.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D934.28
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F166.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D558.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D233.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F233.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D371.58
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F373.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D770.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D445.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F440.62
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D838.55
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E459.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E548.40
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I662.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D659.81
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F651.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E143.62
Mouse Schwann, donor1.CNhs12507.11728-123D912.57
Mouse Schwann, donor2.CNhs12573.11746-123F911.26
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G350.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C420.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.11
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G126.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G225.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G326.29
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B632.88
accessory axillary lymph node, adult.CNhs10475.1063-29H921.49
adrenal gland, adult.CNhs10508.49-24D724.05
adrenal gland, embryo E14.CNhs11038.406-44C512.49
adrenal gland, embryo E16.CNhs11004.1254-43D69.74
adrenal gland, embryo E17.CNhs11043.1263-45I112.45
adrenal gland, embryo E18.CNhs11026.1262-18F510.40
adrenal gland, neonate N00.CNhs11191.1311-23C115.40
adrenal gland, neonate N25.CNhs11223.1377-27I320.61
amnion, adult pregnant day17.5.CNhs10488.583-22A860.07
aorta, adult.CNhs10498.46-23H121.55
bone (os femoris), adult.CNhs10483.56-12G231.85
bone (os femoris), neonate N02.CNhs11227.1985-43F513.26
bone (os femoris), neonate N16.CNhs11225.1525-43A618.99
bone (os femoris), neonate N20.CNhs11195.1350-25C317.46
cecum, adult.CNhs10467.37-13H431.69
cerebellum, adult.CNhs10494.15-8B249.19
cerebellum, neonate N30.CNhs11135.1395-42I248.80
colon, adult.CNhs10468.36-18H749.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.90
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.29
corpora quadrigemina, adult.CNhs10501.16-22A458.27
corpus striatum, adult.CNhs10487.19-21D894.25
corpus striatum, neonate N00.CNhs11226.630-43F141.21
cortex, adult.CNhs10473.12-14D5101.17
cortex, neonate N30.CNhs11107.1392-42F293.34
diencephalon, adult.CNhs10482.20-12F251.95
diencephalon, neonate N30.CNhs11201.1388-42B251.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.42
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G447.56
eyeball, embryo E12.CNhs11016.345-16C612.23
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C921.43
eyeball, embryo E17.CNhs11023.1261-18D413.71
eyeball, neonate N00.CNhs11207.633-15C620.55
eyeball, neonate N01.CNhs11140.1532-43E721.39
eyeball, neonate N02.CNhs11205.1551-44G823.05
eyeball, neonate N16.CNhs11188.777-19A227.16
forelimb, embryo E11.CNhs10596.335-25E213.58
forelimb, embryo E12.CNhs10600.359-14H217.40
forelimb, embryo E13.CNhs10589.384-1E214.08
forelimb, embryo E14.CNhs10577.413-26A89.86
forelimb, embryo E15.CNhs11007.437-20E78.90
forelimb, embryo E17.CNhs10598.1517-43C422.98
forelimb, embryo E18.CNhs11008.1520-43B512.76
gonad, embryo E13.CNhs11044.1564-45I613.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.78
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.80
heart, embryo E11.CNhs10586.331-24E913.26
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I913.68
heart, embryo E14.CNhs10597.403-26D412.78
heart, embryo E15.CNhs11017.431-16C816.92
heart, embryo E16.CNhs11021.457-17C612.19
heart, embryo E17.CNhs11025.479-18E512.32
heart, embryo E18.CNhs11030.1283-20G315.02
heart, neonate N00.CNhs11213.639-21E314.01
heart, neonate N03.CNhs11221.1349-25I214.32
heart, neonate N10.CNhs11118.749-24G116.58
heart, neonate N16.CNhs11209.782-15G125.46
heart, neonate N20.CNhs11127.821-26I620.61
heart, neonate N25.CNhs11196.1351-25D316.03
heart, neonate N30.CNhs11202.1390-42D223.08
hippocampus, adult.CNhs10478.13-16E857.83
hippocampus, neonate N00.CNhs11228.627-43G137.66
intestinal mucosa, adult.CNhs10506.860-29I3145.38
intestine, adult.CNhs10496.178-9A378.28
intestine, embryo E12.CNhs11019.1251-16I512.16
intestine, embryo E13.CNhs11010.381-16D511.38
intestine, embryo E15.CNhs10602.976-16D819.33
