FFCP PHASE1:Mm9::chr19:29326382..29326391,+: Difference between revisions
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{{FFCP|EntrezGene=16452|HGNC=|MCL_coexpression_id=7|UniProt=G5E852,Q62120|association_with_transcript=64bp_to_ENSMUST00000025705,ENSMUST00000065796,NM_001048177,NM_008413,uc008hdb.1,uc008hdc.1_5end|description=CAGE_peak_3_at_Jak2_5end|id=chr19:29326382..29326391,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,3.45e-10,6;CL:0000677,3.45e-10,6;CL:0000584,3.45e-10,6;CL:0000075,1.38e-08,7;CL:0002031,4.89e-07,25;CL:0000791,7.62e-07,9;CL:0000789,7.62e-07,9;CL:0002420,7.62e-07,9;CL:0002419,7.62e-07,9;CL:0000790,7.62e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.66e-09,15;UBERON:0001242,3.86e-09,13;UBERON:0001262,3.86e-09,13;UBERON:0004786,3.86e-09,13;UBERON:0004923,3.02e-07,24|phase1_expression=0.640595388419176,2.44282785347553,2.27499619694768,4.83942738090928,2.50447864973174,1.34303417529512,1.16806320297763,0.774739940649458,7.88416844049334,7.0219357896598,2.05461561870606,2.07407613387875,0.513602189793617,0.437102012094987,1.33243904726265,1.21485160433896,0,1.73504190947031,1.23402990245165,1.27316895539409,0.425216450755349,0.496454756004426,0.261199789138935,0.639969691173627,1.60586496747019,0,1.7230479846363,1.50829862880122,1.33016393619462,1.51218077855958,0.443461021310609,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.881277725829041,1.21652317463417,0.183546752161682,1.56478268869608,0.436050312760893,0,0.777719596297134,0.55994568650145,1.43752564364972,1.67782606057736,2.17608642603403,1.34437519656986,0.257259436035947,0.286533439938757,0,0,0.528990979272033,1.26766280701236,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,0,0.311068836925433,0.270011876663381,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.510749352340751,0.768032666281217,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0.883885756421003,0.427115042397309,0.372798891650601,0.302904773332736,0.0755715601067855,4.05810284182349,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0.280888840263504,0.511290967734173,0.259786004602869,0.70667914902068,0.563373679106722,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,0,0.91347103775248,1.29468941823586,0.148442139064825,0,0,0.230615497256059,0,0.470354828542819,0.125666591329675,0.988779870937496,0.86759614151947,0.884610551949874,0.647067399789637,0.662524555381181,0.484875253135222,0,0.878342391034642,0.41889341362691,1.02182822083437,0.599075622529601,0.599902730993408,0.508280908292259,0.449371918214468,0,0,0.173824320192276,0.255715457330331,0.62336413367868,1.1356888414743,0.305518091550949,0.870848794270651,0,0.210441855886474,0.130120442962704,0.459804208866946,0.540186389416048,0.452114453507145,1.15662048557257,0.2562274405697,0.562210347358373,0.776110112217047,0.215567992932842,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0.411564272815887,0,1.40442637462647,0.51469581422943,0.852490498186778,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0,0.771335564436891,0.697601834251224,1.07309360559848,0.350296027101508,0.16455984991348,0,0.648550476366846,0.146199987425332,0,0.671032093801859,0.630869845692382,1.02904612379284,1.98251269790279,0.264450566663544,0.213288250535234,0.696710015581316,0.257734922644187,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,1.16978452271472,0,1.08069024937347,0.995706366271836,0,0.342745537829186,0,0.407302655690628,0.387904974335251,0.210407459670956,0.252946148497029,0,0.156998727841375,0.493588655687202,0,0.500535317148282,0.589676985339609,0.224862112384854,1.01430060694251,0.241177159752417,0.25462585178142,0,0.162135226775035,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0.179397413521912,1.4473305640901,0.739012760666419,0.37898282354097,0,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.664394068946325,0.797273843287435,0.491589944147214,0.863424909329478,1.15719246865209,0,0,0,0.551873492609465,0.160550589987792,0.937693492737625,0.163934945376675,2.52470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.668396022247182,0,0.809621403349789,0.292255857911312,0.395287777946524,1.60660658210904,0.283880170416537,0,0.977321756121456,1.15479086080775,0,0.728341908464944,0,0.565815239267694,0.295301892880773,0,0.775284879504663,0.363533729477506,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0.23467170806371,0.21183207086382,1.32317038832977,0.32977250588296,0.968786560175433,0.301564624640779,0.477489376012546,0.328281799490123,2.04036585640896,0.370850604021019,1.02522528478712,0.412773735926445,1.29636169158798,0.941842285023455,0.27338845544205,0.686334519619568,2.03974115992626,1.95932033253121,2.07299960706636,0,0.158167996790568,0.406638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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16452 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=G5E852,Q62120 | |||
|association_with_transcript=64bp_to_ENSMUST00000025705,ENSMUST00000065796,NM_001048177,NM_008413,uc008hdb.1,uc008hdc.1_5end | |||
|cluster_id=chr19:29326382..29326391,+ | |||
|description=CAGE_peak_3_at_Jak2_5end | |||
|id=chr19:29326382..29326391,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.45e-10,6;CL:0000677,3.45e-10,6;CL:0000584,3.45e-10,6;CL:0000075,1.38e-08,7;CL:0002031,4.89e-07,25;CL:0000791,7.62e-07,9;CL:0000789,7.62e-07,9;CL:0002420,7.62e-07,9;CL:0002419,7.62e-07,9;CL:0000790,7.62e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.66e-09,15;UBERON:0001242,3.86e-09,13;UBERON:0001262,3.86e-09,13;UBERON:0004786,3.86e-09,13;UBERON:0004923,3.02e-07,24 | |||
