FFCP PHASE1:Hg19::chr17:46799872..46799887,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84366 | |EntrezGene=84366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30591 | |HGNC=30591 | ||
|TSSclassifier=strong | |||
|UniProt=Q96KF2 | |UniProt=Q96KF2 | ||
|association_with_transcript=0bp_to_ENST00000290294,NM_032391,uc002iny.2_5end | |association_with_transcript=0bp_to_ENST00000290294,NM_032391,uc002iny.2_5end | ||
|cluster_id=chr17:46799872..46799887,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_1_at_PRAC_5end | |description=CAGE_peak_1_at_PRAC_5end | ||
|id=chr17:46799872..46799887,- | |id=chr17:46799872..46799887,- | ||
|ontology_enrichment_celltype=CL:0000244!4.89e-15!4;CL:0000731!4.89e-15!4 | |ontology_enrichment_celltype=CL:0000244!4.89e-15!4;CL:0000731!4.89e-15!4 | ||
|ontology_enrichment_celltype_v019=CL:0000244;6.62e-27;4!CL:0000731;6.62e-27;4!CL:0002231;1.44e-09;3!CL:0000039;1.20e-08;7!CL:0000586;1.20e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,6.62e-27,4;CL:0000731,6.62e-27,4;CL:0002231,1.44e-09,3;CL:0000039,1.19e-08,7;CL:0000586,1.19e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.06e-09;3!UBERON:0003353;1.06e-09;3 | |||
|ontology_enrichment_disease=DOID:3095!1.48e-14!22;DOID:2994!1.48e-14!22;DOID:171!5.27e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.15e-28;22!DOID:2994;3.15e-28;22!DOID:171;4.32e-24;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.10e-28,22;DOID:2994,3.10e-28,22;DOID:171,4.32e-24,10 | |||
|ontology_enrichment_uberon=UBERON:0001046!3.44e-16!19;UBERON:0000162!1.28e-14!14;UBERON:0001353!1.28e-14!14;UBERON:0000163!1.28e-14!14;UBERON:0006866!1.28e-14!14;UBERON:0000164!1.28e-14!14;UBERON:0000931!1.28e-14!14;UBERON:0003101!8.29e-14!22;UBERON:0000079!8.29e-14!22;UBERON:0001008!1.11e-13!45;UBERON:0004122!1.50e-13!15;UBERON:0006554!3.89e-12!44;UBERON:0000365!4.98e-12!5;UBERON:0002367!6.83e-11!11;UBERON:0010147!6.83e-11!11;UBERON:0009846!6.83e-11!11;UBERON:0003353!6.83e-11!11;UBERON:0004902!6.83e-11!11;UBERON:0003820!6.83e-11!11;UBERON:0009847!6.83e-11!11;UBERON:0000059!1.29e-10!11;UBERON:0005910!5.09e-10!6;UBERON:0003937!6.36e-10!12;UBERON:0005399!6.36e-10!12;UBERON:0003064!8.56e-09!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.09e-27;4!UBERON:0000923;1.09e-27;4!UBERON:0010316;1.09e-27;4!UBERON:0005291;1.09e-27;4!UBERON:0002050;3.38e-22;5!UBERON:0005423;3.38e-22;5!UBERON:0000365;1.42e-21;5!UBERON:0005910;5.13e-18;6!UBERON:0003101;1.93e-13;22!UBERON:0000079;1.93e-13;22!UBERON:0002367;1.18e-09;11!UBERON:0010147;1.18e-09;11!UBERON:0000059;1.39e-09;11!UBERON:0000486;4.46e-09;12!UBERON:0003937;7.37e-09;12!UBERON:0005399;7.37e-09;12!UBERON:0000077;5.18e-08;27!UBERON:0000473;1.27e-07;8!UBERON:0000996;1.87e-07;1!UBERON:0001155;5.21e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.42e-21,5;UBERON:0005910,5.13e-18,6;UBERON:0000162,6.38e-16,14;UBERON:0001353,6.38e-16,14;UBERON:0000163,6.38e-16,14;UBERON:0006866,6.38e-16,14;UBERON:0000164,6.38e-16,14;UBERON:0000931,6.38e-16,14;UBERON:0001046,1.23e-15,19;UBERON:0004122,7.92e-15,15;UBERON:0003101,1.91e-13,22;UBERON:0000079,1.91e-13,22;UBERON:0001008,8.97e-12,48;UBERON:0006554,8.36e-10,47;UBERON:0002367,1.18e-09,11;UBERON:0010147,1.18e-09,11;UBERON:0009846,1.18e-09,11;UBERON:0003353,1.18e-09,11;UBERON:0004902,1.18e-09,11;UBERON:0003820,1.18e-09,11;UBERON:0009847,1.18e-09,11;UBERON:0000059,1.39e-09,11;UBERON:0003937,7.37e-09,12;UBERON:0005399,7.37e-09,12;UBERON:0003064,1.05e-07,28;UBERON:0000473,1.25e-07,8;UBERON:0000996,1.87e-07,1;UBERON:0000077,2.02e-07,29;UBERON:0005156,2.79e-07,59;UBERON:0000990,2.79e-07,59;UBERON:0001155,5.21e-07,9 