FFCP PHASE1:Mm9::chr11:75993098..75993151,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68299 | |EntrezGene=68299 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CCB4,E9PXG9,E9Q124,E9Q3C3 | |UniProt=Q8CCB4,E9PXG9,E9Q124,E9Q3C3 | ||
|association_with_transcript=0bp_to_ENSMUST00000056601,ENSMUST00000094015,ENSMUST00000108419,ENSMUST00000129256,ENSMUST00000140886,ENSMUST00000170730,NM_026664,uc007kfa.1,uc007kfd.1,uc007kfe.1,uc011xzq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000056601,ENSMUST00000094015,ENSMUST00000108419,ENSMUST00000129256,ENSMUST00000140886,ENSMUST00000170730,NM_026664,uc007kfa.1,uc007kfd.1,uc007kfe.1,uc011xzq.1_5end | ||
|cluster_id=chr11:75993098..75993151,- | |||
|description=CAGE_peak_1_at_Vps53_5end | |description=CAGE_peak_1_at_Vps53_5end | ||
|id=chr11:75993098..75993151,- | |id=chr11:75993098..75993151,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.51e-13!51;UBERON:0000064!1.00e-11!99;UBERON:0000955!2.76e-10!50;UBERON:0006238!2.76e-10!50;UBERON:0002791!6.84e-10!29;UBERON:0003528!6.84e-10!29;UBERON:0001893!6.84e-10!29;UBERON:0002020!7.08e-10!34;UBERON:0002616!8.45e-10!49;UBERON:0007811!8.57e-10!86;UBERON:0000033!2.51e-09!63;UBERON:0001049!3.20e-09!52;UBERON:0005068!3.20e-09!52;UBERON:0006241!3.20e-09!52;UBERON:0007135!3.20e-09!52;UBERON:0000153!1.97e-08!94;UBERON:0003080!3.96e-08!40;UBERON:0002780!1.20e-07!39;UBERON:0001890!1.20e-07!39;UBERON:0006240!1.20e-07!39;UBERON:0000956!1.80e-07!21;UBERON:0001869!1.80e-07!21;UBERON:0000203!1.80e-07!21;UBERON:0003056!2.05e-07!49;UBERON:0002619!7.23e-07!17;UBERON:0002021!7.30e-07!10;UBERON:0000411!7.30e-07!10;UBERON:0001950!7.30e-07!10 | |ontology_enrichment_uberon=UBERON:0007023!3.51e-13!51;UBERON:0000064!1.00e-11!99;UBERON:0000955!2.76e-10!50;UBERON:0006238!2.76e-10!50;UBERON:0002791!6.84e-10!29;UBERON:0003528!6.84e-10!29;UBERON:0001893!6.84e-10!29;UBERON:0002020!7.08e-10!34;UBERON:0002616!8.45e-10!49;UBERON:0007811!8.57e-10!86;UBERON:0000033!2.51e-09!63;UBERON:0001049!3.20e-09!52;UBERON:0005068!3.20e-09!52;UBERON:0006241!3.20e-09!52;UBERON:0007135!3.20e-09!52;UBERON:0000153!1.97e-08!94;UBERON:0003080!3.96e-08!40;UBERON:0002780!1.20e-07!39;UBERON:0001890!1.20e-07!39;UBERON:0006240!1.20e-07!39;UBERON:0000956!1.80e-07!21;UBERON:0001869!1.80e-07!21;UBERON:0000203!1.80e-07!21;UBERON:0003056!2.05e-07!49;UBERON:0002619!7.23e-07!17;UBERON:0002021!7.30e-07!10;UBERON:0000411!7.30e-07!10;UBERON:0001950!7.30e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.51e-13,51;UBERON:0000073,4.57e-10,54;UBERON:0003528,6.84e-10,29;UBERON:0002791,6.84e-10,29;UBERON:0001893,6.84e-10,29;UBERON:0002020,7.08e-10,34;UBERON:0001049,3.20e-09,52;UBERON:0005068,3.20e-09,52;UBERON:0006241,3.20e-09,52;UBERON:0007135,3.20e-09,52;UBERON:0000955,5.32e-09,47;UBERON:0006238,5.32e-09,47;UBERON:0002616,1.56e-08,46;UBERON:0010371,1.67e-08,73;UBERON:0003080,3.96e-08,40;UBERON:0002780,1.20e-07,39;UBERON:0001890,1.20e-07,39;UBERON:0006240,1.20e-07,39;UBERON:0004121,1.27e-07,95;UBERON:0000924,1.27e-07,95;UBERON:0006601,1.27e-07,95;UBERON:0000160,1.49e-07,31;UBERON:0000956,1.80e-07,21;UBERON:0001869,1.80e-07,21;UBERON:0000203,1.80e-07,21;UBERON:0002346,1.98e-07,64;UBERON:0003075,1.98e-07,64;UBERON:0007284,1.98e-07,64;UBERON:0003056,2.05e-07,49;UBERON:0011216,3.23e-07,194;UBERON:0002619,7.23e-07,17;UBERON:0002021,7.30e-07,10;UBERON:0000411,7.30e-07,10;UBERON:0001950,7.30e-07,10 | |||
