FFCP PHASE1:Hg19::chr7:116139560..116139571,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:116139560..116139571,+
|short_description=p13@CAV2
|description=CAGE_peak_13_at_CAV2_5end
|association_with_transcript=-83bp_to_NM_001206747,NM_001233,NM_1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=858 | |EntrezGene=858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1528 | |HGNC=1528 | ||
|TSSclassifier=strong | |||
|UniProt=P51636,Q53X57 | |UniProt=P51636,Q53X57 | ||
|association_with_transcript=-83bp_to_NM_001206747,NM_001233,NM_198212_5end | |||
|cluster_id=chr7:116139560..116139571,+ | |||
|description=CAGE_peak_13_at_CAV2_5end | |||
|id=chr7:116139560..116139571,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.09e-09!254;CL:0002368!1.64e-07!13;CL:0000076!4.88e-07!62;CL:0002076!8.41e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002202;5.93e-15;9!CL:0002632;5.93e-15;9!CL:0002537;2.51e-12;5!CL:0002368;1.54e-10;13!CL:0000054;2.00e-08;2!CL:0000137;2.00e-08;2!CL:0000092;2.00e-08;2!CL:0000082;2.59e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,6.85e-15,9;CL:0002632,6.85e-15,9;CL:0002537,2.67e-12,5;CL:0002368,1.70e-10,13;CL:0000054,2.48e-08,2;CL:0000137,2.48e-08,2;CL:0000092,2.48e-08,2;CL:0000082,2.43e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.54e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;2.00e-08;2!DOID:4305;2.00e-08;2!DOID:3910;2.00e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.86e-08,2;DOID:200,2.48e-08,2;DOID:4305,2.48e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.54e-15;1!UBERON:0002082;1.54e-15;1!UBERON:0007196;3.30e-09;15!UBERON:0001558;3.30e-09;15!UBERON:0000305;4.56e-09;7!UBERON:0004903;2.00e-08;2!UBERON:0002173;2.00e-08;2!UBERON:0002186;2.00e-08;2!UBERON:0004802;2.59e-07;19!UBERON:0000115;2.59e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.16e-15,1;UBERON:0002082,1.16e-15,1;UBERON:0010226,1.16e-15,1;UBERON:0007196,3.59e-09,15;UBERON:0001558,3.59e-09,15;UBERON:0000305,4.76e-09,7;UBERON:0004903,1.86e-08,2;UBERON:0002173,1.86e-08,2;UBERON:0002186,1.86e-08,2;UBERON:0004871,5.00e-08,8;UBERON:0004802,2.43e-07,19;UBERON:0000115,2.43e-07,19;UBERON:0005178,5.11e-07,34;UBERON:0002224,5.11e-07,34;UBERON:0005181,8.02e-07,35 | |||
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| ||
|short_description=p13@CAV2 | |||
}} | }} |
Latest revision as of 07:18, 25 September 2015
Short description: | p13@CAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | -83bp_to_NM_001206747, NM_001233, NM_198212_5end |
EntrezGene: | CAV2 |
HGNC: | 1528 |
UniProt: | P51636Q53X57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 6.85e-15 | 9 |
epithelial cell of lower respiratory tract | 6.85e-15 | 9 |
amnion mesenchymal stem cell | 2.67e-12 | 5 |
respiratory epithelial cell | 1.70e-10 | 13 |
bone matrix secreting cell | 2.48e-08 | 2 |
osteocyte | 2.48e-08 | 2 |
osteoclast | 2.48e-08 | 2 |
epithelial cell of lung | 2.43e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.16e-15 | 1 |
cardiac ventricle | 1.16e-15 | 1 |
future cardiac ventricle | 1.16e-15 | 1 |
tracheobronchial tree | 3.59e-09 | 15 |
lower respiratory tract | 3.59e-09 | 15 |
amnion | 4.76e-09 | 7 |
bronchoalveolar duct junction | 1.86e-08 | 2 |
alveolar duct | 1.86e-08 | 2 |
bronchiole | 1.86e-08 | 2 |
somatic layer of lateral plate mesoderm | 5.00e-08 | 8 |
respiratory tract epithelium | 2.43e-07 | 19 |
lung epithelium | 2.43e-07 | 19 |
thoracic cavity element | 5.11e-07 | 34 |
thoracic cavity | 5.11e-07 | 34 |
thoracic segment organ | 8.02e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.86e-08 | 2 |
giant cell tumor | 2.48e-08 | 2 |
bone giant cell tumor | 2.48e-08 | 2 |