FFCP PHASE1:Mm9::chr5:138277438..138277461,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231805 | |EntrezGene=231805 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q2YFS3 | |UniProt=Q2YFS3 | ||
|association_with_transcript=17bp_to_ENSMUST00000110980,uc009aeb.2_5end | |association_with_transcript=17bp_to_ENSMUST00000110980,uc009aeb.2_5end | ||
|cluster_id=chr5:138277438..138277461,- | |||
|description=CAGE_peak_1_at_Pilra_5end | |description=CAGE_peak_1_at_Pilra_5end | ||
|id=chr5:138277438..138277461,- | |id=chr5:138277438..138277461,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.82e-08,6;CL:0000556,1.82e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.93e-07!193;UBERON:0004120!1.93e-07!193;UBERON:0006603!1.93e-07!193;UBERON:0009569!4.67e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.72e-11,22;UBERON:0004765,3.72e-11,22;UBERON:0001434,3.72e-11,22;UBERON:0002204,9.39e-11,32;UBERON:0002371,6.08e-10,16;UBERON:0002106,1.62e-09,6;UBERON:0004457,1.62e-09,6;UBERON:0000042,1.62e-09,6;UBERON:0004854,1.62e-09,6;UBERON:0009034,1.62e-09,6;UBERON:0002095,1.62e-09,6;UBERON:0004782,1.62e-09,6;UBERON:0003281,1.62e-09,6;UBERON:0009664,1.62e-09,6;UBERON:0002296,1.62e-09,6;UBERON:0005602,1.62e-09,6;UBERON:0001179,1.62e-09,6;UBERON:0006293,1.62e-09,6;UBERON:0009569,1.95e-09,66;UBERON:0002100,6.65e-09,90;UBERON:0005177,1.67e-07,79;UBERON:0003887,3.04e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66420737997229,2.63217847606774,1.39912375625629,2.05050407482854,1.91960207048034,3.39511721438424,0.340173160604279,0.595745707205312,0.783599367416806,0.319984845586813,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,128.070679005494,75.7895284188086,90.5696077074671,161.763659208529,131.144733112022,123.319629669913,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0.202316460859598,0,0,0,0,12.5985960419396,6.92206453796882,7.8152812644071,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,2.58127163094416,0,0,0,0,1.68533304158102,0,1.03914401841148,0.70667914902068,0,0,0,0,0,0,0,0.5709193985953,4.40194402200192,1.03909497345377,0,0,0.691846491768175,0.150722640552623,0.352766121407114,0.125666591329675,0,1.87979163995885,9.73071607144862,0.161766849947409,3.75430581382669,1.93950101254089,0,0,0.209446706813455,0.510914110417183,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,4.97627882440372,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0.284163499395593,0,0.234526059981096,0.180062061461015,1.18372367792605,0.787056926989615,0.462801338662135,0.465067889500816,0.268273401399619,0.116765342367169,0.493679549740441,0.492502392237286,0.324275238183423,0.146199987425332,2.41505126820156,0.402619256281115,0,0,0.330418782983798,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.760902504450237,0.949058123089023,0.164698954724011,1.00534083520108,0.994782360205754,0.58489226135736,1.79763881730844,1.51296634912286,1.59313018603494,0.379335801906163,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0.156998727841375,0.246794327843601,2.37162101669719,0.166845105716094,0.393117990226406,0.674586337154561,1.01430060694251,0.72353147925725,2.03700681425136,3.74004978686054,1.78348749452539,4.3929826110093,0,8.55924179637558,2.18426371180192,1.51547326768267,1.61457672169721,0.482443521363367,3.51031061316549,0,0.162964976442026,0.169745085775188,0.234690248288502,1.34005005953453,0.952174563544055,1.17080188714679,2.04925687338048,1.99318220683897,0.956728611944923,2.78567635016755,3.45369963731791,2.4590339958857,3.01582567878545,23.9318500880232,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,1.8962205476149,0,0,0,0,0,0,0,0,0.164549020602121,0,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,1.29171541356724,0.241251699712623,0.119372344003136,0.492422699235184,0.291480836629851,0.18542530201051,8.37267315909478,1.857481811669,4.62986318424279,3.95573759709851,2.59719032669948,6.86334519619568,0,0.139951452323658,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.404593039154462,0.661227645802687,0.785267825952089,0.259229946583586,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0,0,0,0.288030006257865,0.632022241256357,0,0.205421914329655,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.201652370273681,0.194915761479505,0.673482891482306,0.350630706544707,0.453460767230423,0,0,0,0.772758376128762,0.375364950902364,0.36630324853453,1.2862102744744,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.280924522409647,0.448176066834085,0.804096565378586,0.476293691283074,0.695305955669133,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0,0.476872379894642,0.290692833264657,0.282328141245992,0.676916863133412,0.365855945745545,0.526139422875686,0.950628796921032,0.561142271657738,0.474540072496697,0.394017929502254,0,0.619747364743864,0.385813221962283,0,0.467863216890817,1.71896843238639,0.765153328275374,1.54413993383661,1.62307484934295 