|phase1_expression=40.9981048588273,84.8010240563647,77.8048699356107,88.0170854902875,95.6710844197523,61.4438135197517,64.4770888043651,34.734174005784,21.6814632113567,21.5339364216234,33.3875038039735,37.8917755227848,55.1266350378482,48.5183233425436,26.648780945253,30.7762406432535,18.88817070946,50.9471397053554,54.0230868406611,44.5609134387932,49.920411318678,31.2766496282789,29.7767759618386,67.1968175732308,58.7287759531955,67.7593717655724,68.4911573892929,69.1662656921704,56.436955578543,64.5197132185423,55.6543581744815,17.7808588568697,23.9875267157982,15.8481681015439,41.3057816244323,34.2443369438494,31.0337421518801,55.6647068880087,53.1308034276184,61.7758017889082,55.8819913629464,68.987593980803,67.4859390713303,55.7722903631807,50.0802040224402,37.443537440983,27.3836970521814,31.6136476751647,39.7631990749394,44.9133066861595,39.0562116334761,18.6878333674463,42.4489993326073,53.6767985088395,46.7170380808025,39.6179531495358,36.3897468722221,34.0343580903112,49.3652164497419,61.3629535955558,55.7771635085438,32.5290750786367,17.7858959222228,35.995988691256,43.5101199529469,36.2344858622511,19.4740071836963,23.4373166246148,51.6374269296219,57.5125297293002,47.5334412654123,47.7037143954352,51.0206329598227,50.588700075776,56.6446733717777,56.9915647698213,75.9799578895782,75.4632168083459,68.6621203655408,58.0299666012853,62.2115976496386,59.3841242434706,63.0953577743121,61.9038871034848,59.8969131285096,51.8546310433655,52.2504068532708,52.7510431685601,33.1680726799346,43.1513608209745,45.2188602374617,51.6254326188832,25.1589393471868,52.3512095888683,36.3874793770695,42.5625542742469,44.8017700220288,28.1210032253795,24.6796704372725,23.6737514921928,34.5066378452867,34.6481489018658,71.3454671178608,71.1066703153331,28.360326372469,30.4031838570118,30.8369911459018,49.8983554372292,75.6098620249741,48.2436951960681,35.0440360067594,41.4073050504512,42.6638669923708,39.0371639031292,43.1550555188037,40.4646424081555,64.2706916109372,35.2822430884584,47.7689698052932,36.0740075382722,36.4388505459649,34.4261429726008,83.876292548155,82.2714039602448,70.5835401961344,61.3096932500619,26.4791425158084,29.395233818677,30.4968544975355,82.2350610332477,89.2126175496322,57.9266563240305,94.5604301845984,104.843337505436,80.8295493336689,85.9878694259116,28.005825058837,40.5566724188903,50.7972744451686,60.6072544953045,36.8240853584452,31.2666862029523,39.6136685571768,43.7043971723574,47.1492939118702,53.5515350790672,50.1304226394549,83.5611887487021,35.3531508409861,35.55194307155,34.31046921197,25.6459006940263,45.0436543745469,49.1035554796255,46.7125449646032,29.2580372223185,55.4748417977455,41.1756651383544,37.7937454196138,29.2047339275058,38.4622738368998,35.6522881692809,32.4340287751738,39.1560821177334,35.3271688512096,33.2523540993083,36.2169091889486,34.445775998315,32.9119699826961,39.0718564508247,38.1023404865522,38.1581967180117,39.5190207523891,39.72509995307,99.2568557222681,62.5660043266049,81.2830206140143,70.8727518658299,30.073643325468,35.7644474665075,44.0726717721559,57.0764374684059,67.6029253288406,75.9000248189111,66.9085976777761,74.9380243994249,82.9406189040889,76.7971982078842,78.1805989347672,65.6138168317582,71.3255564586491,67.1106090867218,26.1741703315253,38.3875002368689,49.5914036961554,45.4142461095051,38.7904974335251,43.5543441518878,50.3362835509088,64.2104143711269,67.038456788267,70.8299720911135,42.0962730463751,25.6941462802785,32.0391162034521,27.8829019357219,31.6461789366065,34.2471566848432,32.0828573244589,33.372751944294,37.7775078385832,37.065790780391,57.5072826109418,43.5404908772149,47.4297263134132,50.0106178335281,57.22777491349,53.0687873499704,51.3613868663161,27.6657461184908,34.2226450528254,31.4028408684098,35.4382274915638,39.5314767562685,48.7989463816328,41.1731996979955,49.8127055375564,43.4070791711599,43.3716970748365,53.2555772826149,46.4522601219