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FFCP PHASE1:Mm9::chr5:138011084..138011107,+: Difference between revisions

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{{FFCP|EntrezGene=50765|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=0bp_to_uc009acx.1_5end|description=CAGE_peak_1_at_Trfr2_5end|id=chr5:138011084..138011107,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.47e-16!22;UBERON:0007499!1.47e-16!22;UBERON:0006925!1.47e-16!22;UBERON:0009497!1.47e-16!22;UBERON:0000015!1.47e-16!22;UBERON:0002423!1.47e-16!22;UBERON:0006235!1.47e-16!22;UBERON:0008835!1.47e-16!22;UBERON:0003894!1.47e-16!22;UBERON:0004161!1.47e-16!22;UBERON:0008836!1.47e-16!22;UBERON:0009854!2.96e-15!23;UBERON:0009856!2.96e-15!23;UBERON:0002365!4.66e-15!25;UBERON:0002330!4.66e-15!25;UBERON:0005172!2.24e-13!49;UBERON:0005173!2.24e-13!49;UBERON:0002417!2.24e-13!49;UBERON:0000916!2.24e-13!49;UBERON:0005256!1.12e-08!47;UBERON:0002405!1.60e-08!70;UBERON:0005057!2.45e-08!51|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.10e-22,22;UBERON:0007499,5.10e-22,22;UBERON:0006925,5.10e-22,22;UBERON:0009497,5.10e-22,22;UBERON:0000015,5.10e-22,22;UBERON:0002423,5.10e-22,22;UBERON:0006235,5.10e-22,22;UBERON:0008835,5.10e-22,22;UBERON:0003894,5.10e-22,22;UBERON:0004161,5.10e-22,22;UBERON:0008836,5.10e-22,22;UBERON:0009854,1.20e-20,23;UBERON:0009856,1.20e-20,23;UBERON:0002365,1.57e-19,25;UBERON:0002330,1.57e-19,25;UBERON:0005172,7.56e-16,49;UBERON:0005173,7.56e-16,49;UBERON:0002417,7.56e-16,49;UBERON:0000916,7.56e-16,49;UBERON:0005256,3.30e-13,45;UBERON:0003104,2.36e-09,61;UBERON:0009142,2.36e-09,61;UBERON:0002368,8.61e-09,60;UBERON:0009569,1.00e-08,66;UBERON:0002530,7.54e-08,65;UBERON:0003914,5.49e-07,47|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,4.33042690360362,6.2767332890846,8.39474253753776,0.157731082679119,0.274228867211478,0.84877930359606,0.595303031057488,0,0,0,0,0,0.430761996159075,0,0,0,0,6.98533740805594,5.53558308826113,0,1.1554064790051,0.166234645358492,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0,0,0,7.0299578475031,8.94377535741704,0,0,0.503347818173209,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0.899899717281399,0,0,4.79360176829448,15.3687322128622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,265.870977987248,299.18738683141,484.113762899122,500.977617852153,438.170295581194,89.8844288843212,2.04516387093669,2.07828803682295,0.70667914902068,0,14.115912515575,22.9324715735981,7.11066703153331,0,0,0,133.138403752424,0.517875767294343,2.07818994690755,1.21439728736295,1.82679286987285,5.76538743140146,2.86373017049983,3.99801604261396,2.01066546127481,0,1.73519228303894,1.76922110389975,1.29413479957927,1.32504911076236,1.45462575940567,0,0,0,0,1.7972268675888,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0.305518091550949,1.36847667671102,0,1.47309299120532,0,0,0,1.65775299619287,0,0,0,0.517406741478031,0.431135985865684,0,0,0,0,0.696504333044333,2.46938563689532,0.199034266818493,0.702213187313235,0.772043721344145,0.852490498186778,0.207125772535502,0.469052119962192,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0.536825675041487,0,0.205809224758569,0,0,0,0,0.257734922644187,0,0.22237804384487,0.760902504450237,0,0,1.75934646160189,1.39269530428806,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0.123397163921801,394.281994025908,13.3476084572875,11.4004217165658,20.6873143394065,30.0232979654984,39.7942313591488,58.5639459097266,92.3504601217102,153.542059755959,255.067552851728,276.034956532521,332.694007215642,264.607946801147,270.25939940341,244.698072043888,446.742700782478,0,0,0,0,0,0,0.952174563544055,0,0,0,0,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0,0,0.757412781613119,0.94652465824877,0,0,0,0,0,0,0,0,0,0.283880170416537,4.45164009168138,0,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0.922305443831782,1.03371317267288,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.241251699712623,0.358117032009409,0.164140899745061,0,0,5.46786818553129,0.82554747185289,3.88908507476395,9.04168593622517,6.56132293060921,5.71945433016307,3.39956859987711,3.07893195112048,3.17859939750175,0.954670618015114,0.474503990371703,0.406638934253697,0.432021363287205,0.209088296014469,1.09181281873089,6.87808166562586,28.3501353137902,0.26175594198403,0.129614973291793,1.24267862617385,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,6.11960608766566,1.57289016638566,0.724752362478018,0,0