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508681776931463,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85904935471983,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,38.8982552388373,36.7403145854226,0,0,0.524497659837696,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.192444225451024,0,0,0,63.2842897826708,84.2357378338128,146.77538082064,79.7140198718149,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,43.3645890163065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,2.36744173528641,0,0,0,0,0,0,0,0,0,0,0,0,200.915578621062,0,0,0,0,0,0,0,0,0,1.15425387755696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.7488823471608,5.13053874119367,74.5456776819023,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,99.5493411947824,0,477.287874230719,729.557125788976,124.18363578752,216.754228173619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,666.200273634243,0,0,0,0,0,0,0,0,0,0,0,138.594326757518,17.7394389842162,0,0.280272163313789,23.7421267332469,0,0,0,0,65.6764053329908,37.205670272752,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,1.71603825227734,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4164530991208,7.54717340090665,2.93939145792117,20.3087727972007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,1.33151354837103,0,0 | ||
|short_description=p1@PRAC | |short_description=p1@PRAC | ||
}} | }} |
Latest revision as of 07:40, 25 September 2015
Short description: | p1@PRAC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRAC_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 0bp_to_ENST00000290294, NM_032391, uc002iny.2_5end |
EntrezGene: | PRAC |
HGNC: | 30591 |
UniProt: | Q96KF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 6.62e-27 | 4 |
urothelial cell | 6.62e-27 | 4 |
epithelial cell of prostate | 1.44e-09 | 3 |
germ line cell | 1.19e-08 | 7 |
germ cell | 1.19e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.42e-21 | 5 |
transitional epithelium | 5.13e-18 | 6 |
cloaca | 6.38e-16 | 14 |
anal region | 6.38e-16 | 14 |
embryonic cloaca | 6.38e-16 | 14 |
terminal part of digestive tract | 6.38e-16 | 14 |
primitive urogenital sinus | 6.38e-16 | 14 |
proctodeum | 6.38e-16 | 14 |
hindgut | 1.23e-15 | 19 |
genitourinary system | 7.92e-15 | 15 |
male organism | 1.91e-13 | 22 |
male reproductive system | 1.91e-13 | 22 |
renal system | 8.97e-12 | 48 |
urinary system structure | 8.36e-10 | 47 |
prostate gland | 1.18e-09 | 11 |
male accessory sex gland | 1.18e-09 | 11 |
embryonic cloacal epithelium | 1.18e-09 | 11 |
epithelium of hindgut | 1.18e-09 | 11 |
urogenital sinus epithelium | 1.18e-09 | 11 |
prostate bud | 1.18e-09 | 11 |
prostate field | 1.18e-09 | 11 |
large intestine | 1.39e-09 | 11 |
sex gland | 7.37e-09 | 12 |
male reproductive gland | 7.37e-09 | 12 |
intermediate mesoderm | 1.05e-07 | 28 |
testis | 1.25e-07 | 8 |
vagina | 1.87e-07 | 1 |
mixed endoderm/mesoderm-derived structure | 2.02e-07 | 29 |
reproductive structure | 2.79e-07 | 59 |
reproductive system | 2.79e-07 | 59 |
colon | 5.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.10e-28 | 22 |
germ cell cancer | 3.10e-28 | 22 |
neuroectodermal tumor | 4.32e-24 | 10 |