FFCP PHASE1:Mm9::chr5:137974398..137974426,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:137974398..137974426,-
|short_description=p2@Gnb2
|description=CAGE_peak_2_at_Gnb2_5end
|association_with_transcript=0bp_to_ENSMUST00000168746_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14693 | |EntrezGene=14693 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=E9PWM7 | |UniProt=E9PWM7 | ||
|association_with_transcript=0bp_to_ENSMUST00000168746_5end | |||
|cluster_id=chr5:137974398..137974426,- | |||
|description=CAGE_peak_2_at_Gnb2_5end | |||
|id=chr5:137974398..137974426,- | |||
|ontology_enrichment_celltype=CL:0000221!7.28e-16!44;CL:0000133!7.28e-16!44;CL:0002319!1.77e-15!43;CL:0000055!2.53e-13!50;CL:0000540!4.24e-12!33;CL:0000047!4.24e-12!33;CL:0000031!4.24e-12!33;CL:0000404!4.24e-12!33;CL:0000393!1.06e-10!39;CL:0000211!1.06e-10!39;CL:0000117!4.72e-09!23;CL:0000337!4.72e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,7.28e-16,44;CL:0000133,7.28e-16,44;CL:0002319,1.77e-15,43;CL:0000540,4.24e-12,33;CL:0000047,4.24e-12,33;CL:0000031,4.24e-12,33;CL:0000404,4.24e-12,33;CL:0000393,1.06e-10,39;CL:0000211,1.06e-10,39;CL:0000117,4.72e-09,23;CL:0000337,4.72e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.29e-14!73;UBERON:0005743!7.29e-14!73;UBERON:0000073!2.18e-13!75;UBERON:0001016!2.18e-13!75;UBERON:0004121!5.19e-11!102;UBERON:0000924!5.19e-11!102;UBERON:0006601!5.19e-11!102;UBERON:0002346!1.26e-09!71;UBERON:0003075!1.26e-09!71;UBERON:0007284!1.26e-09!71;UBERON:0003056!7.31e-08!49;UBERON:0000153!7.94e-08!94;UBERON:0001049!2.01e-07!52;UBERON:0005068!2.01e-07!52;UBERON:0006241!2.01e-07!52;UBERON:0007135!2.01e-07!52;UBERON:0007811!2.91e-07!86;UBERON:0002780!7.39e-07!39;UBERON:0001890!7.39e-07!39;UBERON:0006240!7.39e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.29e-14,73;UBERON:0001016,2.18e-13,75;UBERON:0004121,1.01e-10,95;UBERON:0000924,1.01e-10,95;UBERON:0006601,1.01e-10,95;UBERON:0002346,1.67e-09,64;UBERON:0003075,1.67e-09,64;UBERON:0007284,1.67e-09,64;UBERON:0010314,1.88e-09,92;UBERON:0003056,7.31e-08,49;UBERON:0000073,1.73e-07,54;UBERON:0001049,2.01e-07,52;UBERON:0005068,2.01e-07,52;UBERON:0006241,2.01e-07,52;UBERON:0007135,2.01e-07,52;UBERON:0010371,3.11e-07,73;UBERON:0002780,7.39e-07,39;UBERON:0001890,7.39e-07,39;UBERON:0006240,7.39e-07,39 | |||
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| ||
|short_description=p2@Gnb2 | |||
}} | }} |
Latest revision as of 14:46, 25 September 2015
Short description: | p2@Gnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gnb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_ENSMUST00000168746_5end |
EntrezGene: | Gnb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 7.28e-16 | 44 |
neurectodermal cell | 7.28e-16 | 44 |
neural cell | 1.77e-15 | 43 |
neuron | 4.24e-12 | 33 |
neuronal stem cell | 4.24e-12 | 33 |
neuroblast | 4.24e-12 | 33 |
electrically signaling cell | 4.24e-12 | 33 |
electrically responsive cell | 1.06e-10 | 39 |
electrically active cell | 1.06e-10 | 39 |
CNS neuron (sensu Vertebrata) | 4.72e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.72e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.29e-14 | 73 |
nervous system | 2.18e-13 | 75 |
ectoderm-derived structure | 1.01e-10 | 95 |
ectoderm | 1.01e-10 | 95 |
presumptive ectoderm | 1.01e-10 | 95 |
neurectoderm | 1.67e-09 | 64 |
neural plate | 1.67e-09 | 64 |
presumptive neural plate | 1.67e-09 | 64 |
structure with developmental contribution from neural crest | 1.88e-09 | 92 |
pre-chordal neural plate | 7.31e-08 | 49 |
regional part of nervous system | 1.73e-07 | 54 |
neural tube | 2.01e-07 | 52 |
neural rod | 2.01e-07 | 52 |
future spinal cord | 2.01e-07 | 52 |
neural keel | 2.01e-07 | 52 |
ecto-epithelium | 3.11e-07 | 73 |
regional part of forebrain | 7.39e-07 | 39 |
forebrain | 7.39e-07 | 39 |
future forebrain | 7.39e-07 | 39 |