FFCP PHASE1:Mm9::chr11:76281976..76281988,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:76281976..76281988,-
|short_description=p17@Abr
|description=CAGE_peak_17_at_Abr_5end
|association_with_transcript=-9bp_to_ENSMUST00000065028_5end
|Entre...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=109934 | |EntrezGene=109934 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SSL4 | |UniProt=Q5SSL4 | ||
|association_with_transcript=-9bp_to_ENSMUST00000065028_5end | |||
|cluster_id=chr11:76281976..76281988,- | |||
|description=CAGE_peak_17_at_Abr_5end | |||
|id=chr11:76281976..76281988,- | |||
|ontology_enrichment_celltype=CL:0000540!1.29e-16!33;CL:0000047!1.29e-16!33;CL:0000031!1.29e-16!33;CL:0000404!1.29e-16!33;CL:0000393!1.27e-12!39;CL:0000211!1.27e-12!39;CL:0000221!5.65e-12!44;CL:0000133!5.65e-12!44;CL:0000117!7.67e-12!23;CL:0000337!7.67e-12!23;CL:0002319!1.66e-11!43;CL:0000055!1.15e-08!50;CL:0002609!6.39e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-30,23;CL:0000337,1.38e-30,23;CL:0002609,4.10e-23,6;CL:0000540,1.56e-20,33;CL:0000047,1.56e-20,33;CL:0000031,1.56e-20,33;CL:0000404,1.56e-20,33;CL:0000393,5.68e-17,39;CL:0000211,5.68e-17,39;CL:0002319,3.78e-15,43;CL:0000221,9.60e-15,44;CL:0000133,9.60e-15,44;CL:0002613,7.39e-13,3;CL:0002608,1.64e-12,3;CL:0000120,4.27e-12,3;CL:0002321,2.75e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.33e-11!102;UBERON:0000924!1.33e-11!102;UBERON:0006601!1.33e-11!102;UBERON:0001017!2.38e-11!73;UBERON:0005743!2.38e-11!73;UBERON:0002346!8.42e-11!71;UBERON:0003075!8.42e-11!71;UBERON:0007284!8.42e-11!71;UBERON:0000073!1.02e-10!75;UBERON:0001016!1.02e-10!75;UBERON:0003056!7.11e-10!49;UBERON:0000033!2.00e-08!63;UBERON:0001049!4.51e-07!52;UBERON:0005068!4.51e-07!52;UBERON:0006241!4.51e-07!52;UBERON:0007135!4.51e-07!52;UBERON:0000369!5.85e-07!5;UBERON:0002435!5.85e-07!5;UBERON:0000204!5.85e-07!5;UBERON:0010082!5.85e-07!5;UBERON:0002020!8.54e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.96e-20,34;UBERON:0000369,7.31e-20,5;UBERON:0002435,7.31e-20,5;UBERON:0000204,7.31e-20,5;UBERON:0010082,7.31e-20,5;UBERON:0003528,1.94e-17,29;UBERON:0002791,1.94e-17,29;UBERON:0001893,1.94e-17,29;UBERON:0002780,1.63e-14,39;UBERON:0001890,1.63e-14,39;UBERON:0006240,1.63e-14,39;UBERON:0003080,4.32e-14,40;UBERON:0001049,6.40e-14,52;UBERON:0005068,6.40e-14,52;UBERON:0006241,6.40e-14,52;UBERON:0007135,6.40e-14,52;UBERON:0001017,7.32e-14,73;UBERON:0001016,2.11e-13,75;UBERON:0000073,2.67e-13,54;UBERON:0002420,2.48e-12,8;UBERON:0007245,2.48e-12,8;UBERON:0010009,2.48e-12,8;UBERON:0010011,2.48e-12,8;UBERON:0000454,2.48e-12,8;UBERON:0002616,6.17e-12,46;UBERON:0000955,1.25e-11,47;UBERON:0006238,1.25e-11,47;UBERON:0003056,4.68e-11,49;UBERON:0002346,8.86e-11,64;UBERON:0003075,8.86e-11,64;UBERON:0007284,8.86e-11,64;UBERON:0004121,7.16e-10,95;UBERON:0000924,7.16e-10,95;UBERON:0006601,7.16e-10,95;UBERON:0001954,3.40e-09,7;UBERON:0003022,3.40e-09,7;UBERON:0002421,3.40e-09,7;UBERON:0000349,3.40e-09,7;UBERON:0002600,3.40e-09,7;UBERON:0010371,4.23e-09,73;UBERON:0000956,2.62e-08,21;UBERON:0001869,2.62e-08,21;UBERON:0000203,2.62e-08,21 