FFCP PHASE1:Hg19::chr2:231988543..231988550,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3357 | |EntrezGene=3357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5294 | |HGNC=5294 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZU1 | |UniProt=F5GZU1 | ||
|association_with_transcript=-65bp_to_ENST00000540289_5end | |association_with_transcript=-65bp_to_ENST00000540289_5end | ||
|cluster_id=chr2:231988543..231988550,- | |||
|coexpression_cluster_id=C940 | |coexpression_cluster_id=C940 | ||
|description=CAGE_peak_8_at_HTR2B_5end | |description=CAGE_peak_8_at_HTR2B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000487!7.62e-08!2 | |ontology_enrichment_celltype=CL:1000487!7.62e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.59e-27;5!CL:0000349;2.05e-16;19!CL:0002541;3.24e-12;3!CL:0002138;8.73e-07;6 | |ontology_enrichment_celltype_v019=CL:0002537;1.59e-27;5!CL:0000349;2.05e-16;19!CL:0002541;3.24e-12;3!CL:0002138;8.73e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.59e-27,5;CL:0000349,2.05e-16,19;CL:0002541,3.24e-12,3;CL:0005020,8.48e-07,6;CL:0002138,8.48e-07,6;CL:0005022,8.48e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;8.73e-07;6 | |ontology_enrichment_development_v019=CL:0005022;8.73e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;9.87e-18;2 | |ontology_enrichment_disease_v019=DOID:1909;9.87e-18;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.07e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0005284!1.83e-07!5 | |ontology_enrichment_uberon=UBERON:0005284!1.83e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.27e-30;10!UBERON:0000158;2.27e-30;10!UBERON:0000305;5.35e-20;7!UBERON:0000478;3.63e-13;24!UBERON:0003124;3.24e-12;3!UBERON:0000920;3.24e-12;3 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.27e-30;10!UBERON:0000158;2.27e-30;10!UBERON:0000305;5.35e-20;7!UBERON:0000478;3.63e-13;24!UBERON:0003124;3.24e-12;3!UBERON:0000920;3.24e-12;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.79e-22,14;UBERON:0000158,5.79e-22,14;UBERON:0000305,5.35e-20,7;UBERON:0004871,1.22e-17,8;UBERON:0000478,3.63e-13,24;UBERON:0000920,3.24e-12,3 | |||
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| ||
|short_description=p8@HTR2B | |short_description=p8@HTR2B | ||
}} | }} |
Latest revision as of 07:20, 25 September 2015
Short description: | p8@HTR2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HTR2B_5end |
Coexpression cluster: | C940_Mesenchymal_Melanocyte_melanoma_chorionic_Fibroblast_mesenchymal_Endothelial |
Association with transcript: | -65bp_to_ENST00000540289_5end |
EntrezGene: | HTR2B |
HGNC: | 5294 |
UniProt: | F5GZU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.59e-27 | 5 |
extraembryonic cell | 2.05e-16 | 19 |
chorionic membrane mesenchymal stem cell | 3.24e-12 | 3 |
lymphangioblast | 8.48e-07 | 6 |
endothelial cell of lymphatic vessel | 8.48e-07 | 6 |
vascular lymphangioblast | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.79e-22 | 14 |
membranous layer | 5.79e-22 | 14 |
amnion | 5.35e-20 | 7 |
somatic layer of lateral plate mesoderm | 1.22e-17 | 8 |
extraembryonic structure | 3.63e-13 | 24 |
egg chorion | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.07e-17 | 2 |