FFCP PHASE1:Mm9::chr7:112717796..112717829,-: Difference between revisions
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{{FFCP|EntrezGene=11785|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=0bp_to_uc009iyk.1_5end|description=CAGE_peak_3_at_Apbb1_5end|id=chr7:112717796..112717829,-|ontology_enrichment_celltype=CL:0000117!3.60e-16!23;CL:0000337!3.60e-16!23;CL:0002319!4.90e-13!43;CL:0000221!1.89e-12!44;CL:0000133!1.89e-12!44;CL:0000540!9.96e-12!33;CL:0000047!9.96e-12!33;CL:0000031!9.96e-12!33;CL:0000404!9.96e-12!33;CL:0000055!1.74e-09!50;CL:0000393!2.12e-08!39;CL:0000211!2.12e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,8.28e-22,23;CL:0000337,8.28e-22,23;CL:0000540,2.66e-13,33;CL:0000047,2.66e-13,33;CL:0000031,2.66e-13,33;CL:0000404,2.66e-13,33;CL:0002319,5.41e-12,43;CL:0000221,1.44e-11,44;CL:0000133,1.44e-11,44;CL:0000393,2.42e-10,39;CL:0000211,2.42e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.17e-35!75;UBERON:0001016!3.17e-35!75;UBERON:0001017!4.22e-35!73;UBERON:0005743!4.22e-35!73;UBERON:0001049!6.85e-34!52;UBERON:0005068!6.85e-34!52;UBERON:0006241!6.85e-34!52;UBERON:0007135!6.85e-34!52;UBERON:0002346!2.02e-32!71;UBERON:0003075!2.02e-32!71;UBERON:0007284!2.02e-32!71;UBERON:0000955!2.43e-32!50;UBERON:0006238!2.43e-32!50;UBERON:0002616!1.40e-31!49;UBERON:0000033!1.06e-29!63;UBERON:0004121!1.87e-28!102;UBERON:0000924!1.87e-28!102;UBERON:0006601!1.87e-28!102;UBERON:0003056!1.41e-27!49;UBERON:0003080!8.11e-27!40;UBERON:0002020!1.93e-26!34;UBERON:0002780!4.55e-26!39;UBERON:0001890!4.55e-26!39;UBERON:0006240!4.55e-26!39;UBERON:0002791!9.26e-23!29;UBERON:0003528!9.26e-23!29;UBERON:0001893!9.26e-23!29;UBERON:0000956!1.43e-16!21;UBERON:0001869!1.43e-16!21;UBERON:0000203!1.43e-16!21;UBERON:0007811!1.03e-15!86;UBERON:0002619!5.22e-14!17;UBERON:0000153!1.27e-12!94;UBERON:0002021!2.51e-10!10;UBERON:0000411!2.51e-10!10;UBERON:0001950!2.51e-10!10;UBERON:0003076!2.20e-07!12;UBERON:0003057!2.20e-07!12;UBERON:0002420!2.60e-07!8;UBERON:0007245!2.60e-07!8;UBERON:0010009!2.60e-07!8;UBERON:0010011!2.60e-07!8;UBERON:0000454!2.60e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.47e-39,54;UBERON:0001049,5.33e-37,52;UBERON:0005068,5.33e-37,52;UBERON:0006241,5.33e-37,52;UBERON:0007135,5.33e-37,52;UBERON:0002020,2.03e-36,34;UBERON:0001017,9.27e-36,73;UBERON:0001016,1.98e-34,75;UBERON:0000955,1.15e-32,47;UBERON:0006238,1.15e-32,47;UBERON:0003528,2.13e-32,29;UBERON:0002791,2.13e-32,29;UBERON:0001893,2.13e-32,29;UBERON:0002616,1.56e-31,46;UBERON:0002346,2.93e-29,64;UBERON:0003075,2.93e-29,64;UBERON:0007284,2.93e-29,64;UBERON:0003080,3.67e-27,40;UBERON:0002780,4.89e-26,39;UBERON:0001890,4.89e-26,39;UBERON:0006240,4.89e-26,39;UBERON:0004121,1.88e-25,95;UBERON:0000924,1.88e-25,95;UBERON:0006601,1.88e-25,95;UBERON:0010371,4.09e-24,73;UBERON:0000956,2.56e-22,21;UBERON:0001869,2.56e-22,21;UBERON:0000203,2.56e-22,21;UBERON:0003056,7.41e-22,49;UBERON:0002619,4.18e-18,17;UBERON:0010314,1.29e-16,92;UBERON:0002021,5.78e-16,10;UBERON:0000411,5.78e-16