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FFCP PHASE1:Mm9::chr5:138070397..138070430,+: Difference between revisions

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{{FFCP|EntrezGene=231798,100316903|HGNC=|MCL_coexpression_id=316|UniProt=Q921G6,Q8C2M4|association_with_transcript=46bp_to_ENSMUST00000031734,NM_001168652,NM_146164,NR_033148,uc009ade.2,uc009adg.2_5end|description=CAGE_peak_1_at_Lrch4-sap25_5end,CAGE_peak_1_at_Lrch4_5end|id=chr5:138070397..138070430,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.01e-16!48;UBERON:0002390!1.29e-15!45;UBERON:0003061!1.29e-15!45;UBERON:0002204!1.02e-09!32;UBERON:0001474!1.02e-09!22;UBERON:0004765!1.02e-09!22;UBERON:0001434!1.02e-09!22;UBERON:0002371!6.65e-09!16;UBERON:0003081!7.33e-09!88;UBERON:0001004!1.33e-08!42;UBERON:0000065!2.94e-08!41;UBERON:0004177!4.78e-08!29;UBERON:0002405!7.00e-08!70;UBERON:0000926!4.24e-07!193;UBERON:0004120!4.24e-07!193;UBERON:0006603!4.24e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.01e-16,48;UBERON:0002405,2.01e-16,48;UBERON:0002390,1.29e-15,45;UBERON:0003061,1.29e-15,45;UBERON:0002204,1.02e-09,32;UBERON:0001474,1.02e-09,22;UBERON:0004765,1.02e-09,22;UBERON:0001434,1.02e-09,22;UBERON:0002371,6.65e-09,16;UBERON:0001004,1.33e-08,42;UBERON:0003081,1.89e-08,87;UBERON:0000065,2.94e-08,41;UBERON:0004177,4.78e-08,29;UBERON:0005057,4.78e-08,29;UBERON:0000926,3.09e-07,120;UBERON:0004120,3.09e-07,120;UBERON:0006603,3.09e-07,120;UBERON:0000077,9.02e-07,35|phase1_expression=15.534438169165,21.6364752736404,25.9349566452036,26.9193148063079,26.0465779572101,25.6855286025191,16.8201101228778,86.2543800589729,10.6999428835267,11.7032263160997,6.8487187290202,5.98291192465023,79.9507408778731,107.26483376811,23.3176833270964,30.5737653758637,20.2872944657163,70.0326007095288,64.8551270955144,50.9267582157636,32.911753288464,28.9929577506585,30.8215751183944,20.6390225403495,19.7291981717766,16.6527269593356,26.2764817657036,22.4090081993325,12.7315691035771,11.3413558391969,11.9734475753865,15.8757668364908,18.4519436275371,0,13.2871745085586,9.80784407615105,11.0251452381679,131.418932051389,100.010924099046,76.4344666201745,174.704751945211,152.319143145733,122.348608963851,8.81277725829041,8.71841608487825,10.4621648732158,44.5963066278382,14.3896603211095,12.7417985985994,17.3042610176112,24.4976237844384,23.0004102983955,55.7038252111685,58.7543335029189,44.3643814868052,30.0993540162058,35.5301465524058,24.2365883370398,6.67644320836673,4.23192783417626,12.0427966666174,13.2149367506962,25.789549087223,142.184155330461,138.441290759376,172.646667931902,64.7136238719754,54.9432176609823,8.8136170462206,6.75029691658453,5.25812403378455,13.4255962669788,12.3686382932904,6.98197555525238,10.7346927540425,10.1114066527102,9.91042928994498,10.214987046815,9.21639199537461,6.85808696197008,10.0636407962651,13.022834263919,12.0048689570594,10.1297269805702,11.3070703354839,12.374400589894,9.5389026135399,9.50637173709033,10.4502146799794,15.870027622425,22.0297011413275,11.185510400758,2.03991400112325,9.71465744948071,3.24888208723835,4.03224198387602,15.1679973742292,11.930122580464,6.49465011507172,10.9535268098205,27.1827800168993,28.2318250311499,25.4805239706646,49.7746692207332,24.4634876342672,15.7083116594561,16.1767822404731,16.3282947998256,60.8504026570854,16.7739617143252,10.7560902595004,7.30717147949139,8.30215790121811,7.68685466818375,13.8754674420132,13.1949920896159,21.5059621928905,13.5923395504717,47.7689698052932,16.3384518446883,25.1759331044849,25.6983884161668,22.3670113461747,13.1751358655196,11.1006754611131,14.0501380364725,36.3039827252938,19.7967901227825,26.9388881394897,8.23848516726525,8.23501085073528,7.28795242254614,11.298580812498,10.2286182932132,8.93488591606108,11.1946471516753,14.7667077582959,21.5224059155