FFCP PHASE1:Mm9::chr7:108570205..108570240,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=207728|HGNC=|MCL_coexpression_id=90|UniProt=Q5PR72,Q3TXZ6,Q922S4|association_with_transcript=0bp_to_ENSMUST00000084894,ENSMUST00000163751,ENSMUST00000166652,NM_001008548,NM_001143848,uc009iop.2,uc009ioq.2,uc012fqk.1_5end|description=CAGE_peak_2_at_Pde2a_5end|id=chr7:108570205..108570240,+|ontology_enrichment_celltype=CL:0000117!2.60e-13!23;CL:0000337!2.60e-13!23;CL:0000540!1.29e-09!33;CL:0000047!1.29e-09!33;CL:0000031!1.29e-09!33;CL:0000404!1.29e-09!33;CL:0000221!7.98e-07!44;CL:0000133!7.98e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.86e-17,23;CL:0000337,3.86e-17,23;CL:0000540,1.78e-10,33;CL:0000047,1.78e-10,33;CL:0000031,1.78e-10,33;CL:0000404,1.78e-10,33;CL:0000393,1.00e-07,39;CL:0000211,1.00e-07,39;CL:0000221,9.22e-07,44;CL:0000133,9.22e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.44e-29!71;UBERON:0003075!1.44e-29!71;UBERON:0007284!1.44e-29!71;UBERON:0000033!2.19e-25!63;UBERON:0001049!1.53e-24!52;UBERON:0005068!1.53e-24!52;UBERON:0006241!1.53e-24!52;UBERON:0007135!1.53e-24!52;UBERON:0000955!5.92e-24!50;UBERON:0006238!5.92e-24!50;UBERON:0000073!7.13e-24!75;UBERON:0001016!7.13e-24!75;UBERON:0001017!1.20e-23!73;UBERON:0005743!1.20e-23!73;UBERON:0004121!1.52e-23!102;UBERON:0000924!1.52e-23!102;UBERON:0006601!1.52e-23!102;UBERON:0003056!2.13e-23!49;UBERON:0002616!3.32e-23!49;UBERON:0003080!2.53e-21!40;UBERON:0002780!1.44e-20!39;UBERON:0001890!1.44e-20!39;UBERON:0006240!1.44e-20!39;UBERON:0002020!4.05e-19!34;UBERON:0002791!1.73e-16!29;UBERON:0003528!1.73e-16!29;UBERON:0001893!1.73e-16!29;UBERON:0007811!3.41e-13!86;UBERON:0000956!2.99e-11!21;UBERON:0001869!2.99e-11!21;UBERON:0000203!2.99e-11!21;UBERON:0000153!1.36e-10!94;UBERON:0002619!4.61e-10!17;UBERON:0002021!3.41e-09!10;UBERON:0000411!3.41e-09!10;UBERON:0001950!3.41e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.14e-32,54;UBERON:0001049,6.08e-30,52;UBERON:0005068,6.08e-30,52;UBERON:0006241,6.08e-30,52;UBERON:0007135,6.08e-30,52;UBERON:0002346,4.18e-29,64;UBERON:0003075,4.18e-29,64;UBERON:0007284,4.18e-29,64;UBERON:0003056,2.67e-27,49;UBERON:0001017,9.24e-27,73;UBERON:0000955,2.24e-26,47;UBERON:0006238,2.24e-26,47;UBERON:0003080,3.41e-26,40;UBERON:0001016,1.57e-25,75;UBERON:0002020,1.84e-25,34;UBERON:0010371,1.84e-25,73;UBERON:0002616,2.02e-25,46;UBERON:0002780,3.32e-25,39;UBERON:0001890,3.32e-25,39;UBERON:0006240,3.32e-25,39;UBERON:0004121,3.47e-23,95;UBERON:0000924,3.47e-23,95;UBERON:0006601,3.47e-23,95;UBERON:0003528,5.79e-22,29;UBERON:0002791,5.79e-22,29;UBERON:0001893,5.79e-22,29;UBERON:0010314,3.50e-21,92;UBERON:0000956,5.62e-15,21;UBERON:0001869,5.62e-15,21;UBERON:0000203,5.62e-15,21;UBERON:0002619,2.01e-13,17;UBERON:0002021,1.11e-11,10;UBERON:0000411,1.11e-11,10;UBERON:0001950,1.11e-11,10;UBERON:0002420,3.44e-08,8;UBERON:0007245,3.44e-08,8;UBERON:0010009,3.44e-08,8;UBERON:0010011,3.44e-08,8;UBERON:0000454,3.44e-08,8|phase1_expression=2.5623815536767,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2227489370415,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