,10;UBERON:0001950,5.78e-16,10;UBERON:0002420,5.10e-11,8;UBERON:0007245,5.10e-11,8;UBERON:0010009,5.10e-11,8;UBERON:0010011,5.10e-11,8;UBERON:0000454,5.10e-11,8;UBERON:0000025,2.04e-10,114;UBERON:0003076,7.10e-10,12;UBERON:0003057,7.10e-10,12;UBERON:0004111,5.15e-09,122;UBERON:0000369,2.16e-07,5;UBERON:0002435,2.16e-07,5;UBERON:0000204,2.16e-07,5;UBERON:0010082,2.16e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.5378032791413,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0,0,0,2.83243045203437,4.7609188134483,1.90149421051854,0,0,0,0,0,0.599200221036809,0,1.8664130215526,2.8351247049655,1.26194976810829,7.14127461009509,7.28866185140325,2.44981598429908,1.82106394934649,0.919218786610021,4.40463523997555,3.57524546638526,4.6081959976873,4.3522474950964,5.94669683415663,3.12548022334056,4.18774498502071,7.87867654044352,6.72312290217964,5.30331453852602,7.68807076315156,0.931997229126503,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,4.68449275218475,3.56059401582874,0,0,0,0,3.59497534571574,9.60751265919116,5.52879149296603,23.8139318663419,18.6672283851141,7.68815764870372,8.27430441645564,0,0,0,0.631325567659422,0,1.37941262660084,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.843315521037559,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,17.0334858336943,5.9684675179985,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.87538698547525,0,0,0,0.390438744296638,0.646270193198397,0,0.445597348164788,0.283076530788832,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0.680879211507576,0.540183282093931,0.129358683782755,0.643011105094777,0.532020700926821,0.713475270408282,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,3.94585057078933,0,0,0,0,0,0,0,0,0.966336483304024,1.72818003754719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4605700194485,14.7304075682297,20.6242384838183,10.8267504876523,27.4033007908257,27.1941803060292,20.925697507186,19.3638117386415,21.7508356312418,19.6748918465692,0.207574695168353,0,0.341467211508268,0.972426868273176,0.628839487883947,1.2869045591501,0.44449345560323,1.03017528619447,0.962757628775446,0.252697211763798,1.01391719956096,0.565879024158229,0.936415074698824,0.960377286073039,1.09127391015665,1.42888107384922,0.579421629724277,0.77163688185482,0.412085900803307,1.03039244094078,1.02860775715625,1.4198064492747,1.90748951957857,1.16277133305863,0.282328141245992,1.09998990259179,0.914639864363863,0.263069711437843,0.407412341537585,0.561142271657738,1.06771516311757,0.689531376628944,2.04615521584845,0.464810523557898,1.15743966588685,2.74791635731741,0.701794825336225,1.28922632428979,0,0.882365676478062,0|short_description=p3@Apbb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11785 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc009iyk.1_5end | |||
|cluster_id=chr7:112717796..112717829,- | |||
|description=CAGE_peak_3_at_Apbb1_5end | |||
|id=chr7:112717796..112717829,- | |||