461,28.8103944614389,25.4634645622634,11.4505989807179,7.58676944630461,8.10279584124071,11.7549757911858,17.2132342852859,14.2206229516183,16.585205247072,25.6116337031625,9.48499168904506,12.6701073712439,8.79755620819744,11.1789823538063,11.6779844674751,14.2783388274088,11.7295817752528,10.1507476077432,23.87524836865,27.2788781541598,36.3729279226359,8.28503090142008,11.2572508790926,9.54328925743379,13.0209604571866,13.3799677588235,10.181629450567,11.8592311822708,11.267482858784,11.4430035519826,12.8356682932515,15.2675741593559,16.7001747664463,16.0819986167866,14.7098577245004,18.6546922076917,17.0334858336943,9.15851050175631,24.4509899408011,12.4291766331866,9.38468302355029,8.36052018697579,10.8248667510558,12.7060620512706,11.5636582799333,12.7451169495415,22.302865892592,11.5289268306808,18.5988054512199,24.4716460610616,22.4208700186988,19.7740269903929,21.18152888772,25.490082976559,11.9490777600441,13.2528274627285,12.3978509240388,11.8117770150282,14.3524840504043,19.0068071902763,26.053453295194,23.6176236767363,19.7818397080132,19.6201490635663,7.41131567717872,12.8470731401392,11.7935397067922,12.367416181167,15.8230894683032,15.1941610644023,11.2035374783825,17.8371605219503,18.6455510791291,13.453509246216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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=231798,100316903
|HGNC=
|MCL_coexpression_id=316
|TSSclassifier=NA
|UniProt=Q921G6,Q8C2M4
|association_with_transcript=46bp_to_ENSMUST00000031734,NM_001168652,NM_146164,NR_033148,uc009ade.2,uc009adg.2_5end
|cluster_id=chr5:138070397..138070430,+
|description=CAGE_peak_1_at_Lrch4-sap25_5end,CAGE_peak_1_at_Lrch4_5end
|id=chr5:138070397..138070430,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.01e-16,48;UBERON:0002405,2.01e-16,48;UBERON:0002390,1.29e-15,45;UBERON:0003061,1.29e-15,45;UBERON:0002204,1.02e-09,32;UBERON:0001474,1.02e-09,22;UBERON:0004765,1.02e-09,22;UBERON:0001434,1.02e-09,22;UBERON:0002371,6.65e-09,16;UBERON:0001004,1.33e-08,42;UBERON:0003081,1.89e-08,87;UBERON:0000065,2.94e-08,41;UBERON:0004177,4.78e-08,29;UBERON:0005057,4.78e-08,29;UBERON:0000926,3.09e-07,120;UBERON:0004120,3.09e-07,120;UBERON:0006603,3.09e-07,120;UBERON:0000077,9.02e-07,35
|phase1_expression=15.534438169165,21.6364752736404,25.9349566452036,26.9193148063079,26.0465779572101,25.6855286025191,16.8201101228778,86.2543800589729,10.6999428835267,11.7032263160997,6.8487187290202,5.98291192465023,79.9507408778731,107.26483376811,23.3176833270964,30.5737653758637,20.2872944657163,70.0326007095288,64.8551270955144,50.9267582157636,32.911753288464,28.9929577506585,30.8215751183944,20.6390225403495,19.7291981717766,16.6527269593356,26.2764817657036,22.4090081993325,12.7315691035771,11.3413558391969,11.9734475753865,15.8757668364908,18.4519436275371,0,13.2871745085586,9.80784407615105,11.0251452381679,131.418932051389,100.010924099046,76.4344666201745,174.704751945211,152.319143145733,122.348608963851,8.81277725829041,8.71841608487825,10.4621648732158,44.5963066278382,14.3896603211095,12.7417985985994,17.3042610176112,24.4976237844384,23.0004102983955,55.7038252111685,58.7543335029189,44.3643814868052,30.0993540162058,35.5301465524058,24.2365883370398,6.67644320836673,4.23192783417626,12.0427966666174,13.2149367506962,25.789549087223,142.184155330461,138.441290759376,172.646667931902,64.7136238719754,54.9432176609823,8.8136170462206,6.75029691658453,5.25812403378455,13.4255962669788,12.3686382932904,6.98197555525238,10.7346927540425,10.1114066527102,9.91042928994498,10.214987046815,9.21639199537461,6.85808696197008,10.0636407962651,13.022834263919,12.0048689570594,10.1297269805702,11.3070703354839,12.374400589894,9.5389026135399,9.50637173709033,10.4502146799794,15.870027622425,22.0297011413275,11.185510400758,2.03991400112325,