06949382578793,5.28990979272033,7.60597684207415,0,0,0,0,0,0,0.768436610643109,1.24427534770173,1.62007125998029,1.89292465216244,4.57041575046086,4.63823935998388,13.4739879136449,14.7602025368084,13.7882817991503,14.3150645299205,12.5133591323484,13.2101618600369,8.04506355154182,6.67859798297591,4.16730696445408,12.0048689570594,25.3243174514256,26.4340968653881,4.41942878210502,4.55589378557129,5.40558392893372,0.530083353332288,0.302286240427142,0,0,0,0,0,0,3.7919993435573,0,0,0,3.66192891419369,0,0,0,0,0,0,2.2836775943812,0.258937883647172,0.148442139064825,1.73485326766136,7.61163695780353,3.68984795609694,4.97384713823654,3.17489509266403,0.376999773989026,0,0,0,0,0,0,0,0.878342391034642,2.30391377494801,0,0,0,0,27.4116870110826,367.830484666176,67.0994240282696,128.629996942285,157.009290800823,60.2585329222724,145.530412971779,0.203678727700633,0.124406970610093,0,0.631325567659422,0.130120442962704,1.83921683546778,1.44049703844279,3.31550599238573,3.06164246180975,3.20284300712124,2.52994656311268,3.10444044886819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0,0,66.8722036433925,9.98174740079059,0,0,0,0,0.38660238396628,0,0.667134131534611,0,0,0.164698954724011,0.502670417600539,0.795825888164603,0.58489226135736,0.898819408654221,0.216138049874694,0.199141273254367,0,0.571242563048644,0,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,9.31193421929193,6.56385444916338,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0,0,22.1711708331047,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0.316036757935816,0,0,2.04263763452273,0.540183282093931,2.19909762430683,1.07168517515796,0.532020700926821,6.0645397984704,11.3538824215463,8.22055362609418,0,0,0.661585194164886,0,0,0,0,0,0,7.04616147639937,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,151.353493821374,130.732367168038,148.952833494243,92.1133057362165,120.574523479633,108.021327326727,114.078802539175,106.72612516414,88.3627697519199,100.963260791605,0.62272408550506,4.78829848081237,3.92687293234509,1.94485373654635,4.40187641518763,2.94149613520023,2.889207461421,3.7086310303001,2.88827288632634,3.79045817645696,3.29523089857312,3.58390048633545,2.62196220915671,1.92075457214608,1.95280594449085,4.28664322154766,2.66533949673168,2.12200142510076,3.29668720642645,4.85756436443511,4.4573002810104,1.95223386775271,3.33810665926249,3.48831399917588,3.29382831453657,4.3153450024755,2.19513567447327,3.6829759601298,3.66671107383827,2.80571135828869,3.6776855618494,3.15214343601803,1.22769312950907,2.63392630016142,3.47231899766054,9.242991383704,2.33931608445408,4.72716318906256,2.67803664896381,0.661774257358546,0.463735671240843|short_description=p2@Pde2a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=207728 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=Q5PR72,Q3TXZ6,Q922S4 | |||
|association_with_transcript=0bp_to_ENSMUST00000084894,ENSMUST00000163751,ENSMUST00000166652,NM_001008548,NM_001143848,uc009iop.2,uc009ioq.2,uc012fqk.1_5end | |||
|cluster_id=chr7:108570205..108570240,+ | |||
|description=CAGE_peak_2_at_Pde2a_5end | |||
