FFCP PHASE1:Mm9::chr16:57121568..57121599,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=28185 | |EntrezGene=28185 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CZW5 | |UniProt=Q9CZW5 | ||
|association_with_transcript=-227bp_to_ENSMUST00000166897,NM_138599,uc007zmz.1_5end | |association_with_transcript=-227bp_to_ENSMUST00000166897,NM_138599,uc007zmz.1_5end | ||
|cluster_id=chr16:57121568..57121599,+ | |||
|description=CAGE_peak_6_at_Tomm70a_5end | |description=CAGE_peak_6_at_Tomm70a_5end | ||
|id=chr16:57121568..57121599,+ | |id=chr16:57121568..57121599,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.72e-09!34;UBERON:0001049!1.90e-09!52;UBERON:0005068!1.90e-09!52;UBERON:0006241!1.90e-09!52;UBERON:0007135!1.90e-09!52;UBERON:0001017!2.49e-09!73;UBERON:0005743!2.49e-09!73;UBERON:0003080!2.62e-09!40;UBERON:0002780!2.72e-09!39;UBERON:0001890!2.72e-09!39;UBERON:0006240!2.72e-09!39;UBERON:0003056!4.10e-09!49;UBERON:0002346!5.18e-09!71;UBERON:0003075!5.18e-09!71;UBERON:0007284!5.18e-09!71;UBERON:0000073!1.12e-08!75;UBERON:0001016!1.12e-08!75;UBERON:0000955!4.26e-07!50;UBERON:0006238!4.26e-07!50;UBERON:0002616!5.30e-07!49;UBERON:0002791!6.20e-07!29;UBERON:0003528!6.20e-07!29;UBERON:0001893!6.20e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.56e-11,64;UBERON:0003075,8.56e-11,64;UBERON:0007284,8.56e-11,64;UBERON:0001017,2.68e-10,73;UBERON:0001049,2.81e-10,52;UBERON:0005068,2.81e-10,52;UBERON:0006241,2.81e-10,52;UBERON:0007135,2.81e-10,52;UBERON:0002020,4.78e-10,34;UBERON:0000073,6.90e-10,54;UBERON:0003056,9.92e-10,49;UBERON:0003080,1.00e-09,40;UBERON:0002780,1.07e-09,39;UBERON:0001890,1.07e-09,39;UBERON:0006240,1.07e-09,39;UBERON:0001016,1.64e-09,75;UBERON:0010371,2.35e-08,73;UBERON:0004121,6.51e-08,95;UBERON:0000924,6.51e-08,95;UBERON:0006601,6.51e-08,95;UBERON:0000955,9.57e-08,47;UBERON:0006238,9.57e-08,47;UBERON:0002616,1.23e-07,46;UBERON:0010314,2.97e-07,92;UBERON:0003528,3.73e-07,29;UBERON:0002791,3.73e-07,29;UBERON:0001893,3.73e-07,29 | |||
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|phase1_expression=0.80074423552397,0.348975407639361,0.454999239389536,0.90739263392049,1.00179145989269,0.503637815735669,0.700837921786577,0.645616617207881,0,0.468129052643987,0.171217968225505,0.159544317990673,0.513602189793617,0.34968160967599,0,0.607425802169478,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,2.38121212422995,1.58865521921416,1.04479915655574,0.319984845586813,0.91763712426868,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.665191531965914,1.90509202037889,0.61506478758457,0,1.73310971850765,0.498703936075477,1.22501613757421,0,0,0,0.588231488031014,0.683045484958446,0.971020706062307,0.251793635951155,0.405507724878058,0.183546752161682,0,0.65407546914134,0.439372365468944,1.36100929351998,1.1198913730029,0,0.503347818173209,0.725362142011344,1.34437519656986,0.257259436035947,0.573066879877513,0,2.22548106945558,0,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,2.43010688997043,1.26194976810829,1.99955689082663,3.75476519617743,1.46988959057945,1.62937300731002,0.919218786610021,1.10115880999389,1.27687338085188,0.768032666281217,2.2420668914133,2.65314166446988,2.08365348222704,0.558365998002762,2.25105044012672,1.06958773443767,4.41942878210502,4.27115042397309,2.98239113320481,0.530083353332288,0.604572480854284,1.73918693221007,0.860423876981386,1.3599426674155,0,0.649776417447669,2.24013443548668,1.26399978118577,0.340860645156116,0.259786004602869,0,1.69012103732017,0,2.54805239706646,0,1.08245520505607,1.26679932737549,2.02209778005913,1.25602267690966,0.517875767294343,0.148442139064825,0.346970653532272,1.52232739156071,1.61430848079241,1.3565037649736,1.05829836422134,0.628332956648377,1.48316980640624,0.433798070759735,0,0.485300549842228,1.54589062922275,0,0,0,0.41889341362691,0.510914110417183,0.479260498023681,2.39961092397363,0.635351135365324,1.19832511523858,32.4825428001225,8.04187853522332,1.73824320192276,5.11430914660661,2.0778804455956,9.73447578406546,0.916554274652847,0.870848794270651,0.252722758433675,0,1.17108398666433,1.14951052216736,1.0803727788321,0.753524089178575,1.76894897793452,1.66547836370305,1.68663104207512,1.29351685369508,1.29340795