9.71465744948071,3.24888208723835,4.03224198387602,15.1679973742292,11.930122580464,6.49465011507172,10.9535268098205,27.1827800168993,28.2318250311499,25.4805239706646,49.7746692207332,24.4634876342672,15.7083116594561,16.1767822404731,16.3282947998256,60.8504026570854,16.7739617143252,10.7560902595004,7.30717147949139,8.30215790121811,7.68685466818375,13.8754674420132,13.1949920896159,21.5059621928905,13.5923395504717,47.7689698052932,16.3384518446883,25.1759331044849,25.6983884161668,22.3670113461747,13.1751358655196,11.1006754611131,14.0501380364725,36.3039827252938,19.7967901227825,26.9388881394897,8.23848516726525,8.23501085073528,7.28795242254614,11.298580812498,10.2286182932132,8.93488591606108,11.1946471516753,14.7667077582959,21.5224059155461,28.8103944614389,25.4634645622634,11.4505989807179,7.58676944630461,8.10279584124071,11.7549757911858,17.2132342852859,14.2206229516183,16.585205247072,25.6116337031625,9.48499168904506,12.6701073712439,8.79755620819744,11.1789823538063,11.6779844674751,14.2783388274088,11.7295817752528,10.1507476077432,23.87524836865,27.2788781541598,36.3729279226359,8.28503090142008,11.2572508790926,9.54328925743379,13.0209604571866,13.3799677588235,10.181629450567,11.8592311822708,11.267482858784,11.4430035519826,12.8356682932515,15.2675741593559,16.7001747664463,16.0819986167866,14.7098577245004,18.6546922076917,17.0334858336943,9.15851050175631,24.4509899408011,12.4291766331866,9.38468302355029,8.36052018697579,10.8248667510558,12.7060620512706,11.5636582799333,12.7451169495415,22.302865892592,11.5289268306808,18.5988054512199,24.4716460610616,22.4208700186988,19.7740269903929,21.18152888772,25.490082976559,11.9490777600441,13.2528274627285,12.3978509240388,11.8117770150282,14.3524840504043,19.0068071902763,26.053453295194,23.6176236767363,19.7818397080132,19.6201490635663,7.41131567717872,12.8470731401392,11.7935397067922,12.367416181167,15.8230894683032,15.1941610644023,11.2035374783825,17.8371605219503,18.6455510791291,13.453509246216,15.814502718009,13.3970741160661,12.793544597697,10.3557339958316,8.25228102200796,7.23665282045051,34.3640933709885,7.95863929436036,9.4519686336375,13.0703716046895,18.5405296147917,27.8060387353414,26.6608877792335,41.5634669937112,26.6403393539463,29.8977331025846,37.7907801718244,39.8187854759243,36.9545861193017,44.5519100431056,93.4905960423488,119.659250440116,15.7364567366092,19.3155722413313,7.38532713943843,10.1974167335217,5.40985319743029,16.915552122693,11.042787679569,13.6653560503823,14.4333676480975,16.2498782607735,15.3731085116852,12.7384438854975,16.1924280669958,11.3979784585412,10.6727700045561,13.4954952897159,16.1811697137426,12.4645922567079,12.7051828295789,23.4257574621,22.5666735177937,8.98288353773431,10.5813244937663,10.3732793865744,18.0134154657271,12.2974059177571,16.7978390559344,22.1755574981278,15.329387270543,21.4904995396355,31.6255825724996,13.4076206222643,19.0646179222121,8.8229936075342,16.2991941566271,15.4322665222746,13.3005175231705,16.4099312193905,14.3157647923845,22.8348711835949,11.4989136951218,9.95610733059955,16.7601582521771,19.7863503529776,12.1098320021929,14.0529115082603,13.3697025283513,11.4898629821543,21.8610627472388,9.82754100655701,39.8129152258997,21.4642342681751,22.4085378117351,25.2413732386286,29.6626474154625,33.1728351149458,29.5762468189308,31.0692224158521,32.3387938702352,13.3653886522116,10.2809197913869,13.6224042974989,11.8805874903981,12.9634743528971,11.7915784422936,15.3745354878696,21.2419381214113,16.7523802869779,26.5710695248175,29.8242870281724,55.2419079910507,11.6622905914303,10.4238848987971,12.444876054019,11.2369046425626,10.1373675294467,11.0315804327009,11.9788034056434,15.5191829750052,18.8435614244285,36.291780788491,44.241556887945,17.8398189455344,23.5208091907454,28.8424