|id=chr7:108570205..108570240,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.60e-13!23;CL:0000337!2.60e-13!23;CL:0000540!1.29e-09!33;CL:0000047!1.29e-09!33;CL:0000031!1.29e-09!33;CL:0000404!1.29e-09!33;CL:0000221!7.98e-07!44;CL:0000133!7.98e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.86e-17,23;CL:0000337,3.86e-17,23;CL:0000540,1.78e-10,33;CL:0000047,1.78e-10,33;CL:0000031,1.78e-10,33;CL:0000404,1.78e-10,33;CL:0000393,1.00e-07,39;CL:0000211,1.00e-07,39;CL:0000221,9.22e-07,44;CL:0000133,9.22e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.44e-29!71;UBERON:0003075!1.44e-29!71;UBERON:0007284!1.44e-29!71;UBERON:0000033!2.19e-25!63;UBERON:0001049!1.53e-24!52;UBERON:0005068!1.53e-24!52;UBERON:0006241!1.53e-24!52;UBERON:0007135!1.53e-24!52;UBERON:0000955!5.92e-24!50;UBERON:0006238!5.92e-24!50;UBERON:0000073!7.13e-24!75;UBERON:0001016!7.13e-24!75;UBERON:0001017!1.20e-23!73;UBERON:0005743!1.20e-23!73;UBERON:0004121!1.52e-23!102;UBERON:0000924!1.52e-23!102;UBERON:0006601!1.52e-23!102;UBERON:0003056!2.13e-23!49;UBERON:0002616!3.32e-23!49;UBERON:0003080!2.53e-21!40;UBERON:0002780!1.44e-20!39;UBERON:0001890!1.44e-20!39;UBERON:0006240!1.44e-20!39;UBERON:0002020!4.05e-19!34;UBERON:0002791!1.73e-16!29;UBERON:0003528!1.73e-16!29;UBERON:0001893!1.73e-16!29;UBERON:0007811!3.41e-13!86;UBERON:0000956!2.99e-11!21;UBERON:0001869!2.99e-11!21;UBERON:0000203!2.99e-11!21;UBERON:0000153!1.36e-10!94;UBERON:0002619!4.61e-10!17;UBERON:0002021!3.41e-09!10;UBERON:0000411!3.41e-09!10;UBERON:0001950!3.41e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.14e-32,54;UBERON:0001049,6.08e-30,52;UBERON:0005068,6.08e-30,52;UBERON:0006241,6.08e-30,52;UBERON:0007135,6.08e-30,52;UBERON:0002346,4.18e-29,64;UBERON:0003075,4.18e-29,64;UBERON:0007284,4.18e-29,64;UBERON:0003056,2.67e-27,49;UBERON:0001017,9.24e-27,73;UBERON:0000955,2.24e-26,47;UBERON:0006238,2.24e-26,47;UBERON:0003080,3.41e-26,40;UBERON:0001016,1.57e-25,75;UBERON:0002020,1.84e-25,34;UBERON:0010371,1.84e-25,73;UBERON:0002616,2.02e-25,46;UBERON:0002780,3.32e-25,39;UBERON:0001890,3.32e-25,39;UBERON:0006240,3.32e-25,39;UBERON:0004121,3.47e-23,95;UBERON:0000924,3.47e-23,95;UBERON:0006601,3.47e-23,95;UBERON:0003528,5.79e-22,29;UBERON:0002791,5.79e-22,29;UBERON:0001893,5.79e-22,29;UBERON:0010314,3.50e-21,92;UBERON:0000956,5.62e-15,21;UBERON:0001869,5.62e-15,21;UBERON:0000203,5.62e-15,21;UBERON:0002619,2.01e-13,17;UBERON:0002021,1.11e-11,10;UBERON:0000411,1.11e-11,10;UBERON:0001950,1.11e-11,10;UBERON:0002420,3.44e-08,8;UBERON:0007245,3.44e-08,8;UBERON:0010009,3.44e-08,8;UBERON:0010011,3.44e-08,8;UBERON:0000454,3.44e-08,8 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2227489370415,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06949382578793,5.28990979272033,7.60597684207415,0,0,0,0,0,0,0.768436610643109,1.24427534770173,1.62007125998029,1.89292465216244,4.57041575046086,4.63823935998388,13.4739879136449,14.7602025368084,13.7882817991503,14.3150645299205,12.5133591323484,13.2101618600369,8.04506355154182,6.67859798297591,4.16730696445408,12.0048689570594,25.3243174514256,26.4340968653881,4.41942878210