intestine, embryo E16.CNhs10585.463-22H424.61
intestine, embryo E17.CNhs10582.482-18D326.69
intestine, embryo E18.CNhs10526.1289-20F728.53
intestine, neonate N00.CNhs11126.644-26D159.32
intestine, neonate N01.CNhs11192.1322-23E934.92
intestine, neonate N06.CNhs11102.688-20B835.19
intestine, neonate N07.CNhs11095.720-20F231.04
intestine, neonate N10.CNhs11098.755-23A534.12
intestine, neonate N20.CNhs11187.827-18D148.54
intestine, neonate N25.CNhs11121.1352-25E351.01
intestine, neonate N30.CNhs11131.1384-42G152.97
kidney, embryo E14.CNhs10606.411-4I916.50
kidney, embryo E15.CNhs10997.434-16F815.08
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I217.11
kidney, embryo E18.CNhs11001.1288-20C715.90
kidney, neonate N00.CNhs11214.646-21G722.09
kidney, neonate N10.CNhs11206.758-6D533.45
kidney, neonate N20.CNhs11113.832-19I139.71
kidney, neonate N25.CNhs11122.1353-25F333.91
kidney, neonate N30.CNhs11203.1385-42H139.86
liver, adult pregnant day01.CNhs10466.508-5B216.90
liver, embryo E12.CNhs10601.355-15F819.52
liver, embryo E13.CNhs10524.378-3H616.90
liver, embryo E14.CNhs10594.409-16E117.99
liver, embryo E15.CNhs10520.433-16D724.34
liver, embryo E16.CNhs10523.462-17F519.78
liver, embryo E17.CNhs10510.481-18A315.28
liver, embryo E18.CNhs10579.499-43G420.43
liver, neonate N00.CNhs11117.641-24F415.73
liver, neonate N03.CNhs11123.1345-25G211.26
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B912.17
liver, neonate N20.CNhs11220.823-25A312.12
liver, neonate N25.CNhs11198.1368-26H112.20
liver, neonate N30.CNhs11106.1382-42D112.06
lung, adult.CNhs10474.28-22B131.59
lung, embryo E12.CNhs10522.354-16G210.99
lung, embryo E14.CNhs10604.404-26F815.97
lung, embryo E15.CNhs11020.432-17C59.85
lung, embryo E16.CNhs10998.458-17B616.66
lung, embryo E17.CNhs10605.480-44A617.76
lung, embryo E18.CNhs10583.1287-20I630.23
lung, neonate N00.CNhs11224.640-42C630.44
lung, neonate N06.CNhs11212.683-20E522.54
lung, neonate N07.CNhs11111.715-19A319.71
lung, neonate N10.CNhs11219.750-23E624.24
lung, neonate N20.CNhs11109.822-18A429.00
lung, neonate N25.CNhs11119.1359-25C731.08
lung, neonate N30.CNhs11133.1394-42H236.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B646.23
mammary gland, adult pregnant day19.CNhs10476.588-5H231.73
medulla oblongata, adult.CNhs10477.17-12C251.38
medulla oblongata, neonate N30.CNhs11200.1396-42A352.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C223.48
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.96
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E328.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D727.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D827.85
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D929.72
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D529.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D629.25
olfactory brain, adult.CNhs10489.18-22I976.47
ovary, adult.CNhs10507.91-2I716.89
ovary, embryo E18.CNhs11040.505-44H712.11
ovary, neonate N00.CNhs11217.1299-22I415.31
oviduct, adult pregnant day01.CNhs10500.988-6G621.28
pancreas, adult.CNhs10486.34-16E435.84
pancreas, embryo E14.CNhs11012.405-44F416.02
pancreas, embryo E15.CNhs11042.1556-45F217.53
pancreas, embryo E16.CNhs11003.460-26E518.48
pancreas, embryo E17.CNhs10599.1558-45G326.87
pancreas, embryo E18.CNhs10580.1535-43I724.29
pancreas, neonate N00.CNhs11105.645-26G926.10
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B624.33
pancreas, neonate N25.CNhs11094.1555-45E229.52
pancreas, neonate N30.CNhs11182.1548-44H528.88
pituitary gland, adult.CNhs10493.21-1G833.02
pituitary gland, embryo E12.CNhs11018.346-16E614.04
pituitary gland, embryo E13.CNhs11009.370-44C713.71
pituitary gland, embryo E14.CNhs11037.398-44A516.29
pituitary gland, embryo E15.CNhs10592.427-16B921.81
pituitary gland, embryo E16.CNhs11036.449-43F619.62
pituitary gland, embryo E17.CNhs11039.1265-44F518.76
pituitary gland, neonate N00.CNhs11190.1308-22E920.09
placenta, adult pregnant day10.CNhs10472.539-13I724.88
placenta, adult pregnant day17.CNhs10464.577-18G345.12
prostate, adult.CNhs10470.859-1F816.10
skin, adult.CNhs10492.30-1C335.45
skin, neonate N00.CNhs11124.650-25G415.34
skin, neonate N03.CNhs11215.662-22H325.57
skin, neonate N06.CNhs11097.693-20I527.81
skin, neonate N10.CNhs11108.762-6C433.32
small intestine, neonate N16.CNhs11114.790-21I148.97
spinal cord, adult.CNhs10505.24-13C957.67
spleen, adult.CNhs10465.25-2G227.34
spleen, embryo E16.CNhs11035.461-43C116.10
spleen, embryo E18.CNhs11011.1271-21F213.15
spleen, neonate N10.CNhs11116.752-24D119.21
spleen, neonate N20.CNhs11112.824-19H127.07
spleen, neonate N25.CNhs11099.1354-25G321.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.65