259,49.9039252106215,51.2690365393526,39.1612092349471,62.4540626734176,61.2579576796506,81.8808008937739,77.9457715838151,24.262371915748,44.9398250423784,34.7059041357882,34.7490482424008,37.2682478077742,38.951914066266,40.1037613348309,34.8184132870264,37.2425845540903,47.9299606974552,44.2722311300106,78.7237225233427,46.8402281187286,31.5176118491042,32.7402788300688,42.8922319728592,55.7529581027844,31.5614827001476,36.2788268357701,37.9096210309355,42.5234725748313,32.5881256820563,52.9778000994853,35.262771759318,39.2147116223193,35.0800801308756,55.8718625447493,55.6931933540209,52.7681388918371,34.7517911480429,40.8773440753504,34.2939256050548,38.3054904667311,41.5599345012824,35.7071374706602,43.5384877233877,50.9237606498251,53.1698497868189,63.2916502417741,75.6827901001393,50.8612944092102,52.230992987783,59.9249166895745,73.6992639855325,72.287247484203,73.7992702001828,37.078981133134,29.9260958546673,32.4090422896995,39.5573759709851,37.0441357123978,38.2059549254893,26.5166350790414,32.4687369390887,27.6399947608848,51.5522133728161,26.5722234608154,30.2946006019005,49.1424300739196,49.972102747458,56.55590401026,57.5870759063184,51.4931029168843,68.3183008578317,74.2693796961973,62.1339313086926,33.2578833823672,27.6605610181361,32.9262396009624,46.6682852025714,45.9808971580723,40.0426017413144,31.3343827184163,31.9000742867678,45.4040961363328,36.7207863655529,36.0037507822332,66.3623353319174,47.4377003778984,53.4096977257102,48.8502294396509,51.2016349608997,49.471657340535,52.0446296421465,49.9190601850071,57.5508764704442,57.2313117979049,55.4544018252623,62.3730436734416,58.8816470838816,65.5679421238602,58.0429782054941,49.5028676024164,43.4215065989862,39.7886540782866,59.3092053678825,67.9410561133279,69.9639204700953,86.3904567688635,61.6933687963497,74.5472432254528,81.9378920982775,86.5072225293489,56.1959906263858,87.6905625306422,88.381085994595,78.3026100268895,100.871949522225,74.7684974823938,90.6080545565685,39.4391920819871,38.7054127199,41.3175325925005,37.6815411455856,35.843850809385,42.8355374688533,51.1167473943715,49.4484137373346,54.2353464210168,43.716617635137,50.9493392779382,44.8930692498861,39.7976406747,40.8480472343066,37.3904902901042,39.5323763764951,37.0829843023538,44.1762114861885,46.5657067907736,50.9308263665015,52.4589956149686,49.8707015307738,42.9185141905178,51.8886707377413,45.0783932189434,41.5457724748132,46.4637051096842,49.9832451731901,42.9140999752923,51.6250889925119,42.1154314340818,37.5302077850897,45.4246457918355,38.1144629317476,39.1600420291717,49.7123050096512,43.2773475624006,39.5362739448869,41.8921447230767,42.5741438900665,47.5329063021864 | |phase1_expression=40.9981048588273,84.8010240563647,77.8048699356107,88.0170854902875,95.6710844197523,61.4438135197517,64.4770888043651,34.734174005784,21.6814632113567,21.5339364216234,33.3875038039735,37.8917755227848,55.1266350378482,48.5183233425436,26.648780945253,30.7762406432535,18.88817070946,50.9471397053554,54.0230868406611,44.5609134387932,49.920411318678,31.2766496282789,29.7767759618386,67.1968175732308,58.7287759531955,67.7593717655724,68.4911573892929,69.1662656921704,56.436955578543,64.5197132185423,55.6543581744815,17.7808588568697,23.9875267157982,15.8481681015439,41.3057816244323,34.2443369438494,31.0337421518801,55.6647068880087,53.1308034276184,61.7758017889082,55.8819913629464,68.987593980803,67.4859390713303,55.7722903631807,50.0802040224402,37.443537440983,27.3836970521814,31.6136476751647,39.7631990749394,44.9133066861595,39.0562116334761,18.6878333674463,42.4489993326073,53.6767985088395,46.7170380808025,39.6179531495358,36.3897468722221,34