227010705,40.9971133078532,43.7098980518783,59.0159657143047,54.497435527419,52.0986881732442,57.6885526378349,67.2510654862726,64.0298276460173,66.289958890187,72.4636793525728,13.3770926332975,4.88369097422942,5.74168682300644,4.19711540910196,22.4099929077341,18.9559300205694,19.4140721723301,10.9327873330324,19.5613120573792,5.0827665835536,4.14292712856459,5.15605962095457,7.90524638780963,8.22099023724771,7.55393897389701,4.72515750162264,5.40385443869065,6.79713613476307,5.69536342927002,7.68026372122907,19.5522187966505,12.2928196142977,14.1001895899611,9.4325923182592,11.5821410323509,13.5570503958985,9.47761263298913,10.9112531261217,10.6132828940795,9.37873409593887,12.6379648728671,17.2300373744584,17.0306905396952,16.5414150592166,13.3362233559261,17.2667645657835,15.046919196169,16.071350131329,10.4511233295422,11.6575545811041,13.3106854619503,10.4911923576821,9.88355633099834,10.540250606517,10.4075967706762,12.073246209603,11.5750673032651,14.9384525230448,10.661703161497,10.4398815949273,15.563708215339,14.3230865109391,17.0430525304563,14.8538090455479,12.9901500527732,12.3983752476066,16.7599422157673,15.3030665655075,13.67666798541,16.6944841646703
|short_description=p1@Lrch4-sap25,p1@Lrch4
}}

Latest revision as of 14:54, 25 September 2015

Short description:p1@Lrch4-sap25, p1@Lrch4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrch4-sap25_5end, CAGE_peak_1_at_Lrch4_5end
Coexpression cluster:MCL_coexpression_mm9:316
Association with transcript: 46bp_to_ENSMUST00000031734, NM_001168652, NM_146164, NR_033148, uc009ade.2, uc009adg.2_5end
EntrezGene:231798,100316903
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrch4-sap25p1@Lrch4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I625.93
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.92
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.82
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E986.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.98
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E479.95
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8107.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A123.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.57
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A270.03
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A464.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A650.93
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A332.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H228.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I930.82
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.73
GP2+ M cell, pool1.CNhs13228.11845-124H916.65
GP2+ M cell, pool2.CNhs13231.11846-124I126.28
GP2+ M cell, pool3.CNhs13240.11847-124I222.41
Ileum epithelium, pool1.CNhs13199.10252-104B912.73
Ileum epithelium, pool2.CNhs13232.10253-104C111.34
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G618.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8131.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1100.01
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H376.43
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9174.70
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2152.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4122.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.46
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B744.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.74
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C423.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A255.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I958.75
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A144.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C130.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E135.53
