FFCP PHASE1:Mm9::chr8:44392374..44392389,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22702|HGNC=|MCL_coexpression_id=97|UniProt=E9QK22,P22227|association_with_transcript=-11bp_to_ENSMUST00000082120,NM_009556,uc009lob.2,uc009loc.2,uc009lod.2_5end|description=CAGE_peak_2_at_Zfp42_5end|id=chr8:44392374..44392389,-|ontology_enrichment_celltype=CL:0000349!2.22e-18!3;CL:0000351!2.22e-18!3;CL:0000197!9.34e-12!2;CL:0002491!9.34e-12!2;CL:0000098!9.34e-12!2;CL:0000710!8.98e-07!1;CL:0002077!8.98e-07!1;CL:0005014!8.98e-07!1;CL:0002315!8.98e-07!1;CL:0002490!8.98e-07!1|ontology_enrichment_celltype_v019_2=CL:0000349,4.90e-53,3;CL:0000351,4.90e-53,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!2.22e-18!3;UBERON:0000307!2.22e-18!3;UBERON:0005631!7.20e-18!3;UBERON:0000478!7.20e-18!3;UBERON:0000158!7.20e-18!3;UBERON:0001987!1.56e-12!2;UBERON:0003124!1.56e-12!2;UBERON:0004340!1.56e-12!2;UBERON:0003465!9.34e-12!2;UBERON:0008193!9.34e-12!2;UBERON:0000032!9.34e-12!2;UBERON:0005744!9.34e-12!2;UBERON:0008001!9.34e-12!2;UBERON:0007497!9.34e-12!2;UBERON:0009955!9.34e-12!2;UBERON:0003067!9.34e-12!2;UBERON:0002546!9.34e-12!2;UBERON:0007914!9.34e-12!2;UBERON:0003457!9.34e-12!2;UBERON:0004766!9.34e-12!2;UBERON:0005253!9.34e-12!2;UBERON:0002227!9.34e-12!2;UBERON:0001846!9.34e-12!2;UBERON:0003128!9.34e-12!2;UBERON:0002241!9.34e-12!2;UBERON:0002105!9.34e-12!2;UBERON:0001678!9.34e-12!2;UBERON:0003129!9.34e-12!2;UBERON:0001694!9.34e-12!2;UBERON:0004681!9.34e-12!2;UBERON:0001839!9.34e-12!2;UBERON:0001690!9.34e-12!2;UBERON:0001844!9.34e-12!2;UBERON:0001849!9.34e-12!2;UBERON:0002499!9.34e-12!2;UBERON:0005944!9.34e-12!2;UBERON:0001855!9.34e-12!2;UBERON:0001703!9.34e-12!2;UBERON:0003069!9.34e-12!2;UBERON:0003051!9.34e-12!2;UBERON:0004288!9.34e-12!2;UBERON:0004637!9.34e-12!2;UBERON:0004761!9.34e-12!2;UBERON:0010113!9.34e-12!2;UBERON:0003089!9.34e-12!2;UBERON:0009123!9.34e-12!2;UBERON:0009617!9.34e-12!2;UBERON:0005641!9.34e-12!2;UBERON:0003133!5.06e-08!24;UBERON:0005156!2.26e-07!26;UBERON:0000990!2.26e-07!26;UBERON:0000305!5.34e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.90e-53,3;UBERON:0000307,4.90e-53,3;UBERON:0007010,4.90e-53,3;UBERON:0001987,4.75e-35,2;UBERON:0003124,4.75e-35,2;UBERON:0004340,4.75e-35,2;UBERON:0005631,8.72e-24,3;UBERON:0000478,8.72e-24,3;UBERON:0000158,8.72e-24,3;UBERON:0005795,3.89e-18,4;UBERON:0000995,3.89e-18,4;UBERON:0003975,9.80e-15,5;UBERON:0003134,1.32e-09,8;UBERON:0004175,1.20e-08,9;UBERON:0000474,1.20e-08,9;UBERON:0003100,3.00e-07,11|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,1.0591603543191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.299033092087958,0.66183396182839,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3212836220773,14.1747893442972,8.05846158547577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Zfp42}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22702 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|TSSclassifier=NA | |||
|UniProt=E9QK22,P22227 | |||
|association_with_transcript=-11bp_to_ENSMUST00000082120,NM_009556,uc009lob.2,uc009loc.2,uc009lod.2_5end | |||
|cluster_id=chr8:44392374..44392389,- | |||
|description=CAGE_peak_2_at_Zfp42_5end | |||
|id=chr8:44392374..44392389,- | |||
