FFCP PHASE1:Mm9::chr5:136254335..136254341,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17448 | |EntrezGene=17448 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=P08249 | |UniProt=P08249 | ||
|association_with_transcript=-8bp_to_ENSMUST00000019323_5end | |association_with_transcript=-8bp_to_ENSMUST00000019323_5end | ||
|cluster_id=chr5:136254335..136254341,+ | |||
|description=CAGE_peak_5_at_Mdh2_5end | |description=CAGE_peak_5_at_Mdh2_5end | ||
|id=chr5:136254335..136254341,+ | |id=chr5:136254335..136254341,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.83e-07,25;CL:0000223,6.25e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.87e-09!15;UBERON:0001242!1.28e-07!13;UBERON:0000060!1.28e-07!13;UBERON:0001262!1.28e-07!13;UBERON:0004786!1.28e-07!13;UBERON:0000160!5.72e-07!43 | |ontology_enrichment_uberon=UBERON:0000344!6.87e-09!15;UBERON:0001242!1.28e-07!13;UBERON:0000060!1.28e-07!13;UBERON:0001262!1.28e-07!13;UBERON:0004786!1.28e-07!13;UBERON:0000160!5.72e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.35e-13,31;UBERON:0000344,7.41e-10,15;UBERON:0005409,6.93e-09,47;UBERON:0001242,2.09e-08,13;UBERON:0001262,2.09e-08,13;UBERON:0004786,2.09e-08,13 | |||
|phase1_expression=0.960893082628764,238.001228010044,232.049612088663,212.632340548702,252.952343622905,45.3274034162102,29.2015800744407,0.903863264091034,1.68946466582,0.70219357896598,0.171217968225505,0.717949430958028,0.684802919724823,0.874204024189974,0.666219523631325,0.809901069559304,0,1.41957974411207,1.09691546884591,3.81950686618227,1.02051948181284,0.297872853602656,0.783599367416806,123.194165550923,96.1224887671442,148.151846741675,108.982785028246,114.630695788893,23.1828571736776,57.4628695852642,15.5211357458713,1.27006134691926,1.23012957516914,0,0.577703239502549,5.98444723290572,3.47087905646027,23.0192396905299,12.5013655123808,17.2762835511353,29.4115744015507,23.9065919735456,21.8479658864019,0.125896817975577,0.304130793658544,0.367093504323363,0.782391344348039,3.05235218932625,1.31811709640683,2.52758868796568,1.25987779462826,1.43752564364972,1.67782606057736,1.45072428402269,1.34437519656986,0.771778308107841,1.43266719969378,0.515672092277442,1.01158230429799,0,1.26766280701236,1.69422266034566,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0,1.03689612308478,0.810035629990144,1.89292465216244,1.42825492201902,0.883474163806454,0.122490799214954,1.24599112323707,0,0,1.40456071893706,0.768032666281217,0,0.823388792421687,0,1.3959149950069,0.56276261003168,0.30559649555362,1.76777151284201,0.711858403995515,0.372798891650601,0.984440513331393,1.28471652181535,1.73918693221007,5.16254326188832,8.83962733820076,0.539703191637817,6.49776417447669,4.92829575807069,8.00533194750986,0.170430322578058,0.519572009205738,0,0.14084341977668,1.28326477414318,0,7.11066703153331,1.94841936910093,3.80039798212648,1.01104889002957,22.7225920640929,0.258937883647172,2.22663208597237,1.73485326766136,2.13125834818499,1.15307748628029,1.65794904607885,1.17588707135705,2.38766523526383,0.988779870937496,3.61498392299779,3.5384422077995,0.808834249737046,2.42925670306433,0.969750506270444,0,0.292780797011547,0.41889341362691,77.1480306729946,0.718890747035522,1.19980546198682,0,0.599162557619291,0.915001205637253,2.01046963380583,1.91206752211504,1.02286182932132,0.41557608911912,0.486723789203273,1.01839363850316,0.373220911830279,0.252722758433675,1.05220927943237,0.650602214813519,0.229902104433473,0.720248519221397,0.30140963567143,0.204109497453984,0,0.281105173679186,0.517406741478031,0.646703978798527,0.378212160335639,0.527853372491847,0.43839146485515