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C524.24
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D125.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7142.18
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7138.44
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2172.65
Mouse Microglia, donor1.CNhs12629.11718-123C864.71
Mouse Microglia, donor2.CNhs12634.11736-123E854.94
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.51
Mouse Schwann, donor1.CNhs12507.11728-123D910.45
Mouse Schwann, donor2.CNhs12573.11746-123F915.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H128.23
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.18
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.33
accessory axillary lymph node, adult.CNhs10475.1063-29H960.85
adrenal gland, adult.CNhs10508.49-24D716.77
adrenal gland, embryo E14.CNhs11038.406-44C510.76
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I18.30
adrenal gland, embryo E18.CNhs11026.1262-18F57.69
adrenal gland, neonate N00.CNhs11191.1311-23C113.88
adrenal gland, neonate N25.CNhs11223.1377-27I313.19
amnion, adult pregnant day17.5.CNhs10488.583-22A821.51
aorta, adult.CNhs10498.46-23H113.59
bone (os femoris), adult.CNhs10483.56-12G247.77
bone (os femoris), neonate N02.CNhs11227.1985-43F516.34
bone (os femoris), neonate N16.CNhs11225.1525-43A625.18
bone (os femoris), neonate N20.CNhs11195.1350-25C325.70
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I211.10
colon, adult.CNhs10468.36-18H714.05
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C736.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D426.94
corpora quadrigemina, adult.CNhs10501.16-22A48.24
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F17.29
cortex, adult.CNhs10473.12-14D511.30
cortex, neonate N30.CNhs11107.1392-42F210.23
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B211.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A221.52
epididymis, adult.CNhs10490.58-23B228.81
eyeball, adult.CNhs10484.31-12G425.46
eyeball, embryo E12.CNhs11016.345-16C611.45
eyeball, embryo E14.CNhs10521.399-16E27.59
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D411.75
eyeball, neonate N00.CNhs11207.633-15C617.21
eyeball, neonate N01.CNhs11140.1532-43E714.22
eyeball, neonate N02.CNhs11205.1551-44G816.59
eyeball, neonate N16.CNhs11188.777-19A225.61
forelimb, embryo E11.CNhs10596.335-25E29.48
forelimb, embryo E12.CNhs10600.359-14H212.67
forelimb, embryo E13.CNhs10589.384-1E28.80
forelimb, embryo E14.CNhs10577.413-26A811.18
forelimb, embryo E15.CNhs11007.437-20E711.68
forelimb, embryo E17.CNhs10598.1517-43C414.28
forelimb, embryo E18.CNhs11008.1520-43B511.73
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C823.88
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.28
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D536.37
heart, embryo E11.CNhs10586.331-24E98.29
heart, embryo E12.CNhs11015.353-12F511.26
heart, embryo E13.CNhs11013.376-3I99.54
heart, embryo E14.CNhs10597.403-26D413.02
heart, embryo E15.CNhs11017.431-16C813.38
heart, embryo E16.CNhs11021.457-17C610.18
heart, embryo E17.CNhs11025.479-18E511.86
heart, embryo E18.CNhs11030.1283-20G311.27
heart, neonate N00.CNhs11213.639-21E311.44
heart, neonate N03.CNhs11221.1349-25I212.84
heart, neonate N10.CNhs11118.749-24G115.27
heart, neonate N16.CNhs11209.782-15G116.70
heart, neonate N20.CNhs11127.821-26I616.08
heart, neonate N25.CNhs11196.1351-25D314.71
heart, neonate N30.CNhs11202.1390-42D218.65
hippocampus, adult.CNhs10478.13-16E817.03
hippocampus, neonate N00.CNhs11228.627-43G19.16
intestinal mucosa, adult.CNhs10506.860-29I324.45
intestine, adult.CNhs10496.178-9A312.43
intestine, embryo E12.CNhs11019.1251-16I59.38
intestine, embryo E13.CNhs11010.381-16D58.36
intestine, embryo E15.CNhs10602.976-16D810.82