.0343580903112,49.3652164497419,61.3629535955558,55.7771635085438,32.5290750786367,17.7858959222228,35.995988691256,43.5101199529469,36.2344858622511,19.4740071836963,23.4373166246148,51.6374269296219,57.5125297293002,47.5334412654123,47.7037143954352,51.0206329598227,50.588700075776,56.6446733717777,56.9915647698213,75.9799578895782,75.4632168083459,68.6621203655408,58.0299666012853,62.2115976496386,59.3841242434706,63.0953577743121,61.9038871034848,59.8969131285096,51.8546310433655,52.2504068532708,52.7510431685601,33.1680726799346,43.1513608209745,45.2188602374617,51.6254326188832,25.1589393471868,52.3512095888683,36.3874793770695,42.5625542742469,44.8017700220288,28.1210032253795,24.6796704372725,23.6737514921928,34.5066378452867,34.6481489018658,71.3454671178608,71.1066703153331,28.360326372469,30.4031838570118,30.8369911459018,49.8983554372292,75.6098620249741,48.2436951960681,35.0440360067594,41.4073050504512,42.6638669923708,39.0371639031292,43.1550555188037,40.4646424081555,64.2706916109372,35.2822430884584,47.7689698052932,36.0740075382722,36.4388505459649,34.4261429726008,83.876292548155,82.2714039602448,70.5835401961344,61.3096932500619,26.4791425158084,29.395233818677,30.4968544975355,82.2350610332477,89.2126175496322,57.9266563240305,94.5604301845984,104.843337505436,80.8295493336689,85.9878694259116,28.005825058837,40.5566724188903,50.7972744451686,60.6072544953045,36.8240853584452,31.2666862029523,39.6136685571768,43.7043971723574,47.1492939118702,53.5515350790672,50.1304226394549,83.5611887487021,35.3531508409861,35.55194307155,34.31046921197,25.6459006940263,45.0436543745469,49.1035554796255,46.7125449646032,29.2580372223185,55.4748417977455,41.1756651383544,37.7937454196138,29.2047339275058,38.4622738368998,35.6522881692809,32.4340287751738,39.1560821177334,35.3271688512096,33.2523540993083,36.2169091889486,34.445775998315,32.9119699826961,39.0718564508247,38.1023404865522,38.1581967180117,39.5190207523891,39.72509995307,99.2568557222681,62.5660043266049,81.2830206140143,70.8727518658299,30.073643325468,35.7644474665075,44.0726717721559,57.0764374684059,67.6029253288406,75.9000248189111,66.9085976777761,74.9380243994249,82.9406189040889,76.7971982078842,78.1805989347672,65.6138168317582,71.3255564586491,67.1106090867218,26.1741703315253,38.3875002368689,49.5914036961554,45.4142461095051,38.7904974335251,43.5543441518878,50.3362835509088,64.2104143711269,67.038456788267,70.8299720911135,42.0962730463751,25.6941462802785,32.0391162034521,27.8829019357219,31.6461789366065,34.2471566848432,32.0828573244589,33.372751944294,37.7775078385832,37.065790780391,57.5072826109418,43.5404908772149,47.4297263134132,50.0106178335281,57.22777491349,53.0687873499704,51.3613868663161,27.6657461184908,34.2226450528254,31.4028408684098,35.4382274915638,39.5314767562685,48.7989463816328,41.1731996979955,49.8127055375564,43.4070791711599,43.3716970748365,53.2555772826149,46.4522601219259,49.9039252106215,51.2690365393526,39.1612092349471,62.4540626734176,61.2579576796506,81.8808008937739,77.9457715838151,24.262371915748,44.9398250423784,34.7059041357882,34.7490482424008,37.2682478077742,38.951914066266,40.1037613348309,34.8184132870264,37.2425845540903,47.9299606974552,44.2722311300106,78.7237225233427,46.8402281187286,31.5176118491042,32.7402788300688,42.8922319728592,55.7529581027844,31.5614827001476,36.2788268357701,37.9096210309355,42.5234725748313,32.5881256820563,52.9778000994853,35.262771759318,39.2147116223193,35.0800801308756,55.8718625447493,55.6931933540209,52.7681388918371,34.7517911480429,40.8773440753504,34.2939256050548,38.3054904667311,41.5599345012824,35.7071374706602,43.5384