,1.11218899690239,0,0.411564272815887,0.398068533636986,1.40442637462647,0.51469581422943,1.13665399758237,0.621377317606506,0.938104239924385,1.08037236876609,0.710234206755631,0.590292695242212,0.617068451549513,1.39520366850245,1.3413670069981,0.467061369468678,0.16455984991348,1.14917224855367,1.86458261955468,1.02339991197733,3.29325172936576,1.74468344388483,1.89260953707715,0.102904612379284,325.462501239041,165.546054731379,1.06644125267617,0.232236671860439,0.515469845288373,1.21010114774006,2.66853652613844,2.47293313946327,75.4501207855773,4.94096864172033,3.2673577144035,3.18330355265841,3.8992817423824,79.0961079615715,70.8932803588997,98.176647714403,2.27601481143698,0.456994050438915,0,1.83286195060783,1.55161989734101,1.05203729835478,1.13825766823663,1.77132177575523,2.04098346193787,4.31890073726302,4.44678940630723,1.50160595144485,1.17935397067922,0.674586337154561,0.811440485554012,0.482354319504834,1.52775511068852,1.72617682470486,1.45921704097532,2.74561413188081,1.43768206527355,0.744281895337007,2.18426371180192,3.28352541331245,3.22915344339442,11.5786445127208,0.554259570499814,0.37898282354097,0.651859905768103,0.339490171550376,0.234690248288502,0.335012514883631,1.19021820443007,0.585400943573396,0.630540576424764,0,0.478364305972461,0.81931657357869,1.55416483679306,0.433947175744535,3.01582567878545,1.63171705145613,0,0.275936746304732,1.12385412991454,1.05490517932983,0.491804836130026,1.51482556322624,0.315508219416257,0.780877488593277,0.430846795465598,1.43381278771531,1.33679204449436,1.13230612315533,0,0.584511715822624,1.18586333383957,0.321321316421807,1.70328102249922,1.95872164033981,1.30309567482861,1.31976098378028,0,0.485561272309963,2.11626489875326,0.188605079755898,0.590603785761546,1.22974059177571,2.32585463851399,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.36012218806262,0.905510786479282,0.214337035031592,0.177340233642274,1.24858172321449,0.658196082408484,1.2178597964584,1.17335854031855,0.847328283455281,0.661585194164886,0.65954501176592,0.161464426695906,0.603129249281559,0.358117032009409,0.820704498725306,27.399198643206,1.11255181206306,3.2465467351592,1.03193433981611,1.11116716421827,0,0.956859594047176,1.37266903923914,0.169978429993855,0.839708713941948,0.138199973804424,2.86401185404534,1.10717597753397,0.609958401380546,0.216010681643603,0.209088296014469,0.218362563746178,0.674321731924103,0.661227645802687,2.35580347785627,1.8146096260851,0,1.12738587736838,1.19613236835183,1.65458490457098,0.972255941720238,0.516639293910924,0.506868376472335,0.821500670520278,0.781226309063701,0.943734099831398,0.241584120826006,0.288030006257865,0.948033361884535,0.405450430580328,1.23253148597793,1.55904987573354,1.25318686967237,0.39736270956253,0.961563596159751,0.738447635872886,0.706765149637033,0.838274873204998,0.403304740547362,1.46186821109629,1.15454209968395,0.701261413089414,2.0405734525369,2.21985953374065,2.24284641523689,1.67884616364078,0.19318959403219,0.375364950902364,0.915758121336325,1.07184189539533,0.501572104035363,3.3885110557024,2.76195141904306,3.43737308063638,1.89038500578056,1.37016503954128,1.5107877947794,0,0,0.906284817968409,0.51776031175182,0.518936737920883,0,0.341467211508268,0.243106717068294,0.838452650511929,0.919217542250071,1.55572709461131,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,1.13175804831646,1.21733959710847,0.960377286073039,1.20614484806788,0.476293691283074,1.0429589335037,0.964546102318525,1.64834360321323,1.03039244094078,1.37147700954166,0.354951612318675,0.953744759789284,1.0174249164263,0.941093804153306,1.09998990259179,1.09756783723664,0.526139422875686,1.35804113845862,1.12228454331548,1.66089025373844,0.689531376628944,0.818462086339379,0.619747364743864,0.771626443924566,1.49886346762768,0.935726433781634,0.644613162144895,0.57386499620653,1.32354851471709,1.15933917810211 | |phase1_expression=0.960893082628764,238.001228010044,232.049612088663,212.632340548702,252.952343622905,45.3274034162102,29.2015800744407,0.903863264091034,1.68946466582,0.70219357896598,0.171217968225505,0.717949430958028,0.684802919724823,0.874204024189974,0.666219523631325,0.809901069559304,0,1.41957974411207,1.09691546884591,3.81950686618227,1.02051948181284,0.297872853602656,0.783599367416806,123.194165550923,96.1224887671442,148.151846741675,108.982785028246,114.630695788893,23.1828571736776,57.4628695852642,15.5211357458713,1.27006134691926,1.23012957516914,0,0.577703239502549,5.98444723290572,3.47087905646027,23.0192396905299,12.5013655123808,17.2762835511353,29.4115744015507,23.9065919735456,21.8479658864019,0.125896817975577,0.304130793658544,0.367093504323363,0.782391344348039,3.05235218932625,1.31811709640683,2.52758868796568,1.25987779462826,1.43752564364972,1.67782606057736,1.45072428402269,1.34437519656986,0.771778308107841,1.43266719969378,0.515672092277442,1.01158230429799,0,1.26766280701236,1.69422266034566,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0,1.03689612308478,0.810035629990144,1.89292465216244,1.42825492201902,0.883474163806454,0.122490799214954,1.24599112323707,0,0,1.40456071893706,0.768032666281217,0,0.823388792421687,0,1.3959149950069,0.56276261003168,0.30559649555362,1.76777151284201,0.711858403995515,0.372798891650601,0.984440513331393,1.28471652181535,1.73918693221007,5.16254326188832,8.83962733820076,0.539703191637817,6.49776417447669,4.92829575807069,8.00533194750986,0.170430322578058,0.519572009205738,0,0.14084341977668,1.28326477414318,0,7.11066703153331,1.94841936910093,3.80039798212648,1.01104889002957,22.7225920640929,0.258937883647172,2.22663208597237,1.73485326766136,2.13125834818499,1.15307748628029,1.65794904607885,1.17588707135705,2.38766523526383,0.988779870937496,3.61498392299779,3.5384422077995,0.808834249737046,2.42925670306433,0.969750506270444,0,0.292780797011547,0.41889341362691,77.1480306729946,0.718890747035522,1.19980546198682,0,0.599162557619291,0.915001205637253,2.01046963380583,1.91206752211504,1.02286182932132,0.41557608911912,0.486723789203273,1.01839363850316,0.373220911830279,0.252722758433675,1.05220927943237,0.650602214813519,0.229902104433473,0.720248519221397,0.30140963567143,0.204109497453984,0,0.281105173679186,0.517406741478031,0.646703978798527,0.378212160335639,0.527853372491847,0.43839146485515,1.11218899690239,0,0.411564272815887,0.398068533636986,1.40442637462647,0.51469581422943,1.13665399758237,0.621377317606506,0.938104239924385,1.08037236876609,0.710234206755631,0.590292695242212,0.617068451549513,1.39520366850245,1.3413670069981,0.467061369468678,0.16455984991348,1.14917224855367,1.86458261955468,1.02339991197733,3.29325172936576,1.74468344388483,1.89260953707715,0.102904612379284,325.462501239041,165.546054731379,1.06644125267617,0.232236671860439,0.515469845288373,1.21010114774006,2.66853652613844,2.47293313946327,75.4501207855773,4.94096864172033,3.2673577144035,3.18330355265841,3.8992817423824,79.0961079615715,70.8932803588997,98.176647714403,2.27601481143698,0.456994050438915,0,1.83286195060783,1.55161989734101,1.05203729835478,1.13825766823663,1.77132177575523,2.04098346193787,4.31890073726302,4.44678940630723,1.50160595144485,1.17935397067922,0.674586337154561,0.811440485554012,0.482354319