|phase1_expression=0.640595388419176,2.44282785347553,2.27499619694768,4.83942738090928,2.50447864973174,1.34303417529512,1.16806320297763,0.774739940649458,7.88416844049334,7.0219357896598,2.05461561870606,2.07407613387875,0.513602189793617,0.437102012094987,1.33243904726265,1.21485160433896,0,1.73504190947031,1.23402990245165,1.27316895539409,0.425216450755349,0.496454756004426,0.261199789138935,0.639969691173627,1.60586496747019,0,1.7230479846363,1.50829862880122,1.33016393619462,1.51218077855958,0.443461021310609,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.881277725829041,1.21652317463417,0.183546752161682,1.56478268869608,0.436050312760893,0,0.777719596297134,0.55994568650145,1.43752564364972,1.67782606057736,2.17608642603403,1.34437519656986,0.257259436035947,0.286533439938757,0,0,0.528990979272033,1.26766280701236,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,0,0.311068836925433,0.270011876663381,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.510749352340751,0.768032666281217,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0.883885756421003,0.427115042397309,0.372798891650601,0.302904773332736,0.0755715601067855,4.05810284182349,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0.280888840263504,0.511290967734173,0.259786004602869,0.70667914902068,0.563373679106722,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,0,0.91347103775248,1.29468941823586,0.148442139064825,0,0,0.230615497256059,0,0.470354828542819,0.125666591329675,0.988779870937496,0.86759614151947,0.884610551949874,0.647067399789637,0.662524555381181,0.484875253135222,0,0.878342391034642,0.41889341362691,1.02182822083437,0.599075622529601,0.599902730993408,0.508280908292259,0.449371918214468,0,0,0.173824320192276,0.255715457330331,0.62336413367868,1.1356888414743,0.305518091550949,0.870848794270651,0,0.210441855886474,0.130120442962704,0.459804208866946,0.540186389416048,0.452114453507145,1.15662048557257,0.2562274405697,0.562210347358373,0.776110112217047,0.215567992932842,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0.411564272815887,0,1.40442637462647,0.51469581422943,0.852490498186778,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0,0.771335564436891,0.697601834251224,1.07309360559848,0.350296027101508,0.16455984991348,0,0.648550476366846,0.146199987425332,0,0.671032093801859,0.630869845692382,1.02904612379284,1.98251269790279,0.264450566663544,0.213288250535234,0.696710015581316,0.257734922644187,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,1.16978452271472,0,1.08069024937347,0.995706366271836,0,0.342745537829186,0,0.407302655690628,0.387904974335251,0.210407459670956,0.252946148497029,0,0.156998727841375,0.493588655687202,0,0.500535317148282,0.589676985339609,0.224862112384854,1.01430060694251,0.241177159752417,0.25462585178142,0,0.162135226775035,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0.179397413521912,1.4473305640901,0.739012760666419,0.37898282354097,0,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.664394068946325,0.797273843287435,0.491589944147214,0.863424909329478,1.15719246865209,0,0,0,0.551873492609465,0.160550589987792,0.937693492737625,0.163934945376675,2.52470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.668396022247182,0,0.809621403349789,0.292255857911312,0.395287777946524,1.60660658210904,0.283880170416537,0,0.977321756121456,1.15479086080775,0,0.728341908464944,0,0.565815239267694,0.295301892880773,0,0.775284879504663,0.363533729477506,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0.23467170806371,0.21183207086382,1.32317038832977,0.32977250588296,0.968786560175433,0.301564624640779,0.477489376012546,0.328281799490123,2.04036585640896,0.370850604021019,1.02522528478712,0.412773735926445,1.29636169158798,0.941842285023455,0.27338845544205,0.686334519619568,2.03974115992626,1.95932033253121,2.07299960706636,0,0.158167996790568,0.406638934253697,0.540026704109006,0.836353184057875,0,0.404593039154462,0.495920734352016,0.785267825952089,0.648074866458964,0,0,0.149516546043979,0,0.194451188344048,0,0,0.469428954583016,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,0,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.302478555410522,0.584747284438515,0.288635524920988,0.584384510907845,0.453460767230423,0,0.358855426437903,0.167884616364078,1.15913756419314,1.68914227906064,2.56412273974171,0,0,0,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0,0.906284817968409,1.03552062350364,0.415149390336707,0.798049746802062,0.341467211508268,0.243106717068294,0.419226325255965,0.55153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| |||
|short_description=p3@Jak2 | |||
}} |
Latest revision as of 14:11, 25 September 2015
Short description: | p3@Jak2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Jak2_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 64bp_to_ENSMUST00000025705, ENSMUST00000065796, NM_001048177, NM_008413, uc008hdb.1, uc008hdc.1_5end |
EntrezGene: | Jak2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.45e-10 | 6 |
gut absorptive cell | 3.45e-10 | 6 |
enterocyte | 3.45e-10 | 6 |
columnar/cuboidal epithelial cell | 1.38e-08 | 7 |
hematopoietic lineage restricted progenitor cell | 4.89e-07 | 25 |
mature alpha-beta T cell | 7.62e-07 | 9 |
alpha-beta T cell | 7.62e-07 | 9 |
immature T cell | 7.62e-07 | 9 |
mature T cell | 7.62e-07 | 9 |
immature alpha-beta T cell | 7.62e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.66e-09 | 15 |
intestinal mucosa | 3.86e-09 | 13 |
wall of intestine | 3.86e-09 | 13 |
gastrointestinal system mucosa | 3.86e-09 | 13 |
organ component layer | 3.02e-07 | 24 |