877233877,50.9237606498251,53.1698497868189,63.2916502417741,75.6827901001393,50.8612944092102,52.230992987783,59.9249166895745,73.6992639855325,72.287247484203,73.7992702001828,37.078981133134,29.9260958546673,32.4090422896995,39.5573759709851,37.0441357123978,38.2059549254893,26.5166350790414,32.4687369390887,27.6399947608848,51.5522133728161,26.5722234608154,30.2946006019005,49.1424300739196,49.972102747458,56.55590401026,57.5870759063184,51.4931029168843,68.3183008578317,74.2693796961973,62.1339313086926,33.2578833823672,27.6605610181361,32.9262396009624,46.6682852025714,45.9808971580723,40.0426017413144,31.3343827184163,31.9000742867678,45.4040961363328,36.7207863655529,36.0037507822332,66.3623353319174,47.4377003778984,53.4096977257102,48.8502294396509,51.2016349608997,49.471657340535,52.0446296421465,49.9190601850071,57.5508764704442,57.2313117979049,55.4544018252623,62.3730436734416,58.8816470838816,65.5679421238602,58.0429782054941,49.5028676024164,43.4215065989862,39.7886540782866,59.3092053678825,67.9410561133279,69.9639204700953,86.3904567688635,61.6933687963497,74.5472432254528,81.9378920982775,86.5072225293489,56.1959906263858,87.6905625306422,88.381085994595,78.3026100268895,100.871949522225,74.7684974823938,90.6080545565685,39.4391920819871,38.7054127199,41.3175325925005,37.6815411455856,35.843850809385,42.8355374688533,51.1167473943715,49.4484137373346,54.2353464210168,43.716617635137,50.9493392779382,44.8930692498861,39.7976406747,40.8480472343066,37.3904902901042,39.5323763764951,37.0829843023538,44.1762114861885,46.5657067907736,50.9308263665015,52.4589956149686,49.8707015307738,42.9185141905178,51.8886707377413,45.0783932189434,41.5457724748132,46.4637051096842,49.9832451731901,42.9140999752923,51.6250889925119,42.1154314340818,37.5302077850897,45.4246457918355,38.1144629317476,39.1600420291717,49.7123050096512,43.2773475624006,39.5362739448869,41.8921447230767,42.5741438900665,47.5329063021864 | ||
|short_description=p1@Vps53 | |short_description=p1@Vps53 | ||
}} | }} |
Latest revision as of 16:49, 25 September 2015
Short description: | p1@Vps53 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vps53_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000056601, ENSMUST00000094015, ENSMUST00000108419, ENSMUST00000129256, ENSMUST00000140886, ENSMUST00000170730, NM_026664, uc007kfa.1, uc007kfd.1, uc007kfe.1, uc011xzq.1_5end |
EntrezGene: | Vps53 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.51e-13 | 51 |
regional part of nervous system | 4.57e-10 | 54 |
brain grey matter | 6.84e-10 | 29 |
regional part of telencephalon | 6.84e-10 | 29 |
telencephalon | 6.84e-10 | 29 |
gray matter | 7.08e-10 | 34 |
neural tube | 3.20e-09 | 52 |
neural rod | 3.20e-09 | 52 |
future spinal cord | 3.20e-09 | 52 |
neural keel | 3.20e-09 | 52 |
brain | 5.32e-09 | 47 |
future brain | 5.32e-09 | 47 |
regional part of brain | 1.56e-08 | 46 |
ecto-epithelium | 1.67e-08 | 73 |
anterior neural tube | 3.96e-08 | 40 |
regional part of forebrain | 1.20e-07 | 39 |
forebrain | 1.20e-07 | 39 |
future forebrain | 1.20e-07 | 39 |
ectoderm-derived structure | 1.27e-07 | 95 |
ectoderm | 1.27e-07 | 95 |
presumptive ectoderm | 1.27e-07 | 95 |
intestine | 1.49e-07 | 31 |
cerebral cortex | 1.80e-07 | 21 |
cerebral hemisphere | 1.80e-07 | 21 |
pallium | 1.80e-07 | 21 |
neurectoderm | 1.98e-07 | 64 |
neural plate | 1.98e-07 | 64 |
presumptive neural plate | 1.98e-07 | 64 |
pre-chordal neural plate | 2.05e-07 | 49 |
organ system subdivision | 3.23e-07 | 194 |
regional part of cerebral cortex | 7.23e-07 | 17 |
occipital lobe | 7.30e-07 | 10 |
visual cortex | 7.30e-07 | 10 |
neocortex | 7.30e-07 | 10 |