FFCP PHASE1:Hg19::chr2:231988425..231988433,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3357 | |EntrezGene=3357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5294 | |HGNC=5294 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZU1 | |UniProt=F5GZU1 | ||
|association_with_transcript=44bp_to_ENST00000540289_5end | |association_with_transcript=44bp_to_ENST00000540289_5end | ||
|cluster_id=chr2:231988425..231988433,- | |||
|coexpression_cluster_id=C940 | |||
|description=CAGE_peak_11_at_HTR2B_5end | |description=CAGE_peak_11_at_HTR2B_5end | ||
|id=chr2:231988425..231988433,- | |id=chr2:231988425..231988433,- | ||
|ontology_enrichment_celltype=CL:0002549!6.23e-17!2;CL:0002537!1.98e-07!5 | |ontology_enrichment_celltype=CL:0002549!6.23e-17!2;CL:0002537!1.98e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.19e-53;5!CL:0002549;7.05e-34;2!CL:0000349;4.91e-15;19!CL:0000134;4.34e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.19e-53,5;CL:0002549,7.05e-34,2;CL:0000349,4.91e-15,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003947!6.23e-17!2;UBERON:0005629!6.23e-17!2;UBERON:0005358!6.23e-17!2;UBERON:0001886!6.23e-17!2;UBERON:0004086!6.23e-17!2;UBERON:0005282!6.23e-17!2;UBERON:0005281!6.23e-17!2;UBERON:0005284!6.91e-15!5;UBERON:0002300!1.34e-11!3;UBERON:0006834!2.60e-09!1;UBERON:0005631!2.93e-09!14;UBERON:0000158!2.93e-09!14;UBERON:0001301!5.31e-09!1;UBERON:0001282!6.72e-09!1;UBERON:0009842!6.72e-09!1;UBERON:0003704!6.72e-09!1;UBERON:0001171!6.72e-09!1;UBERON:0001172!6.72e-09!1;UBERON:0002200!4.99e-07!11;UBERON:0006876!4.99e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.49e-38;7!UBERON:0005629;7.05e-34;2!UBERON:0005358;7.05e-34;2!UBERON:0001886;7.05e-34;2!UBERON:0004086;7.05e-34;2!UBERON:0005282;7.05e-34;2!UBERON:0005281;7.05e-34;2!UBERON:0005631;2.08e-27;10!UBERON:0000158;2.08e-27;10!UBERON:0005284;1.83e-14;5!UBERON:0000478;3.75e-12;24!UBERON:0006876;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.49e-38,7;UBERON:0004871,6.50e-34,8;UBERON:0005629,7.05e-34,2;UBERON:0005358,7.05e-34,2;UBERON:0001886,7.05e-34,2;UBERON:0004086,7.05e-34,2;UBERON:0005282,7.05e-34,2;UBERON:0005281,7.05e-34,2;UBERON:0005631,5.89e-20,14;UBERON:0000158,5.89e-20,14;UBERON:0005284,1.83e-14,5;UBERON:0000478,3.75e-12,24;UBERON:0006876,2.63e-07,11 | |||
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|short_description=p11@HTR2B | |short_description=p11@HTR2B | ||
}} | }} |
Latest revision as of 07:15, 25 September 2015
Short description: | p11@HTR2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HTR2B_5end |
Coexpression cluster: | C940_Mesenchymal_Melanocyte_melanoma_chorionic_Fibroblast_mesenchymal_Endothelial |
Association with transcript: | 44bp_to_ENST00000540289_5end |
EntrezGene: | HTR2B |
HGNC: | 5294 |
UniProt: | F5GZU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.19e-53 | 5 |
fibroblast of choroid plexus | 7.05e-34 | 2 |
extraembryonic cell | 4.91e-15 | 19 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.49e-38 | 7 |
somatic layer of lateral plate mesoderm | 6.50e-34 | 8 |
vascular plexus | 7.05e-34 | 2 |
ventricle of nervous system | 7.05e-34 | 2 |
choroid plexus | 7.05e-34 | 2 |
brain ventricle | 7.05e-34 | 2 |
ventricular system of brain | 7.05e-34 | 2 |
ventricular system of central nervous system | 7.05e-34 | 2 |
extraembryonic membrane | 5.89e-20 | 14 |
membranous layer | 5.89e-20 | 14 |
brain vasculature | 1.83e-14 | 5 |
extraembryonic structure | 3.75e-12 | 24 |
vasculature of organ | 2.63e-07 | 11 |