|ontology_enrichment_celltype=CL:0000349!2.22e-18!3;CL:0000351!2.22e-18!3;CL:0000197!9.34e-12!2;CL:0002491!9.34e-12!2;CL:0000098!9.34e-12!2;CL:0000710!8.98e-07!1;CL:0002077!8.98e-07!1;CL:0005014!8.98e-07!1;CL:0002315!8.98e-07!1;CL:0002490!8.98e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.90e-53,3;CL:0000351,4.90e-53,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!2.22e-18!3;UBERON:0000307!2.22e-18!3;UBERON:0005631!7.20e-18!3;UBERON:0000478!7.20e-18!3;UBERON:0000158!7.20e-18!3;UBERON:0001987!1.56e-12!2;UBERON:0003124!1.56e-12!2;UBERON:0004340!1.56e-12!2;UBERON:0003465!9.34e-12!2;UBERON:0008193!9.34e-12!2;UBERON:0000032!9.34e-12!2;UBERON:0005744!9.34e-12!2;UBERON:0008001!9.34e-12!2;UBERON:0007497!9.34e-12!2;UBERON:0009955!9.34e-12!2;UBERON:0003067!9.34e-12!2;UBERON:0002546!9.34e-12!2;UBERON:0007914!9.34e-12!2;UBERON:0003457!9.34e-12!2;UBERON:0004766!9.34e-12!2;UBERON:0005253!9.34e-12!2;UBERON:0002227!9.34e-12!2;UBERON:0001846!9.34e-12!2;UBERON:0003128!9.34e-12!2;UBERON:0002241!9.34e-12!2;UBERON:0002105!9.34e-12!2;UBERON:0001678!9.34e-12!2;UBERON:0003129!9.34e-12!2;UBERON:0001694!9.34e-12!2;UBERON:0004681!9.34e-12!2;UBERON:0001839!9.34e-12!2;UBERON:0001690!9.34e-12!2;UBERON:0001844!9.34e-12!2;UBERON:0001849!9.34e-12!2;UBERON:0002499!9.34e-12!2;UBERON:0005944!9.34e-12!2;UBERON:0001855!9.34e-12!2;UBERON:0001703!9.34e-12!2;UBERON:0003069!9.34e-12!2;UBERON:0003051!9.34e-12!2;UBERON:0004288!9.34e-12!2;UBERON:0004637!9.34e-12!2;UBERON:0004761!9.34e-12!2;UBERON:0010113!9.34e-12!2;UBERON:0003089!9.34e-12!2;UBERON:0009123!9.34e-12!2;UBERON:0009617!9.34e-12!2;UBERON:0005641!9.34e-12!2;UBERON:0003133!5.06e-08!24;UBERON:0005156!2.26e-07!26;UBERON:0000990!2.26e-07!26;UBERON:0000305!5.34e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.90e-53,3;UBERON:0000307,4.90e-53,3;UBERON:0007010,4.90e-53,3;UBERON:0001987,4.75e-35,2;UBERON:0003124,4.75e-35,2;UBERON:0004340,4.75e-35,2;UBERON:0005631,8.72e-24,3;UBERON:0000478,8.72e-24,3;UBERON:0000158,8.72e-24,3;UBERON:0005795,3.89e-18,4;UBERON:0000995,3.89e-18,4;UBERON:0003975,9.80e-15,5;UBERON:0003134,1.32e-09,8;UBERON:0004175,1.20e-08,9;UBERON:0000474,1.20e-08,9;UBERON:0003100,3.00e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,1.0591603543191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.299033092087958,0.66183396182839,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3212836220773,14.1747893442972,8.05846158547577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Zfp42 | |||
}} |
Latest revision as of 13:39, 25 September 2015
Short description: | p2@Zfp42 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp42_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | -11bp_to_ENSMUST00000082120, NM_009556, uc009lob.2, uc009loc.2, uc009lod.2_5end |
EntrezGene: | Zfp42 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.90e-53 | 3 |
trophoblast cell | 4.90e-53 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 4.90e-53 | 3 |
blastula | 4.90e-53 | 3 |
cleaving embryo | 4.90e-53 | 3 |
placenta | 4.75e-35 | 2 |
chorion | 4.75e-35 | 2 |
allantois | 4.75e-35 | 2 |
extraembryonic membrane | 8.72e-24 | 3 |
extraembryonic structure | 8.72e-24 | 3 |
membranous layer | 8.72e-24 | 3 |
embryonic uterus | 3.89e-18 | 4 |
uterus | 3.89e-18 | 4 |
internal female genitalia | 9.80e-15 | 5 |
female reproductive organ | 1.32e-09 | 8 |
internal genitalia | 1.20e-08 | 9 |
female reproductive system | 1.20e-08 | 9 |
female organism | 3.00e-07 | 11 |