FFCP PHASE1:Mm9::chr19:32313286..32313328,-: Difference between revisions
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{{FFCP|EntrezGene=208449|HGNC=|MCL_coexpression_id=15|UniProt=|association_with_transcript=0bp_to_ENSMUST00000126332,ENSMUST00000149107_5end|description=CAGE_peak_10_at_Sgms1_5end|id=chr19:32313286..32313328,-|ontology_enrichment_celltype=CL:0000050!2.77e-07!9;CL:0000553!4.00e-07!6;CL:0000556!4.00e-07!6|ontology_enrichment_celltype_v019_2=CL:0000050,2.94e-16,9;CL:0000553,4.68e-15,6;CL:0000556,4.68e-15,6;CL:0000049,5.43e-13,19;CL:0000839,8.13e-11,13;CL:0000763,1.59e-08,16;CL:0000988,2.48e-08,32;CL:0002032,2.48e-08,32;CL:0000037,2.48e-08,32;CL:0000837,2.48e-08,32;CL:0002027,2.90e-08,3;CL:0002006,2.90e-08,3;CL:0002024,2.90e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.58e-10,6;UBERON:0004457,1.58e-10,6;UBERON:0000042,1.58e-10,6;UBERON:0004854,1.58e-10,6;UBERON:0009034,1.58e-10,6;UBERON:0002095,1.58e-10,6;UBERON:0004782,1.58e-10,6;UBERON:0003281,1.58e-10,6;UBERON:0009664,1.58e-10,6;UBERON:0002296,1.58e-10,6;UBERON:0005602,1.58e-10,6;UBERON:0001179,1.58e-10,6;UBERON:0006293,1.58e-10,6;UBERON:0005172,3.28e-09,49;UBERON:0005173,3.28e-09,49;UBERON:0002417,3.28e-09,49;UBERON:0000916,3.28e-09,49;UBERON:0002107,3.46e-09,22;UBERON:0007499,3.46e-09,22;UBERON:0006925,3.46e-09,22;UBERON:0009497,3.46e-09,22;UBERON:0000015,3.46e-09,22;UBERON:0002423,3.46e-09,22;UBERON:0006235,3.46e-09,22;UBERON:0008835,3.46e-09,22;UBERON:0003894,3.46e-09,22;UBERON:0004161,3.46e-09,22;UBERON:0008836,3.46e-09,22;UBERON:0009854,1.06e-08,23;UBERON:0009856,1.06e-08,23;UBERON:0003887,1.70e-08,10;UBERON:0002365,7.61e-08,25;UBERON:0002330,7.61e-08,25;UBERON:0001474,1.53e-07,22;UBERON:0004765,1.53e-07,22;UBERON:0001434,1.53e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,7.08663435864391,12.5921138063066,6.78243655520211,7.95263714913285,7.63901373236454,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,1.90509202037889,1.23012957516914,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,10.5703041816374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,6.73238497482646,0.29688427812965,0,0,0.230615497256059,0,0,0,0,0.289198713839823,2.65383165584962,0.808834249737046,2.65009822152472,6.78825354389311,0,0,0,0,3.95389910869537,2.39961092397363,2.54140454146129,0,0,0,0,0,0,0,0,3.11017426525233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.571242563048644,0,0,0,0,0.0632365371242573,0,0,0,0,6.00642380577939,7.07612382407531,11.0182435068578,8.52012509831712,7.71766911207734,5.85639459097266,4.02774592431135,4.86405680325106,1.92192989231657,0,1.11642284300551,0,0,0,0.482443521363367,0.554259570499814,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0.164970122972535,0,0.728341908464944,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,6.83483523191411,0.412773735926445,3.70389054739423,10.360265135258,9.97867862363484,6.40578884978263,2.71965487990169,2.6590775941495,2.48759952847963,0,0,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.853668028770671,1.45864030240976,1.04806581313991,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.561849044819294,0.832326981263301,0.34461281373368,0.476293691283074,0.695305955669133,0.578727661391115,0.412085900803307,1.03039244094078,0.685738504770831,0.354951612318675,0.715308569841963,0.290692833264657,0.658765662907314,1.09998990259179,0,0.789209134313529,0.679020569229309,0,0.711810108745045,0.591026894253381,0.409231043169689,0.77468420592983,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0.927471342481686|short_description=p10@Sgms1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=208449 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000126332,ENSMUST00000149107_5end | |||
|cluster_id=chr19:32313286..32313328,- | |||
|description=CAGE_peak_10_at_Sgms1_5end | |||
|id=chr19:32313286..32313328,- | |||
|ontology_enrichment_celltype=CL:0000050!2.77e-07!9;CL:0000553!4.00e-07!6;CL:0000556!4.00e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000050,2.94e-16,9;CL:0000553,4.68e-15,6;CL:0000556,4.68e-15,6;CL:0000049,5.43e-13,19;CL:0000839,8.13e-11,13;CL:0000763,1.59e-08,16;CL:0000988,2.48e-08,32;CL:0002032,2.48e-08,32;CL:0000037,2.48e-08,32;CL:0000837,2.48e-08,32;CL:0002027,2.90e-08,3;CL:0002006,2.90e-08,3;CL:0002024,2.90e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.58e-10,6;UBERON:0004457,1.58e-10,6;UBERON:0000042,1.58e-10,6;UBERON:0004854,1.58e-10,6;UBERON:0009034,1.58e-10,6;UBERON:0002095,1.58e-10,6;UBERON:0004782,1.58e-10,6;UBERON:0003281,1.58e-10,6;UBERON:0009664,1.58e-10,6;UBERON:0002296,1.58e-10,6;UBERON:0005602,1.58e-10,6;UBERON:0001179,1.58e-10,6;UBERON:0006293,1.58e-10,6;UBERON:0005