|ontology_enrichment_celltype=CL:0000117!3.60e-16!23;CL:0000337!3.60e-16!23;CL:0002319!4.90e-13!43;CL:0000221!1.89e-12!44;CL:0000133!1.89e-12!44;CL:0000540!9.96e-12!33;CL:0000047!9.96e-12!33;CL:0000031!9.96e-12!33;CL:0000404!9.96e-12!33;CL:0000055!1.74e-09!50;CL:0000393!2.12e-08!39;CL:0000211!2.12e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.28e-22,23;CL:0000337,8.28e-22,23;CL:0000540,2.66e-13,33;CL:0000047,2.66e-13,33;CL:0000031,2.66e-13,33;CL:0000404,2.66e-13,33;CL:0002319,5.41e-12,43;CL:0000221,1.44e-11,44;CL:0000133,1.44e-11,44;CL:0000393,2.42e-10,39;CL:0000211,2.42e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.17e-35!75;UBERON:0001016!3.17e-35!75;UBERON:0001017!4.22e-35!73;UBERON:0005743!4.22e-35!73;UBERON:0001049!6.85e-34!52;UBERON:0005068!6.85e-34!52;UBERON:0006241!6.85e-34!52;UBERON:0007135!6.85e-34!52;UBERON:0002346!2.02e-32!71;UBERON:0003075!2.02e-32!71;UBERON:0007284!2.02e-32!71;UBERON:0000955!2.43e-32!50;UBERON:0006238!2.43e-32!50;UBERON:0002616!1.40e-31!49;UBERON:0000033!1.06e-29!63;UBERON:0004121!1.87e-28!102;UBERON:0000924!1.87e-28!102;UBERON:0006601!1.87e-28!102;UBERON:0003056!1.41e-27!49;UBERON:0003080!8.11e-27!40;UBERON:0002020!1.93e-26!34;UBERON:0002780!4.55e-26!39;UBERON:0001890!4.55e-26!39;UBERON:0006240!4.55e-26!39;UBERON:0002791!9.26e-23!29;UBERON:0003528!9.26e-23!29;UBERON:0001893!9.26e-23!29;UBERON:0000956!1.43e-16!21;UBERON:0001869!1.43e-16!21;UBERON:0000203!1.43e-16!21;UBERON:0007811!1.03e-15!86;UBERON:0002619!5.22e-14!17;UBERON:0000153!1.27e-12!94;UBERON:0002021!2.51e-10!10;UBERON:0000411!2.51e-10!10;UBERON:0001950!2.51e-10!10;UBERON:0003076!2.20e-07!12;UBERON:0003057!2.20e-07!12;UBERON:0002420!2.60e-07!8;UBERON:0007245!2.60e-07!8;UBERON:0010009!2.60e-07!8;UBERON:0010011!2.60e-07!8;UBERON:0000454!2.60e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.47e-39,54;UBERON:0001049,5.33e-37,52;UBERON:0005068,5.33e-37,52;UBERON:0006241,5.33e-37,52;UBERON:0007135,5.33e-37,52;UBERON:0002020,2.03e-36,34;UBERON:0001017,9.27e-36,73;UBERON:0001016,1.98e-34,75;UBERON:0000955,1.15e-32,47;UBERON:0006238,1.15e-32,47;UBERON:0003528,2.13e-32,29;UBERON:0002791,2.13e-32,29;UBERON:0001893,2.13e-32,29;UBERON:0002616,1.56e-31,46;UBERON:0002346,2.93e-29,64;UBERON:0003075,2.93e-29,64;UBERON:0007284,2.93e-29,64;UBERON:0003080,3.67e-27,40;UBERON:0002780,4.89e-26,39;UBERON:0001890,4.89e-26,39;UBERON:0006240,4.89e-26,39;UBERON:0004121,1.88e-25,95;UBERON:0000924,1.88e-25,95;UBERON:0006601,1.88e-25,95;UBERON:0010371,4.09e-24,73;UBERON:0000956,2.56e-22,21;UBERON:0001869,2.56e-22,21;UBERON:0000203,2.56e-22,21;UBERON:0003056,7.41e-22,49;UBERON:0002619,4.18e-18,17;UBERON:0010314,1.29e-16,92;UBERON:0002021,5.78e-16,10;UBERON:0000411,5.78e-16,10;UBERON:0001950,5.78e-16,10;UBERON:0002420,5.10e-11,8;UBERON:0007245,5.10e-11,8;UBERON:0010009,5.10e-11,8;UBERON:0010011,5.10e-11,8;UBERON:0000454,5.10e-11,8;UBERON:0000025,2.04e-10,114;UBERON:0003076,7.10e-10,12;UBERON:0003057,7.10e-10,12;UBERON:0004111,5.15e-09,122;UBERON:0000369,2.16e-07,5;UBERON:0002435,2.16e-07,5;UBERON:0000204,2.16e-07,5;UBERON:0010082