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E313.76
stomach, embryo E15.CNhs10603.1252-16G816.88
stomach, embryo E16.CNhs11022.459-17D415.98
stomach, embryo E17.CNhs11006.1035-18D517.98
stomach, embryo E18.CNhs10999.1286-20C620.74
stomach, neonate N03.CNhs11193.1340-24B819.96
stomach, neonate N07.CNhs11210.718-18A923.47
stomach, neonate N25.CNhs11104.1355-25E424.08
stomach, neonate N30.CNhs11134.1386-42I142.00
submandibular gland, adult.CNhs10469.59-29C135.42
testis, adult.CNhs10504.57-7G531.00
testis, embryo E13.CNhs11031.389-23F511.96
testis, embryo E15.CNhs11034.443-27C57.61
testis, embryo E16.CNhs11033.470-26G512.44
testis, embryo E17.CNhs11029.486-18I516.79
testis, embryo E18.CNhs11027.503-18G515.21
testis, neonate N00.CNhs11189.1300-22B713.14
testis, neonate N07.CNhs11222.726-26I415.88
testis, neonate N10.CNhs11204.763-44D921.92
testis, neonate N20.CNhs11110.839-18H325.61
testis, neonate N30.CNhs11130.1391-42E231.11
thymus, adult.CNhs10471.38-12B524.02
thymus, embryo E14.CNhs11041.402-44I48.31
thymus, embryo E15.CNhs11005.430-45I28.22
thymus, embryo E16.CNhs11002.456-26C58.31
thymus, embryo E17.CNhs10581.478-18C115.22
thymus, embryo E18.CNhs10595.1273-19G421.26
thymus, neonate N02.CNhs11181.1541-43F815.75
thymus, neonate N03.CNhs11137.2104-43C715.51
thymus, neonate N06.CNhs11197.681-26C417.06
thymus, neonate N07.CNhs11211.713-19D316.92
thymus, neonate N10.CNhs11194.748-24E418.55
thymus, neonate N20.CNhs11186.820-7A223.19
thymus, neonate N25.CNhs11125.1362-25G719.82
thymus, neonate N30.CNhs11132.1393-42G223.38
tongue, adult.CNhs10499.32-1B441.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H336.18
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F733.91
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G530.72
urinary bladder, adult.CNhs10481.879-12E424.15
uterus, adult pregnant day19.CNhs10497.590-15F520.46
uterus, adult.CNhs10509.92-27E522.89
vagina, adult.CNhs10502.89-27D525.30
vesicular gland, adult.CNhs10491.51-27F824.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1104.48
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A289.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A386.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7102.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4115.09
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5136.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6109.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7115.28
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8114.19
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9128.92
whole body, embryo E11.CNhs11014.324-5I84.36
whole body, embryo E12.CNhs10587.857-27C918.36
whole body, embryo E13.CNhs10512.372-23H215.37
whole body, embryo E14.5.CNhs10578.420-27D215.07
whole body, embryo E14.CNhs10519.395-14B18.80
whole body, embryo E16.CNhs10514.453-14F211.95
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G521.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.33
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.18
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.94
whole body, embryo E17.5.CNhs10513.490-9F919.10
whole body, embryo E17.CNhs10517.475-3I522.98
whole body, embryo E18.CNhs10516.493-3B317.78
whole body, neonate N00.CNhs10525.657-19C217.19
whole body, neonate N01.CNhs10576.659-23C612.43
whole body, neonate N06.CNhs10515.692-21D115.44
whole body, neonate N10.CNhs10518.761-6B413.68





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.19e-0923
neuroblast (sensu Vertebrata)6.19e-0923
neuron1.06e-0733
neuronal stem cell1.06e-0733
neuroblast1.06e-0733
electrically signaling cell1.06e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.86e-1454
gray matter2.44e-1434
central nervous system1.07e-1373
neural tube2.36e-1352
neural rod2.36e-1352
future spinal cord2.36e-1352
neural keel2.36e-1352
ectoderm-derived structure1.45e-1295
ectoderm1.45e-1295
presumptive ectoderm1.45e-1295
nervous system2.06e-1275
brain grey matter4.00e-1229
regional part of telencephalon4.00e-1229
telencephalon4.00e-1229
brain2.69e-1147
future brain2.69e-1147
neurectoderm4.75e-1164
neural plate4.75e-1164
presumptive neural plate4.75e-1164
regional part of brain8.47e-1146
ecto-epithelium9.74e-1173
adult organism2.30e-1051
anterior neural tube2.49e-1040
regional part of forebrain6.73e-1039
forebrain6.73e-1039
future forebrain6.73e-1039
organ system subdivision1.34e-09194
cerebral cortex4.52e-0921
cerebral hemisphere4.52e-0921
pallium4.52e-0921
pre-chordal neural plate1.92e-0849
regional part of cerebral cortex4.84e-0817
occipital lobe1.15e-0710
visual cortex1.15e-0710
neocortex1.15e-0710
intestine1.57e-0731
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