502,4.55589378557129,5.40558392893372,0.530083353332288,0.302286240427142,0,0,0,0,0,0,3.7919993435573,0,0,0,3.66192891419369,0,0,0,0,0,0,2.2836775943812,0.258937883647172,0.148442139064825,1.73485326766136,7.61163695780353,3.68984795609694,4.97384713823654,3.17489509266403,0.376999773989026,0,0,0,0,0,0,0,0.878342391034642,2.30391377494801,0,0,0,0,27.4116870110826,367.830484666176,67.0994240282696,128.629996942285,157.009290800823,60.2585329222724,145.530412971779,0.203678727700633,0.124406970610093,0,0.631325567659422,0.130120442962704,1.83921683546778,1.44049703844279,3.31550599238573,3.06164246180975,3.20284300712124,2.52994656311268,3.10444044886819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0,0,66.8722036433925,9.98174740079059,0,0,0,0,0.38660238396628,0,0.667134131534611,0,0,0.164698954724011,0.502670417600539,0.795825888164603,0.58489226135736,0.898819408654221,0.216138049874694,0.199141273254367,0,0.571242563048644,0,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,9.31193421929193,6.56385444916338,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0,0,22.1711708331047,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0.316036757935816,0,0,2.04263763452273,0.540183282093931,2.19909762430683,1.07168517515796,0.532020700926821,6.0645397984704,11.3538824215463,8.22055362609418,0,0,0.661585194164886,0,0,0,0,0,0,7.04616147639937,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,151.353493821374,130.732367168038,148.952833494243,92.1133057362165,120.574523479633,108.021327326727,114.078802539175,106.72612516414,88.3627697519199,100.963260791605,0.62272408550506,4.78829848081237,3.92687293234509,1.94485373654635,4.40187641518763,2.94149613520023,2.889207461421,3.7086310303001,2.88827288632634,3.79045817645696,3.29523089857312,3.58390048633545,2.62196220915671,1.92075457214608,1.95280594449085,4.28664322154766,2.66533949673168,2.12200142510076,3.29668720642645,4.85756436443511,4.4573002810104,1.95223386775271,3.33810665926249,3.48831399917588,3.29382831453657,4.3153450024755,2.19513567447327,3.6829759601298,3.66671107383827,2.80571135828869,3.6776855618494,3.15214343601803,1.22769312950907,2.63392630016142,3.47231899766054,9.242991383704,2.33931608445408,4.72716318906256,2.67803664896381,0.661774257358546,0.463735671240843 | |||
|short_description=p2@Pde2a | |||
}} |
Latest revision as of 15:23, 25 September 2015
Short description: | p2@Pde2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pde2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 0bp_to_ENSMUST00000084894, ENSMUST00000163751, ENSMUST00000166652, NM_001008548, NM_001143848, uc009iop.2, uc009ioq.2, uc012fqk.1_5end |
EntrezGene: | Pde2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.86e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.86e-17 | 23 |
neuron | 1.78e-10 | 33 |
neuronal stem cell | 1.78e-10 | 33 |
neuroblast | 1.78e-10 | 33 |
electrically signaling cell | 1.78e-10 | 33 |
electrically responsive cell | 1.00e-07 | 39 |
electrically active cell | 1.00e-07 | 39 |
ectodermal cell | 9.22e-07 | 44 |
neurectodermal cell | 9.22e-07 | 44 |