FFCP PHASE1:Mm9::chr16:6348825..6348863,+: Difference between revisions
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{{FFCP|EntrezGene=268859|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=-265bp_to_uc007yce.2_5end|description=CAGE_peak_7_at_Rbfox1_5end|id=chr16:6348825..6348863,+|ontology_enrichment_celltype=CL:0000117!7.86e-19!23;CL:0000337!7.86e-19!23;CL:0000540!3.63e-12!33;CL:0000047!3.63e-12!33;CL:0000031!3.63e-12!33;CL:0000404!3.63e-12!33;CL:0000393!6.82e-09!39;CL:0000211!6.82e-09!39;CL:0002319!2.79e-07!43;CL:0000221!6.25e-07!44;CL:0000133!6.25e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-26,23;CL:0000337,1.03e-26,23;CL:0000540,2.18e-16,33;CL:0000047,2.18e-16,33;CL:0000031,2.18e-16,33;CL:0000404,2.18e-16,33;CL:0000393,8.71e-13,39;CL:0000211,8.71e-13,39;CL:0002319,5.76e-11,43;CL:0000221,1.45e-10,44;CL:0000133,1.45e-10,44;CL:0002609,1.53e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.82e-26!71;UBERON:0003075!1.82e-26!71;UBERON:0007284!1.82e-26!71;UBERON:0001049!2.01e-26!52;UBERON:0005068!2.01e-26!52;UBERON:0006241!2.01e-26!52;UBERON:0007135!2.01e-26!52;UBERON:0002020!6.11e-26!34;UBERON:0000955!4.63e-24!50;UBERON:0006238!4.63e-24!50;UBERON:0002616!1.38e-23!49;UBERON:0001017!1.67e-23!73;UBERON:0005743!1.67e-23!73;UBERON:0000073!2.51e-22!75;UBERON:0001016!2.51e-22!75;UBERON:0000033!2.56e-22!63;UBERON:0002791!1.27e-21!29;UBERON:0003528!1.27e-21!29;UBERON:0001893!1.27e-21!29;UBERON:0003056!1.81e-20!49;UBERON:0003080!1.42e-19!40;UBERON:0004121!1.71e-19!102;UBERON:0000924!1.71e-19!102;UBERON:0006601!1.71e-19!102;UBERON:0002780!7.61e-19!39;UBERON:0001890!7.61e-19!39;UBERON:0006240!7.61e-19!39;UBERON:0000956!1.17e-15!21;UBERON:0001869!1.17e-15!21;UBERON:0000203!1.17e-15!21;UBERON:0007811!1.42e-14!86;UBERON:0002619!4.23e-12!17;UBERON:0000153!8.06e-12!94;UBERON:0002021!8.85e-11!10;UBERON:0000411!8.85e-11!10;UBERON:0001950!8.85e-11!10;UBERON:0003076!2.32e-07!12;UBERON:0003057!2.32e-07!12;UBERON:0002420!4.11e-07!8;UBERON:0007245!4.11e-07!8;UBERON:0010009!4.11e-07!8;UBERON:0010011!4.11e-07!8;UBERON:0000454!4.11e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.51e-38,54;UBERON:0002020,9.20e-38,34;UBERON:0001049,3.55e-36,52;UBERON:0005068,3.55e-36,52;UBERON:0006241,3.55e-36,52;UBERON:0007135,3.55e-36,52;UBERON:0003528,1.94e-31,29;UBERON:0002791,1.94e-31,29;UBERON:0001893,1.94e-31,29;UBERON:0001017,3.95e-31,73;UBERON:0001016,6.42e-30,75;UBERON:0002616,6.00e-29,46;UBERON:0000955,4.31e-28,47;UBERON:0006238,4.31e-28,47;UBERON:0002346,5.75e-27,64;UBERON:0003075,5.75e-27,64;UBERON:0007284,5.75e-27,64;UBERON:0003080,9.64e-26,40;UBERON:0002780,1.06e-24,39;UBERON:0001890,1.06e-24,39;UBERON:0006240,1.06e-24,39;UBERON:0000956,1.03e-22,21;UBERON:0001869,1.03e-22,21;UBERON:0000203,1.03e-22,21;UBERON:0010371,4.49e-22,73;UBERON:0004121,1.19e-20,95;UBERON:0000924,1.19e-20,95;UBERON:0006601,1.19e-20,95;UBERON:0003056,3.31e-19,49;UBERON:0002619,1.67e-17,17;UBERON:0002021,5.64e-15,10;UBERON:0000411,5.64e-15,10;UBERON:0001950,5.64e-15,10;UBERON:0010314,5.80e-15,92;UBERON:0003076,1.52e-10,12;UBERON:0003057,1.52e-10,12;UBERON:0000025,8.19e-10,114;UBERON:0002420,1.20e-09,8;UBERON:0007245,1.20e-09,8;UBERON:0010009,1.20e-09,8;UBERON:0010011,1.20e-09,8;UBERON:0000454,1.20e-09,8;UBERON:0004111,1.95e-08,122;UBERON:0002240,2.80e-08,6;UBERON:0005174,2.80e-08,6;UBERON:0001137,2.80e-08,6;UBERON:0001948,2.77e-07,5;UBERON:0002315,2.