,2.16e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.5378032791413,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0,0,0,2.83243045203437,4.7609188134483,1.90149421051854,0,0,0,0,0,0.599200221036809,0,1.8664130215526,2.8351247049655,1.26194976810829,7.14127461009509,7.28866185140325,2.44981598429908,1.82106394934649,0.919218786610021,4.40463523997555,3.57524546638526,4.6081959976873,4.3522474950964,5.94669683415663,3.12548022334056,4.18774498502071,7.87867654044352,6.72312290217964,5.30331453852602,7.68807076315156,0.931997229126503,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,4.68449275218475,3.56059401582874,0,0,0,0,3.59497534571574,9.60751265919116,5.52879149296603,23.8139318663419,18.6672283851141,7.68815764870372,8.27430441645564,0,0,0,0.631325567659422,0,1.37941262660084,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.843315521037559,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,17.0334858336943,5.9684675179985,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.87538698547525,0,0,0,0.390438744296638,0.646270193198397,0,0.445597348164788,0.283076530788832,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0.680879211507576,0.540183282093931,0.129358683782755,0.643011105094777,0.532020700926821,0.713475270408282,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,3.94585057078933,0,0,0,0,0,0,0,0,0.966336483304024,1.72818003754719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4605700194485,14.7304075682297,20.6242384838183,10.8267504876523,27.4033007908257,27.1941803060292,20.925697507186,19.3638117386415,21.7508356312418,19.6748918465692,0.207574695168353,0,0.341467211508268,0.972426868273176,0.628839487883947,1.2869045591501,0.44449345560323,1.03017528619447,0.962757628775446,0.252697211763798,1.01391719956096,0.565879024158229,0.936415074698824,0.960377286073039,1.09127391015665,1.42888107384922,0.579421629724277,0.77163688185482,0.412085900803307,1.03039244094078,1.02860775715625,1.4198064492747,1.90748951957857,1.16277133305863,0.282328141245992,1.09998990259179,0.914639864363863,0.263069711437843,0.407412341537585,0.561142271657738,1.06771516311757,0.689531376628944,2.04615521584845,0.464810523557898,1.15743966588685,2.74791635731741,0.701794825336225,1.28922632428979,0,0.882365676478062,0 | |||
|short_description=p3@Apbb1 | |||
}} |
Latest revision as of 16:29, 25 September 2015
Short description: | p3@Apbb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Apbb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_uc009iyk.1_5end |
EntrezGene: | Apbb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.28e-22 | 23 |
neuroblast (sensu Vertebrata) | 8.28e-22 | 23 |
neuron | 2.66e-13 | 33 |
neuronal stem cell | 2.66e-13 | 33 |
neuroblast | 2.66e-13 | 33 |
electrically signaling cell | 2.66e-13 | 33 |
neural cell | 5.41e-12 | 43 |
ectodermal cell | 1.44e-11 | 44 |
neurectodermal cell | 1.44e-11 | 44 |
electrically responsive cell | 2.42e-10 | 39 |
electrically active cell | 2.42e-10 | 39 |