504834,1.52775511068852,1.72617682470486,1.45921704097532,2.74561413188081,1.43768206527355,0.744281895337007,2.18426371180192,3.28352541331245,3.22915344339442,11.5786445127208,0.554259570499814,0.37898282354097,0.651859905768103,0.339490171550376,0.234690248288502,0.335012514883631,1.19021820443007,0.585400943573396,0.630540576424764,0,0.478364305972461,0.81931657357869,1.55416483679306,0.433947175744535,3.01582567878545,1.63171705145613,0,0.275936746304732,1.12385412991454,1.05490517932983,0.491804836130026,1.51482556322624,0.315508219416257,0.780877488593277,0.430846795465598,1.43381278771531,1.33679204449436,1.13230612315533,0,0.584511715822624,1.18586333383957,0.321321316421807,1.70328102249922,1.95872164033981,1.30309567482861,1.31976098378028,0,0.485561272309963,2.11626489875326,0.188605079755898,0.590603785761546,1.22974059177571,2.32585463851399,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.36012218806262,0.905510786479282,0.214337035031592,0.177340233642274,1.24858172321449,0.658196082408484,1.2178597964584,1.17335854031855,0.847328283455281,0.661585194164886,0.65954501176592,0.161464426695906,0.603129249281559,0.358117032009409,0.820704498725306,27.399198643206,1.11255181206306,3.2465467351592,1.03193433981611,1.11116716421827,0,0.956859594047176,1.37266903923914,0.169978429993855,0.839708713941948,0.138199973804424,2.86401185404534,1.10717597753397,0.609958401380546,0.216010681643603,0.209088296014469,0.218362563746178,0.674321731924103,0.661227645802687,2.35580347785627,1.8146096260851,0,1.12738587736838,1.19613236835183,1.65458490457098,0.972255941720238,0.516639293910924,0.506868376472335,0.821500670520278,0.781226309063701,0.943734099831398,0.241584120826006,0.288030006257865,0.948033361884535,0.405450430580328,1.23253148597793,1.55904987573354,1.25318686967237,0.39736270956253,0.961563596159751,0.738447635872886,0.706765149637033,0.838274873204998,0.403304740547362,1.46186821109629,1.15454209968395,0.701261413089414,2.0405734525369,2.21985953374065,2.24284641523689,1.67884616364078,0.19318959403219,0.375364950902364,0.915758121336325,1.07184189539533,0.501572104035363,3.3885110557024,2.76195141904306,3.43737308063638,1.89038500578056,1.37016503954128,1.5107877947794,0,0,0.906284817968409,0.51776031175182,0.518936737920883,0,0.341467211508268,0.243106717068294,0.838452650511929,0.919217542250071,1.55572709461131,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,1.13175804831646,1.21733959710847,0.960377286073039,1.20614484806788,0.476293691283074,1.0429589335037,0.964546102318525,1.64834360321323,1.03039244094078,1.37147700954166,0.354951612318675,0.953744759789284,1.0174249164263,0.941093804153306,1.09998990259179,1.09756783723664,0.526139422875686,1.35804113845862,1.12228454331548,1.66089025373844,0.689531376628944,0.818462086339379,0.619747364743864,0.771626443924566,1.49886346762768,0.935726433781634,0.644613162144895,0.57386499620653,1.32354851471709,1.15933917810211 | ||
|short_description=p5@Mdh2 | |short_description=p5@Mdh2 | ||
}} | }} |
Latest revision as of 13:33, 25 September 2015
Short description: | p5@Mdh2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mdh2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -8bp_to_ENSMUST00000019323_5end |
EntrezGene: | Mdh2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.83e-07 | 25 |
endodermal cell | 6.25e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.35e-13 | 31 |
mucosa | 7.41e-10 | 15 |
gastrointestinal system | 6.93e-09 | 47 |
intestinal mucosa | 2.09e-08 | 13 |
wall of intestine | 2.09e-08 | 13 |
gastrointestinal system mucosa | 2.09e-08 | 13 |