FFCP PHASE1:Mm9::chr5:140858672..140858711,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231834 | |EntrezGene=231834 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U0I9 | |UniProt=Q3U0I9 | ||
|association_with_transcript=0bp_to_ENSMUST00000165960_5end | |association_with_transcript=0bp_to_ENSMUST00000165960_5end | ||
|cluster_id=chr5:140858672..140858711,- | |||
|description=CAGE_peak_5_at_Snx8_5end | |description=CAGE_peak_5_at_Snx8_5end | ||
|id=chr5:140858672..140858711,- | |id=chr5:140858672..140858711,- | ||
|ontology_enrichment_celltype=CL:0000553!1.28e-12!6;CL:0000556!1.28e-12!6;CL:0000050!2.73e-08!9 | |ontology_enrichment_celltype=CL:0000553!1.28e-12!6;CL:0000556!1.28e-12!6;CL:0000050!2.73e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.55e-26,6;CL:0000556,1.55e-26,6;CL:0000945,5.15e-19,1;CL:0000236,5.15e-19,1;CL:0000826,5.15e-19,1;CL:0000050,5.14e-18,9;CL:0000839,9.58e-13,13;CL:0002031,8.53e-12,25;CL:0000763,1.65e-10,16;CL:0000988,2.33e-09,32;CL:0002032,2.33e-09,32;CL:0000037,2.33e-09,32;CL:0000837,2.33e-09,32;CL:0000049,5.65e-09,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.88e-20!48;UBERON:0002390!2.11e-19!45;UBERON:0003061!2.11e-19!45;UBERON:0004177!1.59e-16!29;UBERON:0003081!1.87e-15!88;UBERON:0002405!1.63e-12!70;UBERON:0002370!1.33e-10!23;UBERON:0000974!1.33e-10!23;UBERON:0004807!1.33e-10!23;UBERON:0005058!1.33e-10!23;UBERON:0003351!1.33e-10!23;UBERON:0009113!1.33e-10!23;UBERON:0003295!1.33e-10!23;UBERON:0009722!1.33e-10!23;UBERON:0005562!1.33e-10!23;UBERON:0007690!1.33e-10!23;UBERON:0006562!4.39e-10!24;UBERON:0003408!4.39e-10!24;UBERON:0001557!4.39e-10!24;UBERON:0001042!4.39e-10!24;UBERON:0008814!4.39e-10!24;UBERON:0009145!4.39e-10!24;UBERON:0000072!9.30e-09!27;UBERON:0005057!3.98e-08!51;UBERON:0002106!5.47e-08!6;UBERON:0004457!5.47e-08!6;UBERON:0000042!5.47e-08!6;UBERON:0004854!5.47e-08!6;UBERON:0009034!5.47e-08!6;UBERON:0002095!5.47e-08!6;UBERON:0004782!5.47e-08!6;UBERON:0003281!5.47e-08!6;UBERON:0009664!5.47e-08!6;UBERON:0002296!5.47e-08!6;UBERON:0005602!5.47e-08!6;UBERON:0001179!5.47e-08!6;UBERON:0006293!5.47e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.74e-19,1;UBERON:0001097,7.74e-19,1;UBERON:0003968,7.74e-19,1;UBERON:0001467,7.74e-19,1;UBERON:0002371,1.65e-10,16;UBERON:0001474,7.49e-08,22;UBERON:0004765,7.49e-08,22;UBERON:0001434,7.49e-08,22;UBERON:0002465,3.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,3.62781490161973,3.56497527374921,3.81950686618227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,4.02678254538567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88406825470758,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.185194527369712,0,0.27338845544205,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.25984164595559,0.716106782669926,0.198681354781265,0,0.147689527174577,0,0.228620419965,0.302478555410522,0.584747284438515,0.481059208201647,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,3.62781490161973,3.56497527374921,3.81950686618227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,4.02678254538567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88406825470758,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.185194527369712,0,0.27338845544205,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.25984164595559,0.716106782669926,0.198681354781265,0,0.147689527174577,0,0.228620419965,0.302478555410522,0.584747284438515,0.481059208201647,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Snx8 | |short_description=p5@Snx8 | ||
}} | }} |
Latest revision as of 16:10, 25 September 2015
Short description: | p5@Snx8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Snx8_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 0bp_to_ENSMUST00000165960_5end |
EntrezGene: | Snx8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.55e-26 | 6 |
megakaryocyte | 1.55e-26 | 6 |
lymphocyte of B lineage | 5.15e-19 | 1 |
B cell | 5.15e-19 | 1 |
pro-B cell | 5.15e-19 | 1 |
megakaryocyte-erythroid progenitor cell | 5.14e-18 | 9 |
myeloid lineage restricted progenitor cell | 9.58e-13 | 13 |
hematopoietic lineage restricted progenitor cell | 8.53e-12 | 25 |
myeloid cell | 1.65e-10 | 16 |
hematopoietic cell | 2.33e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.33e-09 | 32 |
hematopoietic stem cell | 2.33e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.33e-09 | 32 |
common myeloid progenitor | 5.65e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.74e-19 | 1 |
axillary lymph node | 7.74e-19 | 1 |
peripheral lymph node | 7.74e-19 | 1 |
shoulder | 7.74e-19 | 1 |
bone marrow | 1.65e-10 | 16 |
bone element | 7.49e-08 | 22 |
skeletal element | 7.49e-08 | 22 |
skeletal system | 7.49e-08 | 22 |
lymphoid system | 3.64e-07 | 3 |