,0.405450430580328,0.821687657318618,0.25984164595559,0.537080087002444,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,1.15913756419314,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,3.07320490357441,5.83456120963906,4.19226325255965,2.75765262675021,8.22312892865976,7.41726206060019,7.38114182061175,5.55933865880354,7.09742039692671,6.22466926574051,6.18033949301224,5.57018825922363,5.22662767496081,6.19181798667996,6.14186927507734,5.98018583437486,5.35711671044299,6.47675248591348,5.48590803816665,5.50174999093946,4.5302876089991,5.81385666529314,5.27012530325851,5.49994951295897,4.57319932181931,5.5244639401947,4.75314398460516,6.17256498823512,5.57584585183618,4.72821515402705,5.72923460437565,5.26785260032284,6.94463799532109,0.499621155875892,11.2287172053796,18.693781702202,0.382576664137687,3.75005412503176,1.15933917810211|short_description=p1@Trfr2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=50765
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_uc009acx.1_5end
|cluster_id=chr5:138011084..138011107,+
|description=CAGE_peak_1_at_Trfr2_5end
|id=chr5:138011084..138011107,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!1.47e-16!22;UBERON:0007499!1.47e-16!22;UBERON:0006925!1.47e-16!22;UBERON:0009497!1.47e-16!22;UBERON:0000015!1.47e-16!22;UBERON:0002423!1.47e-16!22;UBERON:0006235!1.47e-16!22;UBERON:0008835!1.47e-16!22;UBERON:0003894!1.47e-16!22;UBERON:0004161!1.47e-16!22;UBERON:0008836!1.47e-16!22;UBERON:0009854!2.96e-15!23;UBERON:0009856!2.96e-15!23;UBERON:0002365!4.66e-15!25;UBERON:0002330!4.66e-15!25;UBERON:0005172!2.24e-13!49;UBERON:0005173!2.24e-13!49;UBERON:0002417!2.24e-13!49;UBERON:0000916!2.24e-13!49;UBERON:0005256!1.12e-08!47;UBERON:0002405!1.60e-08!70;UBERON:0005057!2.45e-08!51
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.10e-22,22;UBERON:0007499,5.10e-22,22;UBERON:0006925,5.10e-22,22;UBERON:0009497,5.10e-22,22;UBERON:0000015,5.10e-22,22;UBERON:0002423,5.10e-22,22;UBERON:0006235,5.10e-22,22;UBERON:0008835,5.10e-22,22;UBERON:0003894,5.10e-22,22;UBERON:0004161,5.10e-22,22;UBERON:0008836,5.10e-22,22;UBERON:0009854,1.20e-20,23;UBERON:0009856,1.20e-20,23;UBERON:0002365,1.57e-19,25;UBERON:0002330,1.57e-19,25;UBERON:0005172,7.56e-16,49;UBERON:0005173,7.56e-16,49;UBERON:0002417,7.56e-16,49;UBERON:0000916,7.56e-16,49;UBERON:0005256,3.30e-13,45;UBERON:0003104,2.36e-09,61;UBERON:0009142,2.36e-09,61;UBERON:0002368,8.61e-09,60;UBERON:0009569,1.00e-08,66;UBERON:0002530,7.54e-08,65;UBERON:0003914,5.49e-07,47
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,4.33042690360362,6.2767332890846,8.39474253753776,0.157731082679119,0.274228867211478,0.84877930359606,0.595303031057488,0,0,0,0,0,0.430761996159075,0,0,0,0,6.98533740805594,5.53558308826113,0,1.1554064790051,0.166234645358492,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0,0,0,7.0299578475031,8.94377535741704,0,0,0.503347818173209,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0.899899717281399,0,0,4.79360176829448,15.3687322128622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,265.870977987248,299.18738683141,484.113762899122,500.977617852153,438.170295581194,89.8844288843212,2.04516387093669,2.07828803682295,0.70667914902068,0,14.115912515575,22.9324715735981,7.11066703153331,0,0,0,133.138403752424,0.517875767294343,2.07818994690755,1.21439728736295,1.82679286987285,5.76538743140146,2.86373017049983,3.99801604261396,2.01066546127481,0,1.73519228303894,1.76922110389975,1.29413479957927,1.32504911076236,1.45462575940567,0,0,0,0,1.7972268675888,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0.305518091550949,1.36847667671102,0,1.47309299120532,0,0,0,1.65775299619287,0,0,0,0.517406741478031,0.431135985865684,0,0,0,0,0.696504333044333,2.46938563689532,0.199034266818493,0.702213187313235,0.772043721344145,0.852490498186778,0.207125772535502,0.469052119962192,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0.536825675041487,0,0.205809224758569,0,0,0,0,0.257734922644187,0,0.22237804384487,0.760902504450237,0,0,1.75934646160189,1.39269530428806,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0.123397163921801,394.281994025908,13.3476084572875,11.4004217165658,20.6873143394065,30.0232979654984,39.7942313591488,58.5639459097266,92.3504601217102,153.542059755959,255.067552851728,276.034956532521,332.694007215642,264.607946801147,270.25939940341,244.698072043888,446.742700782478,0,0,0,0,0,0,0.952174563544055,0,0,0,0,