intestine, embryo E16.CNhs10585.463-22H412.71
intestine, embryo E17.CNhs10582.482-18D311.56
intestine, embryo E18.CNhs10526.1289-20F712.75
intestine, neonate N00.CNhs11126.644-26D122.30
intestine, neonate N01.CNhs11192.1322-23E911.53
intestine, neonate N06.CNhs11102.688-20B818.60
intestine, neonate N07.CNhs11095.720-20F224.47
intestine, neonate N10.CNhs11098.755-23A522.42
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E321.18
intestine, neonate N30.CNhs11131.1384-42G125.49
kidney, embryo E14.CNhs10606.411-4I911.95
kidney, embryo E15.CNhs10997.434-16F813.25
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I211.81
kidney, embryo E18.CNhs11001.1288-20C714.35
kidney, neonate N00.CNhs11214.646-21G719.01
kidney, neonate N10.CNhs11206.758-6D526.05
kidney, neonate N20.CNhs11113.832-19I123.62
kidney, neonate N25.CNhs11122.1353-25F319.78
kidney, neonate N30.CNhs11203.1385-42H119.62
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F812.85
liver, embryo E13.CNhs10524.378-3H611.79
liver, embryo E14.CNhs10594.409-16E112.37
liver, embryo E15.CNhs10520.433-16D715.82
liver, embryo E16.CNhs10523.462-17F515.19
liver, embryo E17.CNhs10510.481-18A311.20
liver, embryo E18.CNhs10579.499-43G417.84
liver, neonate N00.CNhs11117.641-24F418.65
liver, neonate N03.CNhs11123.1345-25G213.45
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H213.40
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A310.36
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B134.36
lung, embryo E12.CNhs10522.354-16G27.96
lung, embryo E14.CNhs10604.404-26F89.45
lung, embryo E15.CNhs11020.432-17C513.07
lung, embryo E16.CNhs10998.458-17B618.54
lung, embryo E17.CNhs10605.480-44A627.81
lung, embryo E18.CNhs10583.1287-20I626.66
lung, neonate N00.CNhs11224.640-42C641.56
lung, neonate N06.CNhs11212.683-20E526.64
lung, neonate N07.CNhs11111.715-19A329.90
lung, neonate N10.CNhs11219.750-23E637.79
lung, neonate N20.CNhs11109.822-18A439.82
lung, neonate N25.CNhs11119.1359-25C736.95
lung, neonate N30.CNhs11133.1394-42H244.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A193.49
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1119.66
mammary gland, adult lactating day02.CNhs10480.595-22B615.74
mammary gland, adult pregnant day19.CNhs10476.588-5H219.32
medulla oblongata, adult.CNhs10477.17-12C27.39
medulla oblongata, neonate N30.CNhs11200.1396-42A310.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.92
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.25
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.19
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I716.18
ovary, embryo E18.CNhs11040.505-44H712.46
ovary, neonate N00.CNhs11217.1299-22I412.71
oviduct, adult pregnant day01.CNhs10500.988-6G623.43
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F210.58
pancreas, embryo E16.CNhs11003.460-26E510.37
pancreas, embryo E17.CNhs10599.1558-45G318.01
pancreas, embryo E18.CNhs10580.1535-43I712.30
pancreas, neonate N00.CNhs11105.645-26G916.80
pancreas, neonate N01.CNhs11138.1531-43D722.18
pancreas, neonate N02.CNhs11139.1539-43D815.33
pancreas, neonate N16.CNhs11136.787-43B621.49
pancreas, neonate N25.CNhs11094.1555-45E231.63
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G819.06
pituitary gland, embryo E12.CNhs11018.346-16E68.82
pituitary gland, embryo E13.CNhs11009.370-44C716.30
pituitary gland, embryo E14.CNhs11037.398-44A515.43
pituitary gland, embryo E15.CNhs10592.427-16B913.30
pituitary gland, embryo E16.CNhs11036.449-43F616.41
pituitary gland, embryo E17.CNhs11039.1265-44F514.32
pituitary gland, neonate N00.CNhs11190.1308-22E922.83
placenta, adult pregnant day10.CNhs10472.539-13I711.50
placenta, adult pregnant day17.CNhs10464.577-18G39.96
prostate, adult.CNhs10470.859-1F816.76
skin, adult.CNhs10492.30-1C319.79
skin, neonate N00.CNhs11124.650-25G412.11
