FFCP PHASE1:Hg19::chr9:130913926..130913932,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:130913926..130913932,+
|short_description=p4@LCN2
|description=CAGE_peak_4_at_LCN2_5end
|association_with_transcript=-15bp_to_ENST00000494317_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3934 | |EntrezGene=3934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6526 | |HGNC=6526 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000494317_5end | |||
|cluster_id=chr9:130913926..130913932,+ | |||
|coexpression_cluster_id=C484 | |||
|description=CAGE_peak_4_at_LCN2_5end | |||
|id=chr9:130913926..130913932,+ | |||
|ontology_enrichment_celltype=CL:0002178!8.95e-17!3;CL:0002076!1.22e-15!43;CL:0000223!1.21e-12!59;CL:0000066!1.39e-09!254;CL:0002149!1.18e-08!6;CL:0002255!1.18e-08!6;CL:0002231!3.08e-08!3;CL:1001319!8.49e-07!1;CL:1000600!8.49e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.22e-14;3!CL:0000239;1.96e-14;3!CL:1000615;1.96e-14;3!CL:0002306;1.96e-14;3!CL:0002076;4.34e-08;42!CL:0002149;7.01e-08;6!CL:0002255;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.22e-14,3;CL:0000239,1.83e-14,3;CL:1000615,1.83e-14,3;CL:0002306,1.83e-14,3;CL:0002076,2.66e-09,42;CL:0002149,7.25e-08,6;CL:0002255,7.25e-08,6;CL:0000223,6.14e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!1.02e-15!25;DOID:305!6.76e-14!106;DOID:4929!4.90e-11!2;DOID:0050687!3.03e-09!143;DOID:3001!1.18e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;7.01e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002294!3.92e-12!7;UBERON:0001173!3.92e-12!7;UBERON:0004912!3.92e-12!7;UBERON:0000341!6.85e-12!2;UBERON:0000077!3.77e-09!130;UBERON:0004119!4.44e-09!169;UBERON:0000925!4.44e-09!169;UBERON:0006595!4.44e-09!169;UBERON:0001007!5.11e-08!155;UBERON:0001555!5.11e-08!155;UBERON:0007026!5.11e-08!155;UBERON:0002110!1.09e-07!3;UBERON:0006242!1.09e-07!3;UBERON:0004921!5.31e-07!129;UBERON:0004185!5.31e-07!129;UBERON:0001046!7.85e-07!19;UBERON:0004645!8.49e-07!1;UBERON:0001256!8.49e-07!1;UBERON:0001259!8.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;4.21e-21;2!UBERON:0006853;1.96e-14;3!UBERON:0007685;1.96e-14;3!UBERON:0004134;1.96e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,1.83e-14,3;UBERON:0007685,1.83e-14,3;UBERON:0004134,1.83e-14,3 | |||
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|short_description=p4@LCN2 | |||
}} | }} |
Latest revision as of 07:16, 25 September 2015
Short description: | p4@LCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LCN2_5end |
Coexpression cluster: | C484_squamous_pharyngeal_bile_transitionalcell_Prostate_signet_trachea |
Association with transcript: | -15bp_to_ENST00000494317_5end |
EntrezGene: | LCN2 |
HGNC: | 6526 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.22e-14 | 3 |
brush border epithelial cell | 1.83e-14 | 3 |
kidney cortex tubule cell | 1.83e-14 | 3 |
epithelial cell of proximal tubule | 1.83e-14 | 3 |
endo-epithelial cell | 2.66e-09 | 42 |
epithelial cell of uterus | 7.25e-08 | 6 |
stromal cell of endometrium | 7.25e-08 | 6 |
endodermal cell | 6.14e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 1.83e-14 | 3 |
region of nephron tubule | 1.83e-14 | 3 |
proximal tubule | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 7.25e-08 | 6 |