759705,1.51284864134255,0.879755620819744,1.7535658594206,1.94633074457919,0.696504333044333,0.411564272815887,0.796137067273973,0.702213187313235,1.28673953557358,1.42081749697796,0.207125772535502,0.938104239924385,0.900310307305074,1.42046841351126,0.590292695242212,1.3884040159864,1.16266972375204,0.536546802799238,1.16765342367169,0.987359099480883,1.31333971263276,1.37816976227955,0.730999937126662,1.09775057645525,1.07365135008297,1.68231958851302,4.21908910755066,0.991256348951394,1.05780226665418,2.13288250535234,0.696710015581316,1.54640953586512,0.605050573870028,2.00140239460383,1.52180500890047,0.474529061544512,0.823494773620054,1.00534083520108,0.795825888164603,2.33956904542944,0.898819408654221,0.216138049874694,0.995706366271836,1.70701110857774,2.39921876480431,0,1.01825663922657,0.581857461502877,1.75339549725796,1.20149420536089,0.885660887877613,0.627994911365499,0.740382983530803,1.77871576252289,1.16791574001266,1.37591296579242,0.674586337154561,1.01430060694251,0.482354319504834,1.01850340712568,0.863088412352432,0.972811360650212,1.37280706594041,2.87536413054709,2.60498663367952,2.80833905803104,2.27320990152401,1.97337154874103,2.8946611281802,0.184753190166605,1.89491411770485,1.14075483509418,0.848725428875941,0.234690248288502,0.837531287209079,0.238043640886014,0.585400943573396,1.57635144106191,1.32878813789265,0.797273843287435,0.81931657357869,0.690739927463582,0.723245292907558,0,0,0.491764273019036,0,0.963303539926752,1.99259867206745,1.14754461763673,1.26235463602186,0.631016438832513,1.95219372148319,1.93881057959519,1.19484398976276,2.00518806674155,1.98153571552183,1.21443210502468,2.92255857911312,1.18586333383957,1.28528526568723,1.84522110770749,1.06839362200353,1.30309567482861,0.494910368917606,0,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,0,1.29214146584111,0.363533729477506,0,0.316036757935816,0,0,1.02131881726136,1.98067203434441,1.29358683782755,2.14337035031592,1.95074257006501,0.713475270408282,2.13913726782757,1.522324745573,1.64270195644597,0,0.441056796109924,0.16488625294148,0.807322133479528,0.542816324353403,1.19372344003136,0.492422699235184,0.291480836629851,1.11255181206306,0.512612642393558,0.82554747185289,0.925972636848558,0.565105371014073,0.27338845544205,0.457556346413045,0.339956859987711,0.839708713941948,0.967399816630967,0.954670618015114,1.89801596148681,0.406638934253697,0.756037385752609,2.09088296014469,1.09181281873089,0.944050424693745,1.40510874733071,0.26175594198403,0.259229946583586,0,6.20062232552609,1.79419855252775,0.66183396182839,1.16670713006429,1.54991788173277,1.520605129417,1.40828686374905,1.8228613878153,3.77493639932559,4.34851417486811,6.62469014393091,0.632022241256357,1.21635129174099,0.924398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| ||
|short_description=p6@Tomm70a | |short_description=p6@Tomm70a | ||
}} | }} |
Latest revision as of 16:30, 25 September 2015
Short description: | p6@Tomm70a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tomm70a_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -227bp_to_ENSMUST00000166897, NM_138599, uc007zmz.1_5end |
EntrezGene: | Tomm70a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 8.56e-11 | 64 |
neural plate | 8.56e-11 | 64 |
presumptive neural plate | 8.56e-11 | 64 |
central nervous system | 2.68e-10 | 73 |
neural tube | 2.81e-10 | 52 |
neural rod | 2.81e-10 | 52 |
future spinal cord | 2.81e-10 | 52 |
neural keel | 2.81e-10 | 52 |
gray matter | 4.78e-10 | 34 |
regional part of nervous system | 6.90e-10 | 54 |
pre-chordal neural plate | 9.92e-10 | 49 |
anterior neural tube | 1.00e-09 | 40 |
regional part of forebrain | 1.07e-09 | 39 |
forebrain | 1.07e-09 | 39 |
future forebrain | 1.07e-09 | 39 |
nervous system | 1.64e-09 | 75 |
ecto-epithelium | 2.35e-08 | 73 |
ectoderm-derived structure | 6.51e-08 | 95 |
ectoderm | 6.51e-08 | 95 |
presumptive ectoderm | 6.51e-08 | 95 |
brain | 9.57e-08 | 47 |
future brain | 9.57e-08 | 47 |
regional part of brain | 1.23e-07 | 46 |
structure with developmental contribution from neural crest | 2.97e-07 | 92 |
brain grey matter | 3.73e-07 | 29 |
regional part of telencephalon | 3.73e-07 | 29 |
telencephalon | 3.73e-07 | 29 |