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0,0,0.757412781613119,0.94652465824877,0,0,0,0,0,0,0,0,0,0.283880170416537,4.45164009168138,0,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0.922305443831782,1.03371317267288,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.241251699712623,0.358117032009409,0.164140899745061,0,0,5.46786818553129,0.82554747185289,3.88908507476395,9.04168593622517,6.56132293060921,5.71945433016307,3.39956859987711,3.07893195112048,3.17859939750175,0.954670618015114,0.474503990371703,0.406638934253697,0.432021363287205,0.209088296014469,1.09181281873089,6.87808166562586,28.3501353137902,0.26175594198403,0.129614973291793,1.24267862617385,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,6.11960608766566,1.57289016638566,0.724752362478018,0,0,0.405450430580328,0.821687657318618,0.25984164595559,0.537080087002444,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,1.15913756419314,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,3.07320490357441,5.83456120963906,4.19226325255965,2.75765262675021,8.22312892865976,7.41726206060019,7.38114182061175,5.55933865880354,7.09742039692671,6.22466926574051,6.18033949301224,5.57018825922363,5.22662767496081,6.19181798667996,6.14186927507734,5.98018583437486,5.35711671044299,6.47675248591348,5.48590803816665,5.50174999093946,4.5302876089991,5.81385666529314,5.27012530325851,5.49994951295897,4.57319932181931,5.5244639401947,4.75314398460516,6.17256498823512,5.57584585183618,4.72821515402705,5.72923460437565,5.26785260032284,6.94463799532109,0.499621155875892,11.2287172053796,18.693781702202,0.382576664137687,3.75005412503176,1.15933917810211
|short_description=p1@Trfr2
}}

Latest revision as of 14:49, 25 September 2015

Short description:p1@Trfr2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trfr2_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_uc009acx.1_5end
EntrezGene:Trfr2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trfr2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E815.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7265.87
Mouse hepatocyte, donor1.CNhs13078.11714-123C4299.19
Mouse hepatocyte, donor3.CNhs12615.11637-122C8484.11
Mouse hepatocyte, donor6.CNhs13090.11822-124F4500.98
Mouse hepatocyte, donor8.CNhs13091.11824-124F6438.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A789.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6133.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B2394.28
liver, embryo E12.CNhs10601.355-15F813.35
liver, embryo E13.CNhs10524.378-3H611.40
liver, embryo E14.CNhs10594.409-16E120.69
liver, embryo E15.CNhs10520.433-16D730.02
liver, embryo E16.CNhs10523.462-17F539.79
liver, embryo E17.CNhs10510.481-18A358.56
liver, embryo E18.CNhs10579.499-43G492.35
liver, neonate N00.CNhs11117.641-24F4153.54
liver, neonate N03.CNhs11123.1345-25G2255.07
liver, neonate N06.CNhs11101.684-20A8276.03
liver, neonate N07.CNhs11103.716-20H2332.69
liver, neonate N10.CNhs11115.751-24B9264.61
liver, neonate N20.CNhs11220.823-25A3270.26
liver, neonate N25.CNhs11198.1368-26H1244.70
liver, neonate N30.CNhs11106.1382-42D1446.74
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G25.47
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F23.89
spleen, neonate N10.CNhs11116.752-24D19.04
spleen, neonate N20.CNhs11112.824-19H16.56
spleen, neonate N25.CNhs11099.1354-25G35.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B86.88
stomach, neonate N07.CNhs11210.718-18A928.35
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I46.12
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B311.23
whole body, neonate N00.CNhs10525.657-19C218.69
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver5.10e-2222
epithelial sac5.10e-2222
digestive gland5.10e-2222
epithelium of foregut-midgut junction5.10e-2222
anatomical boundary5.10e-2222
hepatobiliary system5.10e-2222
foregut-midgut junction5.10e-2222
hepatic diverticulum5.10e-2222
liver primordium5.10e-2222
septum transversum5.10e-2222
liver bud5.10e-2222
digestive tract diverticulum1.20e-2023
sac1.20e-2023
exocrine gland1.57e-1925
exocrine system1.57e-1925
abdomen element7.56e-1649
abdominal segment element7.56e-1649
abdominal segment of trunk7.56e-1649
abdomen7.56e-1649
trunk mesenchyme3.30e-1345
mesenchyme2.36e-0961
entire embryonic mesenchyme2.36e-0961
endocrine gland8.61e-0960
subdivision of trunk1.00e-0866
gland7.54e-0865
epithelial tube5.49e-0747
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