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,5.28990979272033,2.53532561402472,0,0,0,0,0,0,0,10.6800300677732,8.77538599155989,9.67494822216357,5.42736870367227,5.96345060569357,6.61450315760752,3.45043695665651,5.51531271966013,3.30347642998166,3.95830748064082,5.06901559745603,5.14356522147756,6.86157327018072,4.68822033501084,6.70039197603314,3.37657566019008,3.36156145108982,6.48182888042069,7.97281412474976,6.33758115806022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,56.5066938232286,53.1994635306176,0,0,0,0,4.49371918214468,3.20250421973039,4.64921102817598,9.21268897019065,9.97290283588289,3.53239675751252,4.70499662896497,0,0,0,0.841767423545896,0,0.229902104433473,0,0.30140963567143,0.95251098811859,0.512454881139399,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,4.41608891984667,12.5543627102727,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.630540576424764,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,4.33486592967038,5.86058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0.584511715822624,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.201932899896295,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,11.2950368523413,27.1591889539234,23.4887160510153,15.9823459579629,14.3867329151835,10.5755145634558,8.77529250301348,6.75481804836331,12.2348450425735,15.5328093525546,0,1.19707462020309,0.512200817262403,1.21553358534147,0.838452650511929,1.47074806760011,0.44449345560323,0.824140228955577,0.962757628775446,1.26348605881899,2.5347929989024,2.26351609663291,2.24739617927718,1.53660365771686,1.66562859971278,0.952587382566147,1.50649623728312,2.12200142510076,1.64834360321323,1.03039244094078,0.685738504770831,1.77475806159337,1.43061713968393,1.30811774969096,1.41164070622996,1.35383372626682,1.46342378298218,1.05227884575137,1.7654534799962,0.561142271657738,1.06771516311757,0.886540341380071,1.22769312950907,2.16911577660352,0.964533054905707,2.49810577937946,1.40358965067245,0.429742108096597,0,0,0|short_description=p7@Rbfox1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268859 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-265bp_to_uc007yce.2_5end | |||
|cluster_id=chr16:6348825..6348863,+ | |||
|description=CAGE_peak_7_at_Rbfox1_5end | |||
|id=chr16:6348825..6348863,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.86e-19!23;CL:0000337!7.86e-19!23;CL:0000540!3.63e-12!33;CL:0000047!3.63e-12!33;CL:0000031!3.63e-12!33;CL:0000404!3.63e-12!33;CL:0000393!6.82e-09!39;CL:0000211!6.82e-09!39;CL:0002319!2.79e-07!43;CL:0000221!6.25e-07!44;CL:0000133!6.25e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-26,23;CL:0000337,1.03e-26,23;CL:0000540,2.18e-16,33;CL:0000047,2.18e-16,33;CL:0000031,2.18e-16,33;CL:0000404,2.18e-16,33;CL:0000393,8.71e-13,39;CL:0000211,8.71e-13,39;CL:0002319,5.76e-11,43;CL:0000221,1.45e-10,44;CL:0000133,1.45e-10,44;CL:0002609,1.53e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.82e-26!71;UBERON:0003075!1.82e-26!71;UBERON:0007284!1.82e-26!71;UBERON:0001049!2.01e-26!52;UBERON:0005068!2.01e-26!52;UBERON:0006241!2.01e-26!52;UBERON:0007135!2.01e-26!52;UBERON:0002020!6.11e-26!34;UBERON:0000955!4.63e-24!50;UBERON:0006238!4.63e-24!50;UBERON:0002616!1.38e-23!49;UBERON:0001017!1.67e-23!73;UBERON:0005743!1.67e-23!73;UBERON:0000073!2.51e-22!75;UBERON:0001016!2.51e-22!75;UBERON:0000033!2.56e-22!63;UBERON:0002791!1.27e-21!29;UBERON:0003528!1.27e-21!29;UBERON:0001893!1.27e-21!29;UBERON:0003056!1.81e-20!49;UBERON:0003080!1.42e-19!40;UBERON:0004121!1.71e-19!102;UBERON:0000924!1.71e-19!102;UBERON:0006601!1.71e-19!102;UBERON:0002780!7.61e-19!39;UBERON:0001890!7.61e-19!39;UBERON:0006240!7.61e-19!39;UBERON:0000956!1.17e-15!21;UBERON:0001869!1.17e-15!21;UBERON:0000203!1.17e-15!21;UBERON:0007811!1.42e-14!86;UBERON:0002619!4.23e-12!17;UBERON:0000153!8.06e-12!94;UBERON:0002021!8.85e-11!10;UBERON:0000411!8.85e-11!10;UBERON:0001950!8.85e-11!10;UBERON:0003076!2.32e-07!12;UBERON:0003057!2.32e-07!12;UBERON:0002420!4.11e-07!8;UBERON:0007245!4.11e-07!8;UBERON:0010009!4.11e-07!8;UBERON:0010011!4.11e-07!8;UBERON:0000454!4.11e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.51e-38,54;UBERON:0002020,9.20e-38,34;UBERON:0001049,3.55e-36,52;UBERON:0005068,3.55e-36,52;UBERON:0006241,3.55e-36,52;UBERON:0007135,3.55e-36,52;UBERON:0003528,1.94e-31,29;UBERON:0002791,1.94