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66420737997229,2.63217847606774,1.39912375625629,2.05050407482854,1.91960207048034,3.39511721438424,0.340173160604279,0.595745707205312,0.783599367416806,0.319984845586813,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,128.070679005494,75.7895284188086,90.5696077074671,161.763659208529,131.144733112022,123.319629669913,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0.202316460859598,0,0,0,0,12.5985960419396,6.92206453796882,7.8152812644071,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,2.58127163094416,0,0,0,0,1.68533304158102,0,1.03914401841148,0.70667914902068,0,0,0,0,0,0,0,0.5709193985953,4.40194402200192,1.03909497345377,0,0,0.691846491768175,0.150722640552623,0.352766121407114,0.125666591329675,0,1.87979163995885,9.73071607144862,0.161766849947409,3.75430581382669,1.93950101254089,0,0,0.209446706813455,0.510914110417183,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,4.97627882440372,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0.284163499395593,0,0.234526059981096,0.180062061461015,1.18372367792605,0.787056926989615,0.462801338662135,0.465067889500816,0.268273401399619,0.116765342367169,0.493679549740441,0.492502392237286,0.324275238183423,0.146199987425332,2.41505126820156,0.402619256281115,0,0,0.330418782983798,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.760902504450237,0.949058123089023,0.164698954724011,1.00534083520108,0.994782360205754,0.58489226135736,1.79763881730844,1.51296634912286,1.59313018603494,0.379335801906163,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0.156998727841375,0.246794327843601,2.37162101669719,0.166845105716094,0.393117990226406,0.674586337154561,1.01430060694251,0.72353147925725,2.03700681425136,3.74004978686054,1.78348749452539,4.3929826110093,0,8.55924179637558,2.18426371180192,1.51547326768267,1.61457672169721,0.482443521363367,3.51031061316549,0,0.162964976442026,0.169745085775188,0.234690248288502,1.34005005953453,0.952174563544055,1.17080188714679,2.04925687338048,1.99318220683897,0.956728611944923,2.78567635016755,3.45369963731791,2.4590339958857,3.01582567878545,23.9318500880232,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,1.8962205476149,0,0,0,0,0,0,0,0,0.164549020602121,0,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,1.29171541356724,0.241251699712623,0.119372344003136,0.492422699235184,0.291480836629851,0.18542530201051,8.37267315909478,1.857481811669,4.62986318424279,3.95573759709851,2.59719032669948,6.86334519619568,0,0.139951452323658,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.404593039154462,0.661227645802687,0.785267825952089,0.259229946583586,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0,0,0,0.288030006257865,0.632022241256357,0,0.205421914329655,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.201652370273681,0.194915761479505,0.673482891482306,0.350630706544707,0.453460767230423,0,0,0,0.772758376128762,0.375364950902364,0.36630324853453,1.2862102744744,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.280924522409647,0.448176066834085,0.804096565378586,0.476293691283074,0.695305955669133,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0,0.476872379894642,0.290692833264657,0.282328141245992,0.676916863133412,0.365855945745545,0.526139422875686,0.950628796921032,0.561142271657738,0.474540072496697,0.394017929502254,0,0.619747364743864,0.385813221962283,0,0.467863216890817,1.71896843238639,0.765153328275374,1.54413993383661,1.62307484934295 | ||
|short_description=p1@Pilra | |short_description=p1@Pilra | ||
}} | }} |
Latest revision as of 15:09, 25 September 2015
Short description: | p1@Pilra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pilra_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 17bp_to_ENSMUST00000110980, uc009aeb.2_5end |
EntrezGene: | Pilra |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.82e-08 | 6 |
megakaryocyte | 1.82e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.72e-11 | 22 |
skeletal element | 3.72e-11 | 22 |
skeletal system | 3.72e-11 | 22 |
musculoskeletal system | 9.39e-11 | 32 |
bone marrow | 6.08e-10 | 16 |
spleen | 1.62e-09 | 6 |
cavity lining | 1.62e-09 | 6 |
serous membrane | 1.62e-09 | 6 |
gastrointestinal system mesentery | 1.62e-09 | 6 |
stomach region | 1.62e-09 | 6 |
mesentery | 1.62e-09 | 6 |
gastrointestinal system serosa | 1.62e-09 | 6 |
mesentery of stomach | 1.62e-09 | 6 |
gut mesentery | 1.62e-09 | 6 |
dorsal mesentery | 1.62e-09 | 6 |
dorsal mesogastrium | 1.62e-09 | 6 |
peritoneal cavity | 1.62e-09 | 6 |
spleen primordium | 1.62e-09 | 6 |
subdivision of trunk | 1.95e-09 | 66 |
trunk | 6.65e-09 | 90 |
trunk region element | 1.67e-07 | 79 |
intraembryonic coelom | 3.04e-07 | 10 |