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,4.04632921719196,4.23192783417626,6.33831403506179,0,0,0,0,0,0,0,6.22137673850866,5.40023753326763,4.41682418837902,0,1.32521124570968,7.83941114975706,8.33855597858656,3.67687514644008,0,0,0,7.25374582516066,8.96578907303615,6.77187381723788,0,0,0.61119299110724,0.294628585473668,0.854230084794618,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,1.37250180845588,8.54449594367478,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.612328492361951,0.512454881139399,0.468508622798644,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24813523134351,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.540183282093931,1.03486947026204,0.643011105094777,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.341467211508268,0,0.628839487883947,0.919217542250071,0.888986911206461,0,0.320919209591815,0.505394423527595,1.77435509923168,0.188626341386076,0.280924522409647,0.640251524048693,0.631790158511746,0.476293691283074,1.0429589335037,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.953744759789284,0.290692833264657,0.941093804153306,1.26921911837515,0.914639864363863,0.263069711437843,0.543216455383447,1.12228454331548,0.830445126869219,0.492522411877817,0,1.08455788830176,0.578719832943424,1.74867404556562,0.233931608445408,0,0,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,4.04632921719196,4.23192783417626,6.33831403506179,0,0,0,0,0,0,0,6.22137673850866,5.40023753326763,4.41682418837902,0,1.32521124570968,7.83941114975706,8.33855597858656,3.67687514644008,0,0,0,7.25374582516066,8.96578907303615,6.77187381723788,0,0,0.61119299110724,0.294628585473668,0.854230084794618,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,1.37250180845588,8.54449594367478,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.612328492361951,0.512454881139399,0.468508622798644,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24813523134351,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.540183282093931,1.03486947026204,0.643011105094777,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.341467211508268,0,0.628839487883947,0.919217542250071,0.888986911206461,0,0.320919209591815,0.505394423527595,1.77435509923168,0.188626341386076,0.280924522409647,0.640251524048693,0.631790158511746,0.476293691283074,1.0429589335037,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.953744759789284,0.290692833264657,0.941093804153306,1.26921911837515,0.914639864363863,0.263069711437843,0.543216455383447,1.12228454331548,0.830445126869219,0.492522411877817,0,1.08455788830176,0.578719832943424,1.74867404556562,0.233931608445408,0,0,0,0 | ||
|short_description=p17@Abr | |||
}} | }} |
Latest revision as of 16:56, 25 September 2015
Short description: | p17@Abr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Abr_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -9bp_to_ENSMUST00000065028_5end |
EntrezGene: | Abr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.38e-30 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-30 | 23 |
neuron of cerebral cortex | 4.10e-23 | 6 |
neuron | 1.56e-20 | 33 |
neuronal stem cell | 1.56e-20 | 33 |
neuroblast | 1.56e-20 | 33 |
electrically signaling cell | 1.56e-20 | 33 |
electrically responsive cell | 5.68e-17 | 39 |
electrically active cell | 5.68e-17 | 39 |
neural cell | 3.78e-15 | 43 |
ectodermal cell | 9.60e-15 | 44 |
neurectodermal cell | 9.60e-15 | 44 |
striatum neuron | 7.39e-13 | 3 |
hippocampal neuron | 1.64e-12 | 3 |
granule cell | 4.27e-12 | 3 |
embryonic cell | 2.75e-08 | 70 |