e-31,29;UBERON:0001893,1.94e-31,29;UBERON:0001017,3.95e-31,73;UBERON:0001016,6.42e-30,75;UBERON:0002616,6.00e-29,46;UBERON:0000955,4.31e-28,47;UBERON:0006238,4.31e-28,47;UBERON:0002346,5.75e-27,64;UBERON:0003075,5.75e-27,64;UBERON:0007284,5.75e-27,64;UBERON:0003080,9.64e-26,40;UBERON:0002780,1.06e-24,39;UBERON:0001890,1.06e-24,39;UBERON:0006240,1.06e-24,39;UBERON:0000956,1.03e-22,21;UBERON:0001869,1.03e-22,21;UBERON:0000203,1.03e-22,21;UBERON:0010371,4.49e-22,73;UBERON:0004121,1.19e-20,95;UBERON:0000924,1.19e-20,95;UBERON:0006601,1.19e-20,95;UBERON:0003056,3.31e-19,49;UBERON:0002619,1.67e-17,17;UBERON:0002021,5.64e-15,10;UBERON:0000411,5.64e-15,10;UBERON:0001950,5.64e-15,10;UBERON:0010314,5.80e-15,92;UBERON:0003076,1.52e-10,12;UBERON:0003057,1.52e-10,12;UBERON:0000025,8.19e-10,114;UBERON:0002420,1.20e-09,8;UBERON:0007245,1.20e-09,8;UBERON:0010009,1.20e-09,8;UBERON:0010011,1.20e-09,8;UBERON:0000454,1.20e-09,8;UBERON:0004111,1.95e-08,122;UBERON:0002240,2.80e-08,6;UBERON:0005174,2.80e-08,6;UBERON:0001137,2.80e-08,6;UBERON:0001948,2.77e-07,5;UBERON:0002315,2.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,5.28990979272033,2.53532561402472,0,0,0,0,0,0,0,10.6800300677732,8.77538599155989,9.67494822216357,5.42736870367227,5.96345060569357,6.61450315760752,3.45043695665651,5.51531271966013,3.30347642998166,3.95830748064082,5.06901559745603,5.14356522147756,6.86157327018072,4.68822033501084,6.70039197603314,3.37657566019008,3.36156145108982,6.48182888042069,7.97281412474976,6.33758115806022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,56.5066938232286,53.1994635306176,0,0,0,0,4.49371918214468,3.20250421973039,4.64921102817598,9.21268897019065,9.97290283588289,3.53239675751252,4.70499662896497,0,0,0,0.841767423545896,0,0.229902104433473,0,0.30140963567143,0.95251098811859,0.512454881139399,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,4.41608891984667,12.5543627102727,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.630540576424764,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,4.33486592967038,5.86058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0.584511715822624,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.201932899896295,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,11.2950368523413,27.1591889539234,23.4887160510153,15.9823459579629,14.3867329151835,10.5755145634558,8.77529250301348,6.75481804836331,12.2348450425735,15.5328093525546,0,1.19707462020309,0.512200817262403,1.21553358534147,0.838452650511929,1.47074806760011,0.44449345560323,0.824140228955577,0.962757628775446,1.26348605881899,2.5347929989024,2.26351609663291,2.24739617927718,1.53660365771686,1.66562859971278,0.952587382566147,1.50649623728312,2.12200142510076,1.64834360321323,1.03039244094078,0.685738504770831,1.77475806159337,1.43061713968393,1.30811774969096,1.41164070622996,1.35383372626682,1.46342378298218,1.05227884575137,1.7654534799962,0.561142271657738,1.06771516311757,0.886540341380071,1.22769312950907,2.16911577660352,0.964533054905707,2.49810577937946,1.40358965067245,0.429742108096597,0,0,0 | |||
|short_description=p7@Rbfox1 | |||
}} |
Latest revision as of 17:05, 25 September 2015
Short description: | p7@Rbfox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rbfox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -265bp_to_uc007yce.2_5end |
EntrezGene: | Rbfox1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.03e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.03e-26 | 23 |
neuron | 2.18e-16 | 33 |
neuronal stem cell | 2.18e-16 | 33 |
neuroblast | 2.18e-16 | 33 |
electrically signaling cell | 2.18e-16 | 33 |
electrically responsive cell | 8.71e-13 | 39 |
electrically active cell | 8.71e-13 | 39 |
neural cell | 5.76e-11 | 43 |
ectodermal cell | 1.45e-10 | 44 |
neurectodermal cell | 1.45e-10 | 44 |
neuron of cerebral cortex | 1.53e-08 | 6 |