FFCP PHASE1:Hg19::chr3:146262352..146262363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5359 | |EntrezGene=5359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9092 | |HGNC=9092 | ||
|TSSclassifier=strong | |||
|UniProt=C9J9P4 | |UniProt=C9J9P4 | ||
|association_with_transcript=0bp_to_ENST00000462666_5end | |association_with_transcript=0bp_to_ENST00000462666_5end | ||
|cluster_id=chr3:146262352..146262363,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_5_at_PLSCR1_5end | |description=CAGE_peak_5_at_PLSCR1_5end | ||
|id=chr3:146262352..146262363,- | |id=chr3:146262352..146262363,- | ||
|ontology_enrichment_celltype=CL:0002057!1.12e-22!42;CL:0000860!3.55e-22!45;CL:0002194!2.15e-18!63;CL:0000576!2.15e-18!63;CL:0000040!2.15e-18!63;CL:0000559!2.15e-18!63;CL:0002009!2.70e-18!65;CL:0000766!5.87e-17!76;CL:0000557!6.37e-15!71;CL:0000839!1.52e-14!70;CL:0000763!9.79e-11!112;CL:0000049!9.79e-11!112 | |ontology_enrichment_celltype=CL:0002057!1.12e-22!42;CL:0000860!3.55e-22!45;CL:0002194!2.15e-18!63;CL:0000576!2.15e-18!63;CL:0000040!2.15e-18!63;CL:0000559!2.15e-18!63;CL:0002009!2.70e-18!65;CL:0000766!5.87e-17!76;CL:0000557!6.37e-15!71;CL:0000839!1.52e-14!70;CL:0000763!9.79e-11!112;CL:0000049!9.79e-11!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.08e-23;33!CL:0002057;5.08e-23;33!CL:0000473;4.00e-21;39!CL:0000234;4.00e-21;39!CL:0000576;1.03e-15;48!CL:0000766;1.05e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.62e-27,48;CL:0000234,1.62e-27,48;CL:0000860,2.67e-25,42;CL:0002057,2.67e-25,42;CL:0002194,3.09e-22,59;CL:0000576,3.09e-22,59;CL:0000040,3.09e-22,59;CL:0000559,3.09e-22,59;CL:0002009,1.10e-21,61;CL:0000766,1.98e-21,72;CL:0000557,1.20e-18,67;CL:0000839,2.20e-18,66;CL:0000763,1.56e-11,108;CL:0000049,1.56e-11,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-18;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.23e-14!112;UBERON:0002405!4.25e-14!115;UBERON:0002390!5.88e-14!102;UBERON:0003061!5.88e-14!102;UBERON:0002371!1.59e-12!80;UBERON:0007023!2.20e-12!115;UBERON:0001474!2.02e-10!86;UBERON:0000062!3.03e-09!511;UBERON:0004765!7.30e-09!101;UBERON:0001434!7.30e-09!101;UBERON:0000923!3.76e-07!604;UBERON:0005291!3.76e-07!604;UBERON:0006598!3.76e-07!604;UBERON:0002532!3.76e-07!604;UBERON:0000467!5.31e-07!625;UBERON:0002050!6.30e-07!605;UBERON:0005423!6.30e-07!605;UBERON:0000480!8.92e-07!626 | |ontology_enrichment_uberon=UBERON:0002193!1.23e-14!112;UBERON:0002405!4.25e-14!115;UBERON:0002390!5.88e-14!102;UBERON:0003061!5.88e-14!102;UBERON:0002371!1.59e-12!80;UBERON:0007023!2.20e-12!115;UBERON:0001474!2.02e-10!86;UBERON:0000062!3.03e-09!511;UBERON:0004765!7.30e-09!101;UBERON:0001434!7.30e-09!101;UBERON:0000923!3.76e-07!604;UBERON:0005291!3.76e-07!604;UBERON:0006598!3.76e-07!604;UBERON:0002532!3.76e-07!604;UBERON:0000467!5.31e-07!625;UBERON:0002050!6.30e-07!605;UBERON:0005423!6.30e-07!605;UBERON:0000480!8.92e-07!626 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.12e-17,108;UBERON:0002390,1.04e-16,98;UBERON:0003061,1.04e-16,98;UBERON:0002405,4.33e-16,93;UBERON:0002371,1.38e-15,76;UBERON:0004765,3.60e-13,90;UBERON:0001474,3.95e-13,82;UBERON:0007023,6.01e-12,114;UBERON:0001434,5.72e-11,100;UBERON:0003081,2.21e-07,203;UBERON:0002050,3.56e-07,564;UBERON:0005423,3.72e-07,581;UBERON:0000923,5.36e-07,560;UBERON:0010316,5.36e-07,560;UBERON:0005291,5.36e-07,560;UBERON:0006598,5.36e-07,560;UBERON:0010317,5.36e-07,560;UBERON:0002532,5.36e-07,560 | |||
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| ||
|short_description=p5@PLSCR1 | |short_description=p5@PLSCR1 | ||
}} | }} |
Latest revision as of 07:03, 25 September 2015
Short description: | p5@PLSCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLSCR1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000462666_5end |
EntrezGene: | PLSCR1 |
HGNC: | 9092 |
UniProt: | C9J9P4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.62e-27 | 48 |
phagocyte | 1.62e-27 | 48 |
classical monocyte | 2.67e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.67e-25 | 42 |
monopoietic cell | 3.09e-22 | 59 |
monocyte | 3.09e-22 | 59 |
monoblast | 3.09e-22 | 59 |
promonocyte | 3.09e-22 | 59 |
macrophage dendritic cell progenitor | 1.10e-21 | 61 |
myeloid leukocyte | 1.98e-21 | 72 |
granulocyte monocyte progenitor cell | 1.20e-18 | 67 |
myeloid lineage restricted progenitor cell | 2.20e-18 | 66 |
myeloid cell | 1.56e-11 | 108 |
common myeloid progenitor | 1.56e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.12e-17 | 108 |
hematopoietic system | 1.04e-16 | 98 |
blood island | 1.04e-16 | 98 |
immune system | 4.33e-16 | 93 |
bone marrow | 1.38e-15 | 76 |
skeletal element | 3.60e-13 | 90 |
bone element | 3.95e-13 | 82 |
adult organism | 6.01e-12 | 114 |
skeletal system | 5.72e-11 | 100 |
lateral plate mesoderm | 2.21e-07 | 203 |
embryonic structure | 3.56e-07 | 564 |
developing anatomical structure | 3.72e-07 | 581 |
germ layer | 5.36e-07 | 560 |
germ layer / neural crest | 5.36e-07 | 560 |
embryonic tissue | 5.36e-07 | 560 |
presumptive structure | 5.36e-07 | 560 |
germ layer / neural crest derived structure | 5.36e-07 | 560 |
epiblast (generic) | 5.36e-07 | 560 |