skin, neonate N03.CNhs11215.662-22H314.05
skin, neonate N06.CNhs11097.693-20I513.37
skin, neonate N10.CNhs11108.762-6C411.49
small intestine, neonate N16.CNhs11114.790-21I121.86
spinal cord, adult.CNhs10505.24-13C99.83
spleen, adult.CNhs10465.25-2G239.81
spleen, embryo E16.CNhs11035.461-43C121.46
spleen, embryo E18.CNhs11011.1271-21F222.41
spleen, neonate N10.CNhs11116.752-24D125.24
spleen, neonate N20.CNhs11112.824-19H129.66
spleen, neonate N25.CNhs11099.1354-25G333.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C629.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C931.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D332.34
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E310.28
stomach, embryo E15.CNhs10603.1252-16G813.62
stomach, embryo E16.CNhs11022.459-17D411.88
stomach, embryo E17.CNhs11006.1035-18D512.96
stomach, embryo E18.CNhs10999.1286-20C611.79
stomach, neonate N03.CNhs11193.1340-24B815.37
stomach, neonate N07.CNhs11210.718-18A921.24
stomach, neonate N25.CNhs11104.1355-25E416.75
stomach, neonate N30.CNhs11134.1386-42I126.57
submandibular gland, adult.CNhs10469.59-29C129.82
testis, adult.CNhs10504.57-7G555.24
testis, embryo E13.CNhs11031.389-23F511.66
testis, embryo E15.CNhs11034.443-27C510.42
testis, embryo E16.CNhs11033.470-26G512.44
testis, embryo E17.CNhs11029.486-18I511.24
testis, embryo E18.CNhs11027.503-18G510.14
testis, neonate N00.CNhs11189.1300-22B711.03
testis, neonate N07.CNhs11222.726-26I411.98
testis, neonate N10.CNhs11204.763-44D915.52
testis, neonate N20.CNhs11110.839-18H318.84
testis, neonate N30.CNhs11130.1391-42E236.29
thymus, adult.CNhs10471.38-12B544.24
thymus, embryo E14.CNhs11041.402-44I417.84
thymus, embryo E15.CNhs11005.430-45I223.52
thymus, embryo E16.CNhs11002.456-26C528.84
thymus, embryo E17.CNhs10581.478-18C141.00
thymus, embryo E18.CNhs10595.1273-19G443.71
thymus, neonate N02.CNhs11181.1541-43F859.02
thymus, neonate N03.CNhs11137.2104-43C754.50
thymus, neonate N06.CNhs11197.681-26C452.10
thymus, neonate N07.CNhs11211.713-19D357.69
thymus, neonate N10.CNhs11194.748-24E467.25
thymus, neonate N20.CNhs11186.820-7A264.03
thymus, neonate N25.CNhs11125.1362-25G766.29
thymus, neonate N30.CNhs11132.1393-42G272.46
tongue, adult.CNhs10499.32-1B413.38
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.74
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E422.41
uterus, adult pregnant day19.CNhs10497.590-15F518.96
uterus, adult.CNhs10509.92-27E519.41
vagina, adult.CNhs10502.89-27D510.93
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I87.68
whole body, embryo E12.CNhs10587.857-27C919.55
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D214.10
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F211.58
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.23
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.41
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.04
whole body, embryo E17.5.CNhs10513.490-9F914.85
whole body, embryo E17.CNhs10517.475-3I512.99
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C216.76
whole body, neonate N01.CNhs10576.659-23C615.30
whole body, neonate N06.CNhs10515.692-21D113.68
whole body, neonate N10.CNhs10518.761-6B416.69





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system2.01e-1648
immune system2.01e-1648
hematopoietic system1.29e-1545
blood island1.29e-1545
musculoskeletal system1.02e-0932
bone element1.02e-0922
skeletal element1.02e-0922
skeletal system1.02e-0922
bone marrow6.65e-0916
respiratory system1.33e-0842
lateral plate mesoderm1.89e-0887
respiratory tract2.94e-0841
hemopoietic organ4.78e-0829
immune organ4.78e-0829
mesoderm3.09e-07120
mesoderm-derived structure3.09e-07120
presumptive mesoderm3.09e-07120
mixed endoderm/mesoderm-derived structure9.02e-0735
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