172,3.28e-09,49;UBERON:0005173,3.28e-09,49;UBERON:0002417,3.28e-09,49;UBERON:0000916,3.28e-09,49;UBERON:0002107,3.46e-09,22;UBERON:0007499,3.46e-09,22;UBERON:0006925,3.46e-09,22;UBERON:0009497,3.46e-09,22;UBERON:0000015,3.46e-09,22;UBERON:0002423,3.46e-09,22;UBERON:0006235,3.46e-09,22;UBERON:0008835,3.46e-09,22;UBERON:0003894,3.46e-09,22;UBERON:0004161,3.46e-09,22;UBERON:0008836,3.46e-09,22;UBERON:0009854,1.06e-08,23;UBERON:0009856,1.06e-08,23;UBERON:0003887,1.70e-08,10;UBERON:0002365,7.61e-08,25;UBERON:0002330,7.61e-08,25;UBERON:0001474,1.53e-07,22;UBERON:0004765,1.53e-07,22;UBERON:0001434,1.53e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,7.08663435864391,12.5921138063066,6.78243655520211,7.95263714913285,7.63901373236454,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,1.90509202037889,1.23012957516914,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,10.5703041816374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,6.73238497482646,0.29688427812965,0,0,0.230615497256059,0,0,0,0,0.289198713839823,2.65383165584962,0.808834249737046,2.65009822152472,6.78825354389311,0,0,0,0,3.95389910869537,2.39961092397363,2.54140454146129,0,0,0,0,0,0,0,0,3.11017426525233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.571242563048644,0,0,0,0,0.0632365371242573,0,0,0,0,6.00642380577939,7.07612382407531,11.0182435068578,8.52012509831712,7.71766911207734,5.85639459097266,4.02774592431135,4.86405680325106,1.92192989231657,0,1.11642284300551,0,0,0,0.482443521363367,0.554259570499814,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0.164970122972535,0,0.728341908464944,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,6.83483523191411,0.412773735926445,3.70389054739423,10.360265135258,9.97867862363484,6.40578884978263,2.71965487990169,2.6590775941495,2.48759952847963,0,0,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.853668028770671,1.45864030240976,1.04806581313991,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.561849044819294,0.832326981263301,0.34461281373368,0.476293691283074,0.695305955669133,0.578727661391115,0.412085900803307,1.03039244094078,0.685738504770831,0.354951612318675,0.715308569841963,0.290692833264657,0.658765662907314,1.09998990259179,0,0.789209134313529,0.679020569229309,0,0.711810108745045,0.591026894253381,0.409231043169689,0.77468420592983,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0.927471342481686 | |||
|short_description=p10@Sgms1 | |||
}} |
Latest revision as of 15:05, 25 September 2015
Short description: | p10@Sgms1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Sgms1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000126332, ENSMUST00000149107_5end |
EntrezGene: | Sgms1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 2.94e-16 | 9 |
megakaryocyte progenitor cell | 4.68e-15 | 6 |
megakaryocyte | 4.68e-15 | 6 |
common myeloid progenitor | 5.43e-13 | 19 |
myeloid lineage restricted progenitor cell | 8.13e-11 | 13 |
myeloid cell | 1.59e-08 | 16 |
hematopoietic cell | 2.48e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.48e-08 | 32 |
hematopoietic stem cell | 2.48e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.48e-08 | 32 |
CD9-positive, CD41-positive megakaryocyte cell | 2.90e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.90e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.90e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.58e-10 | 6 |
cavity lining | 1.58e-10 | 6 |
serous membrane | 1.58e-10 | 6 |
gastrointestinal system mesentery | 1.58e-10 | 6 |
stomach region | 1.58e-10 | 6 |
mesentery | 1.58e-10 | 6 |
gastrointestinal system serosa | 1.58e-10 | 6 |
mesentery of stomach | 1.58e-10 | 6 |
gut mesentery | 1.58e-10 | 6 |
dorsal mesentery | 1.58e-10 | 6 |
dorsal mesogastrium | 1.58e-10 | 6 |
peritoneal cavity | 1.58e-10 | 6 |
spleen primordium | 1.58e-10 | 6 |
abdomen element | 3.28e-09 | 49 |
abdominal segment element | 3.28e-09 | 49 |
abdominal segment of trunk | 3.28e-09 | 49 |
abdomen | 3.28e-09 | 49 |
liver | 3.46e-09 | 22 |
epithelial sac | 3.46e-09 | 22 |
digestive gland | 3.46e-09 | 22 |
epithelium of foregut-midgut junction | 3.46e-09 | 22 |
anatomical boundary | 3.46e-09 | 22 |
hepatobiliary system | 3.46e-09 | 22 |
foregut-midgut junction | 3.46e-09 | 22 |
hepatic diverticulum | 3.46e-09 | 22 |
liver primordium | 3.46e-09 | 22 |
septum transversum | 3.46e-09 | 22 |
liver bud | 3.46e-09 | 22 |
digestive tract diverticulum | 1.06e-08 | 23 |
sac | 1.06e-08 | 23 |
intraembryonic coelom | 1.70e-08 | 10 |
exocrine gland | 7.61e-08 | 25 |
exocrine system | 7.61e-08 | 25 |
bone element | 1.53e-07 | 22 |
skeletal element | 1.53e-07 | 22 |
skeletal system | 1.53e-07 | 22 |